RNA–Protein interactions for RNA: ENST00000490163.5

UBXN4-208, Transcript of UBX domain protein 4, humanhuman

TSL 2

Gene UBXN4, Length 3,394 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-208ENST00000490163 JTBO76095 146 aa2.74□□□□□ -1.97
UBXN4-208ENST00000490163 RAF1P04049 648 aa2.74□□□□□ -1.97
UBXN4-208ENST00000490163 CYP2D6P10635 497 aa2.74□□□□□ -1.97
UBXN4-208ENST00000490163 CYP2A7P20853 494 aa2.74□□□□□ -1.97
UBXN4-208ENST00000490163 POU1F1P28069 291 aa2.74□□□□□ -1.97
UBXN4-208ENST00000490163 MAGEB1P43366 347 aa2.74□□□□□ -1.97
UBXN4-208ENST00000490163 RARRES1P49788 294 aa2.74□□□□□ -1.97
UBXN4-208ENST00000490163 CCZ1BP86790 482 aa2.74□□□□□ -1.97
UBXN4-208ENST00000490163 CCZ1P86791 482 aaPredicted RBP2.74□□□□□ -1.97
UBXN4-208ENST00000490163 GALK2Q01415 458 aa2.74□□□□□ -1.97
UBXN4-208ENST00000490163 EFEMP1Q12805 493 aa2.74□□□□□ -1.97
UBXN4-208ENST00000490163 MRPL28Q13084 256 aaKnown RBP2.74□□□□□ -1.97
UBXN4-208ENST00000490163 ZBTB17Q13105 803 aa2.74□□□□□ -1.97
UBXN4-208ENST00000490163 MIIPQ5JXC2 388 aa2.74□□□□□ -1.97
UBXN4-208ENST00000490163 CEP85Q6P2H3 762 aa2.74□□□□□ -1.97
UBXN4-208ENST00000490163 DPY19L3Q6ZPD9 716 aa2.74□□□□□ -1.97
UBXN4-208ENST00000490163 TMPRSS11BQ86T26 416 aa2.74□□□□□ -1.97
UBXN4-208ENST00000490163 ITPRIPQ8IWB1 547 aa2.74□□□□□ -1.97
UBXN4-208ENST00000490163 SLC25A41Q8N5S1 370 aa2.74□□□□□ -1.97
UBXN4-208ENST00000490163 AADATQ8N5Z0 425 aa2.74□□□□□ -1.97
UBXN4-208ENST00000490163 OR8K3Q8NH51 312 aa2.74□□□□□ -1.97
UBXN4-208ENST00000490163 SPATA22Q8NHS9 363 aa2.74□□□□□ -1.97
UBXN4-208ENST00000490163 FAM81AQ8TBF8 368 aa2.74□□□□□ -1.97
UBXN4-208ENST00000490163 TRAF3IP1Q8TDR0 691 aaPredicted RBP2.74□□□□□ -1.97
UBXN4-208ENST00000490163 GGHQ92820 318 aa2.74□□□□□ -1.97
UBXN4-208ENST00000490163 INPP5DQ92835 1189 aa2.74□□□□□ -1.97
UBXN4-208ENST00000490163 TMEM18Q96B42 140 aa2.74□□□□□ -1.97
UBXN4-208ENST00000490163 FAM71F1Q96KD3 344 aaPredicted RBP2.74□□□□□ -1.97
UBXN4-208ENST00000490163 FAM84BQ96KN1 310 aaPredicted RBP2.74□□□□□ -1.97
UBXN4-208ENST00000490163 SEPHS2Q99611 448 aa2.74□□□□□ -1.97
UBXN4-208ENST00000490163 RAB11FIP5Q9BXF6 653 aa2.74□□□□□ -1.97
UBXN4-208ENST00000490163 GPR87Q9BY21 358 aa2.74□□□□□ -1.97
UBXN4-208ENST00000490163 TSGA10Q9BZW7 698 aa2.74□□□□□ -1.97
UBXN4-208ENST00000490163 DDX18Q9NVP1 670 aaKnown RBP2.74□□□□□ -1.97
UBXN4-208ENST00000490163 ARL15Q9NXU5 204 aa2.74□□□□□ -1.97
UBXN4-208ENST00000490163 DHDHQ9UQ10 334 aa2.74□□□□□ -1.97
UBXN4-208ENST00000490163 NAALAD2Q9Y3Q0 740 aa2.74□□□□□ -1.97
UBXN4-208ENST00000490163 MEGF6O75095 1541 aa2.74□□□□□ -1.97
UBXN4-208ENST00000490163 TTC41PQ6P2S7 1318 aa2.74□□□□□ -1.97
UBXN4-208ENST00000490163 TEX13DA0A0J9YY54 714 aaPredicted RBP2.74□□□□□ -1.97
UBXN4-208ENST00000490163 USP27XA6NNY8 438 aa2.74□□□□□ -1.97
UBXN4-208ENST00000490163 C4orf47A7E2U8 309 aa2.74□□□□□ -1.97
UBXN4-208ENST00000490163 J3QR06 171 aa2.74□□□□□ -1.97
UBXN4-208ENST00000490163 HSPA12AO43301 675 aa2.74□□□□□ -1.97
UBXN4-208ENST00000490163 PLPP2O43688 288 aa2.74□□□□□ -1.97
UBXN4-208ENST00000490163 TOM1L1O75674 476 aa2.74□□□□□ -1.97
UBXN4-208ENST00000490163 STK17BO94768 372 aa2.74□□□□□ -1.97
UBXN4-208ENST00000490163 MT-ATP6P00846 226 aa2.74□□□□□ -1.97
UBXN4-208ENST00000490163 VTNP04004 478 aa2.74□□□□□ -1.97
UBXN4-208ENST00000490163 PDHA1P08559 390 aa2.74□□□□□ -1.97
UBXN4-208ENST00000490163 CHRNB1P11230 501 aa2.74□□□□□ -1.97
UBXN4-208ENST00000490163 CCDC130P13994 396 aa2.74□□□□□ -1.97
UBXN4-208ENST00000490163 CCND3P30281 292 aaPredicted RBP2.74□□□□□ -1.97
UBXN4-208ENST00000490163 TNFSF8P32971 234 aa2.74□□□□□ -1.97
UBXN4-208ENST00000490163 HNRNPFP52597 415 aaKnown RBP2.74□□□□□ -1.97
UBXN4-208ENST00000490163 OVGP1Q12889 678 aa2.74□□□□□ -1.97
UBXN4-208ENST00000490163 STIM1Q13586 685 aa2.74□□□□□ -1.97
UBXN4-208ENST00000490163 CDSNQ15517 529 aa2.74□□□□□ -1.97
UBXN4-208ENST00000490163 LETM2Q2VYF4 491 aa2.74□□□□□ -1.97
UBXN4-208ENST00000490163 LRRC38Q5VT99 294 aa2.74□□□□□ -1.97
UBXN4-208ENST00000490163 DZIP1Q86YF9 867 aaKnown RBP2.74□□□□□ -1.97
UBXN4-208ENST00000490163 CCDC83Q8IWF9 413 aa2.74□□□□□ -1.97
UBXN4-208ENST00000490163 LRRC8AQ8IWT6 810 aa2.74□□□□□ -1.97
UBXN4-208ENST00000490163 GPALPP1Q8IXQ4 340 aa2.74□□□□□ -1.97
UBXN4-208ENST00000490163 CFAP206Q8IYR0 622 aa2.74□□□□□ -1.97
UBXN4-208ENST00000490163 SPEM1Q8N4L4 309 aa2.74□□□□□ -1.97
UBXN4-208ENST00000490163 PQLC3Q8N755 202 aa2.74□□□□□ -1.97
UBXN4-208ENST00000490163 BANPQ8N9N5 519 aa2.74□□□□□ -1.97
UBXN4-208ENST00000490163 TERB1Q8NA31 727 aa2.74□□□□□ -1.97
UBXN4-208ENST00000490163 NPEPL1Q8NDH3 523 aa2.74□□□□□ -1.97
UBXN4-208ENST00000490163 NFAM1Q8NET5 270 aaPredicted RBP2.74□□□□□ -1.97
UBXN4-208ENST00000490163 OR5R1Q8NH85 324 aa2.74□□□□□ -1.97
UBXN4-208ENST00000490163 DYDC1Q8WWB3 177 aa2.74□□□□□ -1.97
UBXN4-208ENST00000490163 TPD52L3Q96J77 140 aa2.74□□□□□ -1.97
UBXN4-208ENST00000490163 FCRL5Q96RD9 977 aa2.74□□□□□ -1.97
UBXN4-208ENST00000490163 NUDCD1Q96RS6 583 aa2.74□□□□□ -1.97
UBXN4-208ENST00000490163 HAUS8Q9BT25 410 aa2.74□□□□□ -1.97
UBXN4-208ENST00000490163 KRTAP4-9Q9BYQ8 210 aa2.74□□□□□ -1.97
UBXN4-208ENST00000490163 GPR61Q9BZJ8 451 aa2.74□□□□□ -1.97
UBXN4-208ENST00000490163 YIPF3Q9GZM5 350 aa2.74□□□□□ -1.97
UBXN4-208ENST00000490163 UTP6Q9NYH9 597 aaKnown RBP2.74□□□□□ -1.97
UBXN4-208ENST00000490163 FBXW2Q9UKT8 454 aa2.74□□□□□ -1.97
UBXN4-208ENST00000490163 HMCN1Q96RW7 5635 aa2.74□□□□□ -1.97
UBXN4-208ENST00000490163 SF3B1O75533 1304 aaKnown RBP eCLIP2.74□□□□□ -1.973e-6■■■■■ 137.9
UBXN4-208ENST00000490163 ACEP12821 1306 aa2.74□□□□□ -1.97
UBXN4-208ENST00000490163 DUOX1Q9NRD9 1551 aa2.74□□□□□ -1.97
UBXN4-208ENST00000490163 LOC100653049A0A140TA62 436 aa2.74□□□□□ -1.97
UBXN4-208ENST00000490163 MTMR11A4FU01 709 aa2.74□□□□□ -1.97
UBXN4-208ENST00000490163 ARHGAP42A6NI28 874 aa2.74□□□□□ -1.97
UBXN4-208ENST00000490163 ZSCAN12O43309 604 aa2.74□□□□□ -1.97
UBXN4-208ENST00000490163 KIF5CO60282 957 aa2.74□□□□□ -1.97
UBXN4-208ENST00000490163 ATP6V1G1O75348 118 aa2.74□□□□□ -1.97
UBXN4-208ENST00000490163 KRT34O76011 436 aa2.74□□□□□ -1.97
UBXN4-208ENST00000490163 PIGNO95427 931 aa2.74□□□□□ -1.97
UBXN4-208ENST00000490163 RPSAP08865 295 aaKnown RBP2.74□□□□□ -1.97
UBXN4-208ENST00000490163 POLR2MP0CAP2 368 aa2.74□□□□□ -1.97
UBXN4-208ENST00000490163 FGF5P12034 268 aa2.74□□□□□ -1.97
UBXN4-208ENST00000490163 CPN1P15169 458 aa2.74□□□□□ -1.97
UBXN4-208ENST00000490163 OR3A3P47888 321 aa2.74□□□□□ -1.97
UBXN4-208ENST00000490163 PRELPP51888 382 aa2.74□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms