RNA–Protein interactions for RNA: ENST00000489656.5

VPS26A-205, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5

Gene VPS26A, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-205ENST00000489656 KCNC2Q96PR1 638 aa13.49□□□□□ -0.25
VPS26A-205ENST00000489656 DPYSL5Q9BPU6 564 aa13.49□□□□□ -0.25
VPS26A-205ENST00000489656 LRFN3Q9BTN0 628 aa13.49□□□□□ -0.25
VPS26A-205ENST00000489656 TBCDQ9BTW9 1192 aa13.49□□□□□ -0.25
VPS26A-205ENST00000489656 EBPLQ9BY08 206 aa13.49□□□□□ -0.25
VPS26A-205ENST00000489656 ENAMQ9NRM1 1142 aa13.49□□□□□ -0.25
VPS26A-205ENST00000489656 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.49□□□□□ -0.25
VPS26A-205ENST00000489656 NDE1Q9NXR1 346 aa13.49□□□□□ -0.25
VPS26A-205ENST00000489656 FRYLO94915 3013 aa13.49□□□□□ -0.25
VPS26A-205ENST00000489656 GPR179Q6PRD1 2367 aa13.48□□□□□ -0.25
VPS26A-205ENST00000489656 GNG14A0A1W2PPG7 69 aa13.48□□□□□ -0.25
VPS26A-205ENST00000489656 CFAP73A6NFT4 308 aa13.48□□□□□ -0.25
VPS26A-205ENST00000489656 URADA6NGE7 173 aa13.48□□□□□ -0.25
VPS26A-205ENST00000489656 H0YGG7 62 aa13.48□□□□□ -0.25
VPS26A-205ENST00000489656 TXNDC9O14530 226 aa13.48□□□□□ -0.25
VPS26A-205ENST00000489656 ANGPT2O15123 496 aa13.48□□□□□ -0.25
VPS26A-205ENST00000489656 TOX3O15405 576 aaPredicted RBP13.48□□□□□ -0.25
VPS26A-205ENST00000489656 CFLARO15519 480 aa13.48□□□□□ -0.25
VPS26A-205ENST00000489656 ZSCAN9O15535 394 aaPredicted RBP13.48□□□□□ -0.25
VPS26A-205ENST00000489656 P2RX6O15547 441 aa13.48□□□□□ -0.25
VPS26A-205ENST00000489656 SRPX2O60687 465 aaPredicted RBP13.48□□□□□ -0.25
VPS26A-205ENST00000489656 PRAMEF10O60809 474 aa13.48□□□□□ -0.25
VPS26A-205ENST00000489656 ZBTB11O95625 1053 aaPredicted RBP13.48□□□□□ -0.25
VPS26A-205ENST00000489656 IL6P05231 212 aa13.48□□□□□ -0.25
VPS26A-205ENST00000489656 KLK1P06870 262 aa13.48□□□□□ -0.25
VPS26A-205ENST00000489656 MYF5P13349 255 aa13.48□□□□□ -0.25
VPS26A-205ENST00000489656 CSF2RBP32927 897 aa13.48□□□□□ -0.25
VPS26A-205ENST00000489656 RPL3P39023 403 aaKnown RBP13.48□□□□□ -0.25
VPS26A-205ENST00000489656 GABRA4P48169 554 aa13.48□□□□□ -0.25
VPS26A-205ENST00000489656 ARF3P61204 181 aaPredicted RBP13.48□□□□□ -0.25
VPS26A-205ENST00000489656 TLR1Q15399 786 aa13.48□□□□□ -0.25
VPS26A-205ENST00000489656 PERM1Q5SV97 790 aa13.48□□□□□ -0.25
VPS26A-205ENST00000489656 FRMPD2BQ6IN97 320 aa13.48□□□□□ -0.25
VPS26A-205ENST00000489656 TRIM40Q6P9F5 258 aa13.48□□□□□ -0.25
VPS26A-205ENST00000489656 FAM92BQ6ZTR7 304 aa13.48□□□□□ -0.25
VPS26A-205ENST00000489656 CAMKMTQ7Z624 323 aa13.48□□□□□ -0.25
VPS26A-205ENST00000489656 KMT5CQ86Y97 462 aa13.48□□□□□ -0.25
VPS26A-205ENST00000489656 ZCCHC7Q8N3Z6 543 aaKnown RBP13.48□□□□□ -0.25
VPS26A-205ENST00000489656 DPP10Q8N608 796 aa13.48□□□□□ -0.25
VPS26A-205ENST00000489656 KRTCAP2Q8N6L1 136 aa13.48□□□□□ -0.25
VPS26A-205ENST00000489656 Q8N9G6 341 aaPredicted RBP13.48□□□□□ -0.25
VPS26A-205ENST00000489656 PCYOX1LQ8NBM8 494 aa13.48□□□□□ -0.25
VPS26A-205ENST00000489656 PRSS33Q8NF86 280 aa13.48□□□□□ -0.25
VPS26A-205ENST00000489656 CLHC1Q8NHS4 586 aa13.48□□□□□ -0.25
VPS26A-205ENST00000489656 FBXO27Q8NI29 283 aa13.48□□□□□ -0.25
VPS26A-205ENST00000489656 C16orf78Q8WTQ4 265 aa13.48□□□□□ -0.25
VPS26A-205ENST00000489656 ROPN1LQ96C74 230 aa13.48□□□□□ -0.25
VPS26A-205ENST00000489656 MTERF3Q96E29 417 aa13.48□□□□□ -0.25
VPS26A-205ENST00000489656 ZNF764Q96H86 408 aaPredicted RBP13.48□□□□□ -0.25
VPS26A-205ENST00000489656 SLC45A3Q96JT2 553 aa13.48□□□□□ -0.25
VPS26A-205ENST00000489656 EGLN2Q96KS0 407 aa13.48□□□□□ -0.25
VPS26A-205ENST00000489656 FCRL4Q96PJ5 515 aa13.48□□□□□ -0.25
VPS26A-205ENST00000489656 KLHL25Q9H0H3 589 aa13.48□□□□□ -0.25
VPS26A-205ENST00000489656 KLHL31Q9H511 634 aa13.48□□□□□ -0.25
VPS26A-205ENST00000489656 FAM60AQ9NP50 221 aa13.48□□□□□ -0.25
VPS26A-205ENST00000489656 PRDM7Q9NQW5 492 aa13.48□□□□□ -0.25
VPS26A-205ENST00000489656 PDP2Q9P2J9 529 aa13.48□□□□□ -0.25
VPS26A-205ENST00000489656 LEF1Q9UJU2 399 aaPredicted RBP13.48□□□□□ -0.25
VPS26A-205ENST00000489656 OTOGLQ3ZCN5 2332 aa13.47□□□□□ -0.25
VPS26A-205ENST00000489656 NUP210LQ5VU65 1888 aa13.47□□□□□ -0.25
VPS26A-205ENST00000489656 LOC105369274A0A096LPK9 316 aa13.47□□□□□ -0.25
VPS26A-205ENST00000489656 A0A0A6YYD5 115 aa13.47□□□□□ -0.25
VPS26A-205ENST00000489656 IGHV5-51A0A0C4DH38 117 aa13.47□□□□□ -0.25
VPS26A-205ENST00000489656 LOC102723532A0A0G2JNH3 316 aa13.47□□□□□ -0.25
VPS26A-205ENST00000489656 CPED1A4D0V7 1026 aa13.47□□□□□ -0.25
VPS26A-205ENST00000489656 ASPDHA6ND91 283 aa13.47□□□□□ -0.25
VPS26A-205ENST00000489656 CCDC154A6NI56 674 aa13.47□□□□□ -0.25
VPS26A-205ENST00000489656 C4orf51C9J302 202 aa13.47□□□□□ -0.25
VPS26A-205ENST00000489656 MRASO14807 208 aa13.47□□□□□ -0.25
VPS26A-205ENST00000489656 AIM2O14862 343 aa13.47□□□□□ -0.25
VPS26A-205ENST00000489656 SCAMP2O15127 329 aaKnown RBP13.47□□□□□ -0.25
VPS26A-205ENST00000489656 GYG2O15488 501 aa13.47□□□□□ -0.25
VPS26A-205ENST00000489656 FLRT2O43155 660 aa13.47□□□□□ -0.25
VPS26A-205ENST00000489656 ERI3O43414 337 aaKnown RBP13.47□□□□□ -0.25
VPS26A-205ENST00000489656 KIF1CO43896 1103 aaKnown RBP13.47□□□□□ -0.25
VPS26A-205ENST00000489656 TBX19O60806 448 aa13.47□□□□□ -0.25
VPS26A-205ENST00000489656 LRP3O75074 770 aa13.47□□□□□ -0.25
VPS26A-205ENST00000489656 NPPAP01160 153 aa13.47□□□□□ -0.25
VPS26A-205ENST00000489656 KRT16P08779 473 aa13.47□□□□□ -0.25
VPS26A-205ENST00000489656 MSL3P1P0C860 447 aa13.47□□□□□ -0.25
VPS26A-205ENST00000489656 ITGAXP20702 1163 aa13.47□□□□□ -0.25
VPS26A-205ENST00000489656 HPCAL1P37235 193 aa13.47□□□□□ -0.25
VPS26A-205ENST00000489656 SSR2P43308 183 aa13.47□□□□□ -0.25
VPS26A-205ENST00000489656 NUDT2P50583 147 aa13.47□□□□□ -0.25
VPS26A-205ENST00000489656 SRSF11Q05519 484 aaKnown RBP13.47□□□□□ -0.25
VPS26A-205ENST00000489656 SLC14A1Q13336 389 aa13.47□□□□□ -0.25
VPS26A-205ENST00000489656 PDE7AQ13946 482 aa13.47□□□□□ -0.25
VPS26A-205ENST00000489656 UGT8Q16880 541 aa13.47□□□□□ -0.25
VPS26A-205ENST00000489656 MMEL1Q495T6 779 aa13.47□□□□□ -0.25
VPS26A-205ENST00000489656 VPS26BQ4G0F5 336 aa13.47□□□□□ -0.25
VPS26A-205ENST00000489656 CCNYL2Q5T2Q4 361 aa13.47□□□□□ -0.25
VPS26A-205ENST00000489656 FAM71E1Q6IPT2 247 aa13.47□□□□□ -0.25
VPS26A-205ENST00000489656 TMEM71Q6P5X7 295 aa13.47□□□□□ -0.25
VPS26A-205ENST00000489656 ZNF793Q6ZN11 406 aa13.47□□□□□ -0.25
VPS26A-205ENST00000489656 RETREG3Q86VR2 466 aa13.47□□□□□ -0.25
VPS26A-205ENST00000489656 DSELQ8IZU8 1212 aa13.47□□□□□ -0.25
VPS26A-205ENST00000489656 OR4N4Q8N0Y3 316 aa13.47□□□□□ -0.25
VPS26A-205ENST00000489656 OR8J2Q8NGG1 315 aa13.47□□□□□ -0.25
VPS26A-205ENST00000489656 UTP15Q8TED0 518 aaKnown RBP13.47□□□□□ -0.25
VPS26A-205ENST00000489656 TEFMQ96QE5 360 aaKnown RBP13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms