RNA–Protein interactions for RNA: ENST00000489563.1

AC055855.1-201, humanhuman

BASIC

Gene AC055855.1, Length 579 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055855.1-201ENST00000489563 PODNL1Q6PEZ8 512 aa3.04□□□□□ -1.92
AC055855.1-201ENST00000489563 COX8CQ7Z4L0 72 aa3.04□□□□□ -1.92
AC055855.1-201ENST00000489563 C5orf24Q7Z6I8 188 aa3.04□□□□□ -1.92
AC055855.1-201ENST00000489563 CCDC170Q8IYT3 715 aa3.04□□□□□ -1.92
AC055855.1-201ENST00000489563 FAM9BQ8IZU0 186 aa3.04□□□□□ -1.92
AC055855.1-201ENST00000489563 NUP93Q8N1F7 819 aa3.04□□□□□ -1.92
AC055855.1-201ENST00000489563 ZNF614Q8N883 585 aa3.04□□□□□ -1.92
AC055855.1-201ENST00000489563 GOLGA6L2Q8N9W4 650 aaPredicted RBP3.04□□□□□ -1.92
AC055855.1-201ENST00000489563 FIBINQ8TAL6 211 aa3.04□□□□□ -1.92
AC055855.1-201ENST00000489563 KRT12Q99456 494 aa3.04□□□□□ -1.92
AC055855.1-201ENST00000489563 IL12RB2Q99665 862 aa3.04□□□□□ -1.92
AC055855.1-201ENST00000489563 CUEDC2Q9H467 287 aa3.04□□□□□ -1.92
AC055855.1-201ENST00000489563 BARHL2Q9NY43 387 aa3.04□□□□□ -1.92
AC055855.1-201ENST00000489563 MDFICQ9P1T7 246 aa3.04□□□□□ -1.92
AC055855.1-201ENST00000489563 TMEM181Q9P2C4 612 aa3.04□□□□□ -1.92
AC055855.1-201ENST00000489563 ERRFI1Q9UJM3 462 aaPredicted RBP3.04□□□□□ -1.92
AC055855.1-201ENST00000489563 GPR132Q9UNW8 380 aa3.04□□□□□ -1.92
AC055855.1-201ENST00000489563 CSNK1G3Q9Y6M4 447 aa3.04□□□□□ -1.92
AC055855.1-201ENST00000489563 RANBP2P49792 3224 aaKnown RBP3.04□□□□□ -1.92
AC055855.1-201ENST00000489563 KIAA1217Q5T5P2 1943 aa3.03□□□□□ -1.92
AC055855.1-201ENST00000489563 UHRF1BP1Q6BDS2 1440 aa3.03□□□□□ -1.92
AC055855.1-201ENST00000489563 SPTBN4Q9H254 2564 aa3.03□□□□□ -1.92
AC055855.1-201ENST00000489563 IGLV7-46A0A075B6I9 117 aa3.03□□□□□ -1.92
AC055855.1-201ENST00000489563 ANTXRLA6NF34 631 aa3.03□□□□□ -1.92
AC055855.1-201ENST00000489563 ACSL4O60488 711 aa3.03□□□□□ -1.92
AC055855.1-201ENST00000489563 DUS4LO95620 317 aaKnown RBP3.03□□□□□ -1.92
AC055855.1-201ENST00000489563 SLC16A8O95907 504 aa3.03□□□□□ -1.92
AC055855.1-201ENST00000489563 MT-ND2P03891 347 aa3.03□□□□□ -1.92
AC055855.1-201ENST00000489563 RNF224P0DH78 156 aa3.03□□□□□ -1.92
AC055855.1-201ENST00000489563 TYMPP19971 482 aa3.03□□□□□ -1.92
AC055855.1-201ENST00000489563 PRKACGP22612 351 aa3.03□□□□□ -1.92
AC055855.1-201ENST00000489563 SNU13P55769 128 aaKnown RBP3.03□□□□□ -1.92
AC055855.1-201ENST00000489563 ASIC1P78348 528 aa3.03□□□□□ -1.92
AC055855.1-201ENST00000489563 SRSF9Q13242 221 aaKnown RBP eCLIP3.03□□□□□ -1.92
AC055855.1-201ENST00000489563 TRA2AQ13595 282 aaKnown RBP eCLIP3.03□□□□□ -1.92
AC055855.1-201ENST00000489563 RCN2Q14257 317 aa3.03□□□□□ -1.92
AC055855.1-201ENST00000489563 MTF1Q14872 753 aa3.03□□□□□ -1.92
AC055855.1-201ENST00000489563 SMU1Q2TAY7 513 aa3.03□□□□□ -1.92
AC055855.1-201ENST00000489563 ARMCX4Q5H9R4 360 aa3.03□□□□□ -1.92
AC055855.1-201ENST00000489563 GLRA4Q5JXX5 417 aa3.03□□□□□ -1.92
AC055855.1-201ENST00000489563 ATP1A1-AS1Q5TC04 95 aa3.03□□□□□ -1.92
AC055855.1-201ENST00000489563 LRRC38Q5VT99 294 aa3.03□□□□□ -1.92
AC055855.1-201ENST00000489563 CES4AQ5XG92 561 aa3.03□□□□□ -1.92
AC055855.1-201ENST00000489563 PM20D1Q6GTS8 502 aa3.03□□□□□ -1.92
AC055855.1-201ENST00000489563 KLHL10Q6JEL2 608 aa3.03□□□□□ -1.92
AC055855.1-201ENST00000489563 IYDQ6PHW0 289 aa3.03□□□□□ -1.92
AC055855.1-201ENST00000489563 AMER3Q8N944 861 aa3.03□□□□□ -1.92
AC055855.1-201ENST00000489563 ZNF519Q8TB69 540 aa3.03□□□□□ -1.92
AC055855.1-201ENST00000489563 SLCO2A1Q92959 643 aa3.03□□□□□ -1.92
AC055855.1-201ENST00000489563 OMA1Q96E52 524 aa3.03□□□□□ -1.92
AC055855.1-201ENST00000489563 CDKN2AIPNLQ96HQ2 116 aa3.03□□□□□ -1.92
AC055855.1-201ENST00000489563 PRMT1Q99873 361 aaKnown RBP3.03□□□□□ -1.92
AC055855.1-201ENST00000489563 ZNF350Q9GZX5 532 aa3.03□□□□□ -1.92
AC055855.1-201ENST00000489563 HOXD1Q9GZZ0 328 aa3.03□□□□□ -1.92
AC055855.1-201ENST00000489563 C2orf40Q9H1Z8 148 aa3.03□□□□□ -1.92
AC055855.1-201ENST00000489563 C5orf66Q9H5L9 145 aa3.03□□□□□ -1.92
AC055855.1-201ENST00000489563 B3GAT2Q9NPZ5 323 aa3.03□□□□□ -1.92
AC055855.1-201ENST00000489563 DNAJC17Q9NVM6 304 aaKnown RBP3.03□□□□□ -1.92
AC055855.1-201ENST00000489563 CPS1P31327 1500 aa3.03□□□□□ -1.92
AC055855.1-201ENST00000489563 ATAD2BQ9ULI0 1458 aa3.03□□□□□ -1.93
AC055855.1-201ENST00000489563 NCOA1Q15788 1441 aa3.02□□□□□ -1.93
AC055855.1-201ENST00000489563 PFASO15067 1338 aa3.02□□□□□ -1.93
AC055855.1-201ENST00000489563 A0A087WZ39 114 aa3.02□□□□□ -1.93
AC055855.1-201ENST00000489563 C13orf42A0A1B0GVH6 325 aa3.02□□□□□ -1.93
AC055855.1-201ENST00000489563 RTCAO00442 366 aaKnown RBP3.02□□□□□ -1.93
AC055855.1-201ENST00000489563 SURF4O15260 269 aa3.02□□□□□ -1.93
AC055855.1-201ENST00000489563 MAGEB2O15479 319 aa3.02□□□□□ -1.93
AC055855.1-201ENST00000489563 ARHGEF9O43307 516 aa3.02□□□□□ -1.93
AC055855.1-201ENST00000489563 ATP9AO75110 1047 aa3.02□□□□□ -1.93
AC055855.1-201ENST00000489563 NME6O75414 186 aaPredicted RBP3.02□□□□□ -1.93
AC055855.1-201ENST00000489563 GRAP2O75791 330 aa3.02□□□□□ -1.93
AC055855.1-201ENST00000489563 ZFAND5O76080 213 aa3.02□□□□□ -1.93
AC055855.1-201ENST00000489563 CTNNA2P26232 953 aa3.02□□□□□ -1.93
AC055855.1-201ENST00000489563 STX1BP61266 288 aa3.02□□□□□ -1.93
AC055855.1-201ENST00000489563 ERVK11-1P61568 191 aa3.02□□□□□ -1.93
AC055855.1-201ENST00000489563 RPP38P78345 283 aaKnown RBP3.02□□□□□ -1.93
AC055855.1-201ENST00000489563 IRX1P78414 480 aaPredicted RBP3.02□□□□□ -1.93
AC055855.1-201ENST00000489563 CYCSP99999 105 aaKnown RBP3.02□□□□□ -1.93
AC055855.1-201ENST00000489563 MTHFSDQ2M296 383 aaKnown RBP3.02□□□□□ -1.93
AC055855.1-201ENST00000489563 ZNF674Q2M3X9 581 aa3.02□□□□□ -1.93
AC055855.1-201ENST00000489563 FAM106AQ4KMX7 169 aa3.02□□□□□ -1.93
AC055855.1-201ENST00000489563 ODF2Q5BJF6 829 aa3.02□□□□□ -1.93
AC055855.1-201ENST00000489563 ZNF770Q6IQ21 691 aaPredicted RBP3.02□□□□□ -1.93
AC055855.1-201ENST00000489563 Q6ZRP5 223 aa3.02□□□□□ -1.93
AC055855.1-201ENST00000489563 C15orf52Q6ZUT6 534 aaKnown RBP3.02□□□□□ -1.93
AC055855.1-201ENST00000489563 TRMT11Q7Z4G4 463 aaKnown RBP3.02□□□□□ -1.93
AC055855.1-201ENST00000489563 ZER1Q7Z7L7 766 aa3.02□□□□□ -1.93
AC055855.1-201ENST00000489563 CCDC83Q8IWF9 413 aa3.02□□□□□ -1.93
AC055855.1-201ENST00000489563 AQP12AQ8IXF9 295 aa3.02□□□□□ -1.93
AC055855.1-201ENST00000489563 CCDC185Q8N715 623 aa3.02□□□□□ -1.93
AC055855.1-201ENST00000489563 SMYD1Q8NB12 490 aa3.02□□□□□ -1.93
AC055855.1-201ENST00000489563 NUP37Q8NFH4 326 aa3.02□□□□□ -1.93
AC055855.1-201ENST00000489563 ZNF300Q96RE9 604 aaPredicted RBP3.02□□□□□ -1.93
AC055855.1-201ENST00000489563 OPRPNQ99935 248 aaPredicted RBP3.02□□□□□ -1.93
AC055855.1-201ENST00000489563 ZNF559Q9BR84 538 aa3.02□□□□□ -1.93
AC055855.1-201ENST00000489563 MTHFD2LQ9H903 347 aaPredicted RBP3.02□□□□□ -1.93
AC055855.1-201ENST00000489563 C3orf14Q9HBI5 128 aa3.02□□□□□ -1.93
AC055855.1-201ENST00000489563 ZDHHC18Q9NUE0 388 aa3.02□□□□□ -1.93
AC055855.1-201ENST00000489563 LNPEPQ9UIQ6 1025 aa3.02□□□□□ -1.93
AC055855.1-201ENST00000489563 PLCL2Q9UPR0 1127 aa3.02□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms