RNA–Protein interactions for RNA: ENST00000489417.5

SND1-214, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 2

Gene SND1, Length 1,447 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-214ENST00000489417 A0A1W2PP18 115 aa19.88■□□□□ 0.77
SND1-214ENST00000489417 ARHGAP10A1A4S6 786 aa19.88■□□□□ 0.77
SND1-214ENST00000489417 C4orf51C9J302 202 aa19.88■□□□□ 0.77
SND1-214ENST00000489417 CFLARO15519 480 aa19.88■□□□□ 0.77
SND1-214ENST00000489417 AKAP10O43572 662 aa19.88■□□□□ 0.77
SND1-214ENST00000489417 KLHL18O94889 574 aa19.88■□□□□ 0.77
SND1-214ENST00000489417 ZBTB11O95625 1053 aaPredicted RBP19.88■□□□□ 0.77
SND1-214ENST00000489417 CPOXP36551 454 aa19.88■□□□□ 0.77
SND1-214ENST00000489417 SQSTM1Q13501 440 aa19.88■□□□□ 0.77
SND1-214ENST00000489417 SF3A2Q15428 464 aaKnown RBP19.88■□□□□ 0.77
SND1-214ENST00000489417 DEFB110Q30KQ9 67 aa19.88■□□□□ 0.77
SND1-214ENST00000489417 COQ5Q5HYK3 327 aa19.88■□□□□ 0.77
SND1-214ENST00000489417 DBX2Q6ZNG2 339 aa19.88■□□□□ 0.77
SND1-214ENST00000489417 MCATQ8IVS2 390 aaKnown RBP19.88■□□□□ 0.77
SND1-214ENST00000489417 CSNK1A1LQ8N752 337 aa19.88■□□□□ 0.77
SND1-214ENST00000489417 IFI44Q8TCB0 444 aa19.88■□□□□ 0.77
SND1-214ENST00000489417 NUDT8Q8WV74 236 aa19.88■□□□□ 0.77
SND1-214ENST00000489417 STARD8Q92502 1023 aa19.88■□□□□ 0.77
SND1-214ENST00000489417 GFM2Q969S9 779 aaKnown RBP19.88■□□□□ 0.77
SND1-214ENST00000489417 VPS33AQ96AX1 596 aa19.88■□□□□ 0.77
SND1-214ENST00000489417 TESCQ96BS2 214 aa19.88■□□□□ 0.77
SND1-214ENST00000489417 KCNC2Q96PR1 638 aa19.88■□□□□ 0.77
SND1-214ENST00000489417 TEFMQ96QE5 360 aaKnown RBP19.88■□□□□ 0.77
SND1-214ENST00000489417 TBCDQ9BTW9 1192 aa19.88■□□□□ 0.77
SND1-214ENST00000489417 CHRNA10Q9GZZ6 450 aa19.88■□□□□ 0.77
SND1-214ENST00000489417 DDX31Q9H8H2 851 aaKnown RBP19.88■□□□□ 0.77
SND1-214ENST00000489417 PDE7BQ9NP56 450 aa19.88■□□□□ 0.77
SND1-214ENST00000489417 SOHLH2Q9NX45 425 aa19.88■□□□□ 0.77
SND1-214ENST00000489417 TMEM9Q9P0T7 183 aa19.88■□□□□ 0.77
SND1-214ENST00000489417 URADA6NGE7 173 aa19.87■□□□□ 0.77
SND1-214ENST00000489417 DLL1O00548 723 aa19.87■□□□□ 0.77
SND1-214ENST00000489417 FLRT2O43155 660 aa19.87■□□□□ 0.77
SND1-214ENST00000489417 EIF2S1P05198 315 aaKnown RBP19.87■□□□□ 0.77
SND1-214ENST00000489417 ITGAXP20702 1163 aa19.87■□□□□ 0.77
SND1-214ENST00000489417 DGKQP52824 942 aa19.87■□□□□ 0.77
SND1-214ENST00000489417 MAPK12P53778 367 aa19.87■□□□□ 0.77
SND1-214ENST00000489417 VSX2P58304 361 aaPredicted RBP19.87■□□□□ 0.77
SND1-214ENST00000489417 CCL7P80098 99 aa19.87■□□□□ 0.77
SND1-214ENST00000489417 SLC25A3Q00325 362 aa19.87■□□□□ 0.77
SND1-214ENST00000489417 ART3Q13508 389 aa19.87■□□□□ 0.77
SND1-214ENST00000489417 FAM174BQ3ZCQ3 159 aa19.87■□□□□ 0.77
SND1-214ENST00000489417 DNAL1Q4LDG9 190 aa19.87■□□□□ 0.77
SND1-214ENST00000489417 SPANXN4Q5MJ08 99 aa19.87■□□□□ 0.77
SND1-214ENST00000489417 MANEAQ5SRI9 462 aa19.87■□□□□ 0.77
SND1-214ENST00000489417 PRSS42Q7Z5A4 293 aa19.87■□□□□ 0.77
SND1-214ENST00000489417 RETREG3Q86VR2 466 aa19.87■□□□□ 0.77
SND1-214ENST00000489417 PUM2Q8TB72 1066 aaKnown RBP eCLIP19.87■□□□□ 0.77
SND1-214ENST00000489417 UTP15Q8TED0 518 aaKnown RBP19.87■□□□□ 0.77
SND1-214ENST00000489417 NUDT22Q9BRQ3 303 aa19.87■□□□□ 0.77
SND1-214ENST00000489417 NLNQ9BYT8 704 aa19.87■□□□□ 0.77
SND1-214ENST00000489417 PRDM7Q9NQW5 492 aa19.87■□□□□ 0.77
SND1-214ENST00000489417 SEMA5BQ9P283 1151 aa19.87■□□□□ 0.77
SND1-214ENST00000489417 LEF1Q9UJU2 399 aaPredicted RBP19.87■□□□□ 0.77
SND1-214ENST00000489417 A0A0A6YYD5 115 aa19.86■□□□□ 0.77
SND1-214ENST00000489417 ASPDHA6ND91 283 aa19.86■□□□□ 0.77
SND1-214ENST00000489417 ZSCAN9O15535 394 aaPredicted RBP19.86■□□□□ 0.77
SND1-214ENST00000489417 MAP3K7O43318 606 aa19.86■□□□□ 0.77
SND1-214ENST00000489417 HCRTR1O43613 425 aa19.86■□□□□ 0.77
SND1-214ENST00000489417 IL6P05231 212 aa19.86■□□□□ 0.77
SND1-214ENST00000489417 RPLP0P05388 317 aaKnown RBP19.86■□□□□ 0.77
SND1-214ENST00000489417 KRT16P08779 473 aa19.86■□□□□ 0.77
SND1-214ENST00000489417 ZNF888P0CJ79 500 aaPredicted RBP19.86■□□□□ 0.77
SND1-214ENST00000489417 S100A3P33764 101 aa19.86■□□□□ 0.77
SND1-214ENST00000489417 HPCAL1P37235 193 aa19.86■□□□□ 0.77
SND1-214ENST00000489417 TSFMP43897 325 aaKnown RBP19.86■□□□□ 0.77
SND1-214ENST00000489417 GSTM5P46439 218 aa19.86■□□□□ 0.77
SND1-214ENST00000489417 TAS2R50P59544 299 aa19.86■□□□□ 0.77
SND1-214ENST00000489417 RAB8AP61006 207 aa19.86■□□□□ 0.77
SND1-214ENST00000489417 TLR1Q15399 786 aa19.86■□□□□ 0.77
SND1-214ENST00000489417 FAM71E1Q6IPT2 247 aa19.86■□□□□ 0.77
SND1-214ENST00000489417 ZNF793Q6ZN11 406 aa19.86■□□□□ 0.77
SND1-214ENST00000489417 IKBIPQ70UQ0 350 aa19.86■□□□□ 0.77
SND1-214ENST00000489417 DGLUCYQ7Z3D6 616 aa19.86■□□□□ 0.77
SND1-214ENST00000489417 TMEM132CQ8N3T6 1108 aa19.86■□□□□ 0.77
SND1-214ENST00000489417 PCYOX1LQ8NBM8 494 aa19.86■□□□□ 0.77
SND1-214ENST00000489417 ZCCHC10Q8TBK6 192 aa19.86■□□□□ 0.77
SND1-214ENST00000489417 CNDP2Q96KP4 475 aaKnown RBP19.86■□□□□ 0.77
SND1-214ENST00000489417 LRRN3Q9H3W5 708 aa19.86■□□□□ 0.77
SND1-214ENST00000489417 NDE1Q9NXR1 346 aa19.86■□□□□ 0.77
SND1-214ENST00000489417 PLCL2Q9UPR0 1127 aa19.86■□□□□ 0.77
SND1-214ENST00000489417 WBP11Q9Y2W2 641 aaKnown RBP19.86■□□□□ 0.77
SND1-214ENST00000489417 ARID1BQ8NFD5 2236 aaPredicted RBP19.86■□□□□ 0.77
SND1-214ENST00000489417 SCAMP2O15127 329 aaKnown RBP19.85■□□□□ 0.77
SND1-214ENST00000489417 CASC3O15234 703 aaKnown RBP19.85■□□□□ 0.77
SND1-214ENST00000489417 SRPX2O60687 465 aaPredicted RBP19.85■□□□□ 0.77
SND1-214ENST00000489417 LDOC1O95751 146 aaPredicted RBP19.85■□□□□ 0.77
SND1-214ENST00000489417 PGRP06401 933 aa19.85■□□□□ 0.77
SND1-214ENST00000489417 COX7A2P14406 83 aa19.85■□□□□ 0.77
SND1-214ENST00000489417 HIST1H1TP22492 207 aaPredicted RBP19.85■□□□□ 0.77
SND1-214ENST00000489417 ATP5A1P25705 553 aaKnown RBP19.85■□□□□ 0.77
SND1-214ENST00000489417 GABRA4P48169 554 aa19.85■□□□□ 0.77
SND1-214ENST00000489417 ARL4DP49703 201 aa19.85■□□□□ 0.77
SND1-214ENST00000489417 TRA2BP62995 288 aaKnown RBP19.85■□□□□ 0.77
SND1-214ENST00000489417 C2orf80Q0P641 193 aa19.85■□□□□ 0.77
SND1-214ENST00000489417 UGT8Q16880 541 aa19.85■□□□□ 0.77
SND1-214ENST00000489417 DPY19L1Q2PZI1 675 aa19.85■□□□□ 0.77
SND1-214ENST00000489417 SNAP47Q5SQN1 464 aa19.85■□□□□ 0.77
SND1-214ENST00000489417 TMEM71Q6P5X7 295 aa19.85■□□□□ 0.77
SND1-214ENST00000489417 C16orf89Q6UX73 402 aa19.85■□□□□ 0.77
SND1-214ENST00000489417 PRR23CQ6ZRP0 262 aa19.85■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms