RNA–Protein interactions for RNA: ENST00000489414.5

EXOSC3-206, Transcript of exosome component 3, humanhuman

TSL 4

Gene EXOSC3, Length 535 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-206ENST00000489414 SDC4P31431 198 aa6.9□□□□□ -1.3
EXOSC3-206ENST00000489414 TRHRP34981 398 aaPredicted RBP6.9□□□□□ -1.3
EXOSC3-206ENST00000489414 KCNJ1P48048 391 aa6.9□□□□□ -1.3
EXOSC3-206ENST00000489414 ZNF143P52747 638 aaPredicted RBP6.9□□□□□ -1.3
EXOSC3-206ENST00000489414 NSUN2Q08J23 767 aaKnown RBP eCLIP6.9□□□□□ -1.3
EXOSC3-206ENST00000489414 KLF1Q13351 362 aaPredicted RBP6.9□□□□□ -1.3
EXOSC3-206ENST00000489414 XRCC4Q13426 336 aa6.9□□□□□ -1.3
EXOSC3-206ENST00000489414 TFDP2Q14188 446 aa6.9□□□□□ -1.3
EXOSC3-206ENST00000489414 KRT81Q14533 505 aa6.9□□□□□ -1.3
EXOSC3-206ENST00000489414 TRADDQ15628 312 aa6.9□□□□□ -1.3
EXOSC3-206ENST00000489414 FAM189A2Q15884 450 aa6.9□□□□□ -1.3
EXOSC3-206ENST00000489414 ACSF3Q4G176 576 aaPredicted RBP6.9□□□□□ -1.3
EXOSC3-206ENST00000489414 AGBL2Q5U5Z8 902 aa6.9□□□□□ -1.3
EXOSC3-206ENST00000489414 SPESP1Q6UW49 350 aa6.9□□□□□ -1.3
EXOSC3-206ENST00000489414 RGS9BPQ6ZS82 235 aa6.9□□□□□ -1.3
EXOSC3-206ENST00000489414 PCGF5Q86SE9 256 aa6.9□□□□□ -1.3
EXOSC3-206ENST00000489414 CCDC25Q86WR0 208 aa6.9□□□□□ -1.3
EXOSC3-206ENST00000489414 RFX6Q8HWS3 928 aa6.9□□□□□ -1.3
EXOSC3-206ENST00000489414 RAVER1Q8IY67 606 aaKnown RBP6.9□□□□□ -1.3
EXOSC3-206ENST00000489414 TMEM151AQ8N4L1 468 aa6.9□□□□□ -1.3
EXOSC3-206ENST00000489414 FBXO25Q8TCJ0 367 aa6.9□□□□□ -1.3
EXOSC3-206ENST00000489414 TRAF3IP1Q8TDR0 691 aaPredicted RBP6.9□□□□□ -1.3
EXOSC3-206ENST00000489414 PROX1Q92786 737 aa6.9□□□□□ -1.3
EXOSC3-206ENST00000489414 NT5C3BQ969T7 300 aa6.9□□□□□ -1.3
EXOSC3-206ENST00000489414 INSM2Q96T92 566 aaPredicted RBP6.9□□□□□ -1.3
EXOSC3-206ENST00000489414 CCDC77Q9BR77 488 aa6.9□□□□□ -1.3
EXOSC3-206ENST00000489414 MED18Q9BUE0 208 aa6.9□□□□□ -1.3
EXOSC3-206ENST00000489414 RSPO3Q9BXY4 272 aaPredicted RBP6.9□□□□□ -1.3
EXOSC3-206ENST00000489414 SRMSQ9H3Y6 488 aa6.9□□□□□ -1.3
EXOSC3-206ENST00000489414 ZNF304Q9HCX3 659 aa6.9□□□□□ -1.3
EXOSC3-206ENST00000489414 ENAMQ9NRM1 1142 aa6.9□□□□□ -1.3
EXOSC3-206ENST00000489414 ZDHHC18Q9NUE0 388 aa6.9□□□□□ -1.3
EXOSC3-206ENST00000489414 EURLQ9NYK6 297 aa6.9□□□□□ -1.3
EXOSC3-206ENST00000489414 GRHL1Q9NZI5 618 aa6.9□□□□□ -1.3
EXOSC3-206ENST00000489414 ZKSCAN7Q9P0L1 754 aaPredicted RBP6.9□□□□□ -1.3
EXOSC3-206ENST00000489414 SPRR3Q9UBC9 169 aa6.9□□□□□ -1.3
EXOSC3-206ENST00000489414 DRG1Q9Y295 367 aaKnown RBP6.9□□□□□ -1.3
EXOSC3-206ENST00000489414 IGHV3-20A0A0C4DH32 117 aa6.89□□□□□ -1.31
EXOSC3-206ENST00000489414 PINLYPA6NC86 204 aa6.89□□□□□ -1.31
EXOSC3-206ENST00000489414 C2orf74A8MZ97 194 aa6.89□□□□□ -1.31
EXOSC3-206ENST00000489414 G3V4G9 280 aa6.89□□□□□ -1.31
EXOSC3-206ENST00000489414 J3KR12 359 aa6.89□□□□□ -1.31
EXOSC3-206ENST00000489414 M0QZ24 198 aa6.89□□□□□ -1.31
EXOSC3-206ENST00000489414 LIASO43766 372 aa6.89□□□□□ -1.31
EXOSC3-206ENST00000489414 DLX3O60479 287 aa6.89□□□□□ -1.31
EXOSC3-206ENST00000489414 ERN1O75460 977 aaKnown RBP6.89□□□□□ -1.31
EXOSC3-206ENST00000489414 GLSO94925 669 aaPredicted RBP6.89□□□□□ -1.31
EXOSC3-206ENST00000489414 ESR1P03372 595 aa6.89□□□□□ -1.31
EXOSC3-206ENST00000489414 HEXBP07686 556 aa6.89□□□□□ -1.31
EXOSC3-206ENST00000489414 NUDT17P0C025 328 aa6.89□□□□□ -1.31
EXOSC3-206ENST00000489414 CTPS1P17812 591 aa6.89□□□□□ -1.31
EXOSC3-206ENST00000489414 KDELR1P24390 212 aa6.89□□□□□ -1.31
EXOSC3-206ENST00000489414 CDKN2BP42772 138 aa6.89□□□□□ -1.31
EXOSC3-206ENST00000489414 MAN2A2P49641 1150 aa6.89□□□□□ -1.31
EXOSC3-206ENST00000489414 SCNN1BP51168 640 aa6.89□□□□□ -1.31
EXOSC3-206ENST00000489414 NUDT6P53370 316 aa6.89□□□□□ -1.31
EXOSC3-206ENST00000489414 GYS2P54840 703 aa6.89□□□□□ -1.31
EXOSC3-206ENST00000489414 SLC6A3Q01959 620 aa6.89□□□□□ -1.31
EXOSC3-206ENST00000489414 OGDHQ02218 1023 aa6.89□□□□□ -1.31
EXOSC3-206ENST00000489414 DEUP1Q05D60 604 aa6.89□□□□□ -1.31
EXOSC3-206ENST00000489414 PDK2Q15119 407 aa6.89□□□□□ -1.31
EXOSC3-206ENST00000489414 BOLA3Q53S33 107 aa6.89□□□□□ -1.31
EXOSC3-206ENST00000489414 CASC10Q5T4H9 136 aa6.89□□□□□ -1.31
EXOSC3-206ENST00000489414 MFSD7Q6UXD7 560 aa6.89□□□□□ -1.31
EXOSC3-206ENST00000489414 FAM83HQ6ZRV2 1179 aaPredicted RBP6.89□□□□□ -1.31
EXOSC3-206ENST00000489414 FAM183BPQ6ZVS7 135 aa6.89□□□□□ -1.31
EXOSC3-206ENST00000489414 BBS12Q6ZW61 710 aa6.89□□□□□ -1.31
EXOSC3-206ENST00000489414 TRIM73Q86UV7 250 aa6.89□□□□□ -1.31
EXOSC3-206ENST00000489414 EMC1Q8N766 993 aa6.89□□□□□ -1.31
EXOSC3-206ENST00000489414 JOSD2Q8TAC2 188 aa6.89□□□□□ -1.31
EXOSC3-206ENST00000489414 ATG4AQ8WYN0 398 aa6.89□□□□□ -1.31
EXOSC3-206ENST00000489414 HSPH1Q92598 858 aa6.89□□□□□ -1.31
EXOSC3-206ENST00000489414 AKAP1Q92667 903 aaKnown RBP eCLIP6.89□□□□□ -1.31
EXOSC3-206ENST00000489414 ZBTB9Q96C00 473 aa6.89□□□□□ -1.31
EXOSC3-206ENST00000489414 FAF2Q96CS3 445 aa6.89□□□□□ -1.31
EXOSC3-206ENST00000489414 CCT8L2Q96SF2 557 aa6.89□□□□□ -1.31
EXOSC3-206ENST00000489414 TBCBQ99426 244 aa6.89□□□□□ -1.31
EXOSC3-206ENST00000489414 NRTNQ99748 197 aa6.89□□□□□ -1.31
EXOSC3-206ENST00000489414 TMEM204Q9BSN7 226 aa6.89□□□□□ -1.31
EXOSC3-206ENST00000489414 CAPS2Q9BXY5 557 aa6.89□□□□□ -1.31
EXOSC3-206ENST00000489414 TMBIM4Q9HC24 238 aa6.89□□□□□ -1.31
EXOSC3-206ENST00000489414 MMP25Q9NPA2 562 aa6.89□□□□□ -1.31
EXOSC3-206ENST00000489414 DEPPQ9NTK1 212 aa6.89□□□□□ -1.31
EXOSC3-206ENST00000489414 ACTR10Q9NZ32 417 aa6.89□□□□□ -1.31
EXOSC3-206ENST00000489414 OR12D3Q9UGF7 316 aa6.89□□□□□ -1.31
EXOSC3-206ENST00000489414 PCSK1NQ9UHG2 260 aa6.89□□□□□ -1.31
EXOSC3-206ENST00000489414 TRHDEQ9UKU6 1024 aa6.89□□□□□ -1.31
EXOSC3-206ENST00000489414 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP6.88□□□□□ -1.31
EXOSC3-206ENST00000489414 SLC5A10A0PJK1 596 aa6.88□□□□□ -1.31
EXOSC3-206ENST00000489414 C2CD4BA6NLJ0 364 aa6.88□□□□□ -1.31
EXOSC3-206ENST00000489414 APOC4-APOC2K7ER74 178 aa6.88□□□□□ -1.31
EXOSC3-206ENST00000489414 PPP1R12AO14974 1030 aaPredicted RBP6.88□□□□□ -1.31
EXOSC3-206ENST00000489414 SMAD9O15198 467 aaKnown RBP6.88□□□□□ -1.31
EXOSC3-206ENST00000489414 RGS16O15492 202 aaPredicted RBP6.88□□□□□ -1.31
EXOSC3-206ENST00000489414 CST8O60676 142 aa6.88□□□□□ -1.31
EXOSC3-206ENST00000489414 KCNJ13O60928 360 aa6.88□□□□□ -1.31
EXOSC3-206ENST00000489414 SLC25A14O95258 325 aaPredicted RBP6.88□□□□□ -1.31
EXOSC3-206ENST00000489414 MED26O95402 600 aa6.88□□□□□ -1.31
EXOSC3-206ENST00000489414 APOC2P02655 101 aa6.88□□□□□ -1.31
EXOSC3-206ENST00000489414 ZFXP17010 805 aaPredicted RBP6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms