RNA–Protein interactions for RNA: ENST00000489053.1

HDAC6-232, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-232ENST00000489053 SFT2D3Q587I9 215 aa8.61□□□□□ -1.03
HDAC6-232ENST00000489053 LGSNQ5TDP6 509 aa8.61□□□□□ -1.03
HDAC6-232ENST00000489053 B3GNTL1Q67FW5 361 aaPredicted RBP8.61□□□□□ -1.03
HDAC6-232ENST00000489053 PAPD4Q6PIY7 484 aaKnown RBP8.61□□□□□ -1.03
HDAC6-232ENST00000489053 Q6ZS92 163 aa8.61□□□□□ -1.03
HDAC6-232ENST00000489053 PDSS2Q86YH6 399 aa8.61□□□□□ -1.03
HDAC6-232ENST00000489053 TMEM151BQ8IW70 566 aa8.61□□□□□ -1.03
HDAC6-232ENST00000489053 IFT20Q8IY31 132 aa8.61□□□□□ -1.03
HDAC6-232ENST00000489053 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP8.61□□□□□ -1.03
HDAC6-232ENST00000489053 SLC5A8Q8N695 610 aa8.61□□□□□ -1.03
HDAC6-232ENST00000489053 HORMAD2Q8N7B1 307 aa8.61□□□□□ -1.03
HDAC6-232ENST00000489053 SRFBP1Q8NEF9 429 aaKnown RBP8.61□□□□□ -1.03
HDAC6-232ENST00000489053 OR5T3Q8NGG3 340 aa8.61□□□□□ -1.03
HDAC6-232ENST00000489053 PRR7Q8TB68 274 aa8.61□□□□□ -1.03
HDAC6-232ENST00000489053 UTP15Q8TED0 518 aaKnown RBP8.61□□□□□ -1.03
HDAC6-232ENST00000489053 ATP6V1E2Q96A05 226 aa8.61□□□□□ -1.03
HDAC6-232ENST00000489053 GAL3ST3Q96A11 431 aa8.61□□□□□ -1.03
HDAC6-232ENST00000489053 MOCOSQ96EN8 888 aa8.61□□□□□ -1.03
HDAC6-232ENST00000489053 SCYL1Q96KG9 808 aa8.61□□□□□ -1.03
HDAC6-232ENST00000489053 ZNF354BQ96LW1 612 aa8.61□□□□□ -1.03
HDAC6-232ENST00000489053 SARGQ9BW04 601 aa8.61□□□□□ -1.03
HDAC6-232ENST00000489053 CD244Q9BZW8 370 aa8.61□□□□□ -1.03
HDAC6-232ENST00000489053 ROGDIQ9GZN7 287 aa8.61□□□□□ -1.03
HDAC6-232ENST00000489053 STMN3Q9NZ72 180 aa8.61□□□□□ -1.03
HDAC6-232ENST00000489053 NINJ2Q9NZG7 142 aa8.61□□□□□ -1.03
HDAC6-232ENST00000489053 SNRNP200O75643 2136 aaKnown RBP8.6□□□□□ -1.03
HDAC6-232ENST00000489053 MAST4O15021 2626 aa8.6□□□□□ -1.03
HDAC6-232ENST00000489053 A0A087WUV0 522 aaPredicted RBP8.6□□□□□ -1.03
HDAC6-232ENST00000489053 LOC102723996A0A087X1L8 192 aa8.6□□□□□ -1.03
HDAC6-232ENST00000489053 IGHV3-20A0A0C4DH32 117 aa8.6□□□□□ -1.03
HDAC6-232ENST00000489053 CCDC189A1A4V9 331 aa8.6□□□□□ -1.03
HDAC6-232ENST00000489053 ANKUB1A6NFN9 424 aa8.6□□□□□ -1.03
HDAC6-232ENST00000489053 CLEC3AO75596 197 aa8.6□□□□□ -1.03
HDAC6-232ENST00000489053 SLC35E2BP0CK96 405 aa8.6□□□□□ -1.03
HDAC6-232ENST00000489053 ITGAMP11215 1152 aa8.6□□□□□ -1.03
HDAC6-232ENST00000489053 TSFMP43897 325 aaKnown RBP8.6□□□□□ -1.03
HDAC6-232ENST00000489053 PIK3CGP48736 1102 aa8.6□□□□□ -1.03
HDAC6-232ENST00000489053 RAP1GDS1P52306 607 aa8.6□□□□□ -1.03
HDAC6-232ENST00000489053 PLA2G16P53816 162 aa8.6□□□□□ -1.03
HDAC6-232ENST00000489053 SLC13A2Q13183 592 aa8.6□□□□□ -1.03
HDAC6-232ENST00000489053 CHIT1Q13231 466 aa8.6□□□□□ -1.03
HDAC6-232ENST00000489053 PCOLCEQ15113 449 aa8.6□□□□□ -1.03
HDAC6-232ENST00000489053 FBXO48Q5FWF7 155 aa8.6□□□□□ -1.03
HDAC6-232ENST00000489053 PLAG1Q6DJT9 500 aa8.6□□□□□ -1.03
HDAC6-232ENST00000489053 TMEM205Q6UW68 189 aa8.6□□□□□ -1.03
HDAC6-232ENST00000489053 SLCO4C1Q6ZQN7 724 aa8.6□□□□□ -1.03
HDAC6-232ENST00000489053 LANCL3Q6ZV70 420 aa8.6□□□□□ -1.03
HDAC6-232ENST00000489053 CHSY3Q70JA7 882 aa8.6□□□□□ -1.03
HDAC6-232ENST00000489053 ANKRD37Q7Z713 158 aa8.6□□□□□ -1.03
HDAC6-232ENST00000489053 CUZD1Q86UP6 607 aa8.6□□□□□ -1.03
HDAC6-232ENST00000489053 KLHDC8AQ8IYD2 350 aa8.6□□□□□ -1.03
HDAC6-232ENST00000489053 ARHGEF39Q8N4T4 335 aa8.6□□□□□ -1.03
HDAC6-232ENST00000489053 AFAP1L2Q8N4X5 818 aa8.6□□□□□ -1.03
HDAC6-232ENST00000489053 BCORP1Q8N888 145 aa8.6□□□□□ -1.03
HDAC6-232ENST00000489053 ANKRD53Q8N9V6 530 aa8.6□□□□□ -1.03
HDAC6-232ENST00000489053 PDPRQ8NCN5 879 aa8.6□□□□□ -1.03
HDAC6-232ENST00000489053 KCTD4Q8WVF5 259 aa8.6□□□□□ -1.03
HDAC6-232ENST00000489053 REPS1Q96D71 796 aa8.6□□□□□ -1.03
HDAC6-232ENST00000489053 SNRNP40Q96DI7 357 aaKnown RBP8.6□□□□□ -1.03
HDAC6-232ENST00000489053 C5orf34Q96MH7 638 aa8.6□□□□□ -1.03
HDAC6-232ENST00000489053 SLC6A16Q9GZN6 736 aa8.6□□□□□ -1.03
HDAC6-232ENST00000489053 REXO4Q9GZR2 422 aaKnown RBP8.6□□□□□ -1.03
HDAC6-232ENST00000489053 SPNS1Q9H2V7 528 aa8.6□□□□□ -1.03
HDAC6-232ENST00000489053 EHD1Q9H4M9 534 aa8.6□□□□□ -1.03
HDAC6-232ENST00000489053 ACSS3Q9H6R3 686 aa8.6□□□□□ -1.03
HDAC6-232ENST00000489053 ACTR8Q9H981 624 aa8.6□□□□□ -1.03
HDAC6-232ENST00000489053 ZBTB20Q9HC78 741 aaPredicted RBP8.6□□□□□ -1.03
HDAC6-232ENST00000489053 PRDM9Q9NQV7 894 aa8.6□□□□□ -1.03
HDAC6-232ENST00000489053 SNX15Q9NRS6 342 aa8.6□□□□□ -1.03
HDAC6-232ENST00000489053 ZDHHC18Q9NUE0 388 aa8.6□□□□□ -1.03
HDAC6-232ENST00000489053 ASF1BQ9NVP2 202 aa8.6□□□□□ -1.03
HDAC6-232ENST00000489053 PLA2G3Q9NZ20 509 aa8.6□□□□□ -1.03
HDAC6-232ENST00000489053 CPSF2Q9P2I0 782 aaKnown RBP8.6□□□□□ -1.03
HDAC6-232ENST00000489053 PCDHGA10Q9Y5H3 936 aa8.6□□□□□ -1.03
HDAC6-232ENST00000489053 TNPO3Q9Y5L0 923 aaKnown RBP8.6□□□□□ -1.03
HDAC6-232ENST00000489053 SPTAN1Q13813 2472 aaKnown RBP8.6□□□□□ -1.03
HDAC6-232ENST00000489053 UTP20O75691 2785 aaKnown RBP8.59□□□□□ -1.03
HDAC6-232ENST00000489053 USP9XQ93008 2570 aaPredicted RBP8.59□□□□□ -1.03
HDAC6-232ENST00000489053 A0A096LPK6 155 aa8.59□□□□□ -1.03
HDAC6-232ENST00000489053 A0A0G2JN53 185 aa8.59□□□□□ -1.03
HDAC6-232ENST00000489053 EXOC1LA0A1B0GW35 172 aa8.59□□□□□ -1.03
HDAC6-232ENST00000489053 SYNDIG1LA6NDD5 238 aa8.59□□□□□ -1.03
HDAC6-232ENST00000489053 OR5H15A6NDH6 313 aa8.59□□□□□ -1.03
HDAC6-232ENST00000489053 TCP11X1B4DZS4 312 aa8.59□□□□□ -1.03
HDAC6-232ENST00000489053 POC1B-GALNT4F8VUJ3 575 aa8.59□□□□□ -1.03
HDAC6-232ENST00000489053 K7EPI3 171 aa8.59□□□□□ -1.03
HDAC6-232ENST00000489053 UBXN8O00124 270 aa8.59□□□□□ -1.03
HDAC6-232ENST00000489053 TAPBPO15533 448 aa8.59□□□□□ -1.03
HDAC6-232ENST00000489053 SMIM24O75264 130 aa8.59□□□□□ -1.03
HDAC6-232ENST00000489053 MLYCDO95822 493 aa8.59□□□□□ -1.03
HDAC6-232ENST00000489053 F10P00742 488 aa8.59□□□□□ -1.03
HDAC6-232ENST00000489053 CRYABP02511 175 aaKnown RBP8.59□□□□□ -1.03
HDAC6-232ENST00000489053 IFNA16P05015 189 aa8.59□□□□□ -1.03
HDAC6-232ENST00000489053 C2P06681 752 aa8.59□□□□□ -1.03
HDAC6-232ENST00000489053 CELA2AP08217 269 aa8.59□□□□□ -1.03
HDAC6-232ENST00000489053 CNTFP26441 200 aa8.59□□□□□ -1.03
HDAC6-232ENST00000489053 SERPINB1P30740 379 aa8.59□□□□□ -1.03
HDAC6-232ENST00000489053 GGT5P36269 586 aa8.59□□□□□ -1.03
HDAC6-232ENST00000489053 UQCRFS1P47985 274 aa8.59□□□□□ -1.03
HDAC6-232ENST00000489053 KCNC1P48547 511 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms