RNA–Protein interactions for RNA: ENST00000488767.1

PHF1-210, Transcript of PHD finger protein 1, humanhuman

TSL 3

Gene PHF1, Length 849 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-210ENST00000488767 DNAJB5O75953 348 aa12.19□□□□□ -0.46
PHF1-210ENST00000488767 WFS1O76024 890 aa12.19□□□□□ -0.46
PHF1-210ENST00000488767 HPP00738 406 aa12.19□□□□□ -0.46
PHF1-210ENST00000488767 SHBGP04278 402 aa12.19□□□□□ -0.46
PHF1-210ENST00000488767 PRB1P04280 392 aa12.19□□□□□ -0.46
PHF1-210ENST00000488767 PYGBP11216 843 aa12.19□□□□□ -0.46
PHF1-210ENST00000488767 RNH1P13489 461 aaKnown RBP12.19□□□□□ -0.46
PHF1-210ENST00000488767 CCNG1P51959 295 aa12.19□□□□□ -0.46
PHF1-210ENST00000488767 FOXL2P58012 376 aa12.19□□□□□ -0.46
PHF1-210ENST00000488767 BTN3A2P78410 334 aa12.19□□□□□ -0.46
PHF1-210ENST00000488767 TMEM35AQ53FP2 167 aa12.19□□□□□ -0.46
PHF1-210ENST00000488767 TTC19Q6DKK2 380 aaPredicted RBP12.19□□□□□ -0.46
PHF1-210ENST00000488767 GOLGA7Q7Z5G4 137 aa12.19□□□□□ -0.46
PHF1-210ENST00000488767 PDSS2Q86YH6 399 aa12.19□□□□□ -0.46
PHF1-210ENST00000488767 SLC22A9Q8IVM8 553 aa12.19□□□□□ -0.46
PHF1-210ENST00000488767 GALNT16Q8N428 558 aa12.19□□□□□ -0.46
PHF1-210ENST00000488767 TEX19Q8NA77 164 aa12.19□□□□□ -0.46
PHF1-210ENST00000488767 ARMC2Q8NEN0 867 aa12.19□□□□□ -0.46
PHF1-210ENST00000488767 OR2L5Q8NG80 312 aa12.19□□□□□ -0.46
PHF1-210ENST00000488767 OR11G2Q8NGC1 345 aa12.19□□□□□ -0.46
PHF1-210ENST00000488767 ADAMTS18Q8TE60 1221 aa12.19□□□□□ -0.46
PHF1-210ENST00000488767 CREB3L4Q8TEY5 395 aa12.19□□□□□ -0.46
PHF1-210ENST00000488767 MZB1Q8WU39 189 aa12.19□□□□□ -0.46
PHF1-210ENST00000488767 TBC1D20Q96BZ9 403 aa12.19□□□□□ -0.46
PHF1-210ENST00000488767 CCDC126Q96EE4 140 aa12.19□□□□□ -0.46
PHF1-210ENST00000488767 CMTM7Q96FZ5 175 aa12.19□□□□□ -0.46
PHF1-210ENST00000488767 PEX11GQ96HA9 241 aa12.19□□□□□ -0.46
PHF1-210ENST00000488767 KCNC2Q96PR1 638 aa12.19□□□□□ -0.46
PHF1-210ENST00000488767 NPLQ9BXD5 320 aaPredicted RBP12.19□□□□□ -0.46
PHF1-210ENST00000488767 PARD6BQ9BYG5 372 aa12.19□□□□□ -0.46
PHF1-210ENST00000488767 TRIM55Q9BYV6 548 aa12.19□□□□□ -0.46
PHF1-210ENST00000488767 ROPN1BQ9BZX4 212 aaPredicted RBP12.19□□□□□ -0.46
PHF1-210ENST00000488767 SEMA4CQ9C0C4 833 aa12.19□□□□□ -0.46
PHF1-210ENST00000488767 IQCGQ9H095 443 aaKnown RBP12.19□□□□□ -0.46
PHF1-210ENST00000488767 ROPN1Q9HAT0 212 aaPredicted RBP12.19□□□□□ -0.46
PHF1-210ENST00000488767 RIC8BQ9NVN3 520 aa12.19□□□□□ -0.46
PHF1-210ENST00000488767 MRPS33Q9Y291 106 aaKnown RBP12.19□□□□□ -0.46
PHF1-210ENST00000488767 TP53TG5Q9Y2B4 290 aa12.19□□□□□ -0.46
PHF1-210ENST00000488767 ASB1Q9Y576 335 aa12.19□□□□□ -0.46
PHF1-210ENST00000488767 SPACA6W5XKT8 324 aa12.19□□□□□ -0.46
PHF1-210ENST00000488767 ATRXP46100 2492 aa12.18□□□□□ -0.46
PHF1-210ENST00000488767 SPTA1P02549 2419 aa12.18□□□□□ -0.46
PHF1-210ENST00000488767 TLDC2A0PJX2 215 aa12.18□□□□□ -0.46
PHF1-210ENST00000488767 LRIT2A6NDA9 550 aa12.18□□□□□ -0.46
PHF1-210ENST00000488767 B8ZZF3 427 aa12.18□□□□□ -0.46
PHF1-210ENST00000488767 E2F3O00716 465 aa12.18□□□□□ -0.46
PHF1-210ENST00000488767 SOCS6O14544 535 aa12.18□□□□□ -0.46
PHF1-210ENST00000488767 CHST10O43529 356 aa12.18□□□□□ -0.46
PHF1-210ENST00000488767 ALOX12BO75342 701 aa12.18□□□□□ -0.46
PHF1-210ENST00000488767 SIX3O95343 332 aaPredicted RBP12.18□□□□□ -0.46
PHF1-210ENST00000488767 CLDN9O95484 217 aa12.18□□□□□ -0.46
PHF1-210ENST00000488767 OTCP00480 354 aa12.18□□□□□ -0.46
PHF1-210ENST00000488767 FHP07954 510 aa12.18□□□□□ -0.46
PHF1-210ENST00000488767 ICAM2P13598 275 aa12.18□□□□□ -0.46
PHF1-210ENST00000488767 EPORP19235 508 aa12.18□□□□□ -0.46
PHF1-210ENST00000488767 RAP1GDS1P52306 607 aa12.18□□□□□ -0.46
PHF1-210ENST00000488767 PLA2G16P53816 162 aa12.18□□□□□ -0.46
PHF1-210ENST00000488767 DDX39BQ13838 428 aaKnown RBP12.18□□□□□ -0.46
PHF1-210ENST00000488767 C10orf62Q5T681 223 aaPredicted RBP12.18□□□□□ -0.46
PHF1-210ENST00000488767 VWA5B1Q5TIE3 1220 aa12.18□□□□□ -0.46
PHF1-210ENST00000488767 FAAH2Q6GMR7 532 aa12.18□□□□□ -0.46
PHF1-210ENST00000488767 KIRREL2Q6UWL6 708 aa12.18□□□□□ -0.46
PHF1-210ENST00000488767 NDUFAF7Q7L592 441 aa12.18□□□□□ -0.46
PHF1-210ENST00000488767 PRICKLE2Q7Z3G6 844 aa12.18□□□□□ -0.46
PHF1-210ENST00000488767 ZNF605Q86T29 641 aa12.18□□□□□ -0.46
PHF1-210ENST00000488767 LAPTM4BQ86VI4 370 aa12.18□□□□□ -0.46
PHF1-210ENST00000488767 KBTBD2Q8IY47 623 aa12.18□□□□□ -0.46
PHF1-210ENST00000488767 ZNF843Q8N446 348 aa12.18□□□□□ -0.46
PHF1-210ENST00000488767 CCDC63Q8NA47 563 aa12.18□□□□□ -0.46
PHF1-210ENST00000488767 EPS8L3Q8TE67 593 aaKnown RBP12.18□□□□□ -0.46
PHF1-210ENST00000488767 MS4A6EQ96DS6 147 aa12.18□□□□□ -0.46
PHF1-210ENST00000488767 TMEM109Q9BVC6 243 aa12.18□□□□□ -0.46
PHF1-210ENST00000488767 NOL11Q9H8H0 719 aaKnown RBP12.18□□□□□ -0.46
PHF1-210ENST00000488767 MID2Q9UJV3 735 aa12.18□□□□□ -0.46
PHF1-210ENST00000488767 GRID1Q9ULK0 1009 aa12.18□□□□□ -0.46
PHF1-210ENST00000488767 ZNF490Q9ULM2 529 aaPredicted RBP12.18□□□□□ -0.46
PHF1-210ENST00000488767 STK38LQ9Y2H1 464 aa12.18□□□□□ -0.46
PHF1-210ENST00000488767 SYNDIG1LA6NDD5 238 aa12.17□□□□□ -0.46
PHF1-210ENST00000488767 A8MT66 165 aa12.17□□□□□ -0.46
PHF1-210ENST00000488767 CLDN4O14493 209 aa12.17□□□□□ -0.46
PHF1-210ENST00000488767 COPEO14579 308 aa12.17□□□□□ -0.46
PHF1-210ENST00000488767 DPM1O60762 260 aa12.17□□□□□ -0.46
PHF1-210ENST00000488767 CDC123O75794 336 aaPredicted RBP12.17□□□□□ -0.46
PHF1-210ENST00000488767 CEACAM4O75871 244 aa12.17□□□□□ -0.46
PHF1-210ENST00000488767 CD22P20273 847 aa12.17□□□□□ -0.46
PHF1-210ENST00000488767 ATP5F1P24539 256 aaPredicted RBP12.17□□□□□ -0.46
PHF1-210ENST00000488767 HNRNPH1P31943 449 aaKnown RBP12.17□□□□□ -0.46
PHF1-210ENST00000488767 PIK3CBP42338 1070 aa12.17□□□□□ -0.46
PHF1-210ENST00000488767 MTTPP55157 894 aa12.17□□□□□ -0.46
PHF1-210ENST00000488767 HERVK_113P63132 956 aa12.17□□□□□ -0.46
PHF1-210ENST00000488767 KLRB1Q12918 225 aa12.17□□□□□ -0.46
PHF1-210ENST00000488767 IFT88Q13099 833 aa12.17□□□□□ -0.46
PHF1-210ENST00000488767 MYBPC3Q14896 1274 aa12.17□□□□□ -0.46
PHF1-210ENST00000488767 ABRAXAS2Q15018 415 aa12.17□□□□□ -0.46
PHF1-210ENST00000488767 NSDHLQ15738 373 aa12.17□□□□□ -0.46
PHF1-210ENST00000488767 CPSF6Q16630 551 aaKnown RBP eCLIP12.17□□□□□ -0.46
PHF1-210ENST00000488767 AP5B1Q2VPB7 878 aa12.17□□□□□ -0.46
PHF1-210ENST00000488767 CCDC153Q494R4 210 aa12.17□□□□□ -0.46
PHF1-210ENST00000488767 AGAP7PQ5VUJ5 663 aa12.17□□□□□ -0.46
PHF1-210ENST00000488767 SH2D5Q6ZV89 423 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms