RNA–Protein interactions for RNA: ENST00000488427.1

ITGB1-214, Transcript of integrin subunit beta 1, humanhuman

TSL 1 (best)

Gene ITGB1, Length 861 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-214ENST00000488427 FAM89BQ8N5H3 189 aa3.76□□□□□ -1.81
ITGB1-214ENST00000488427 SLC37A3Q8NCC5 494 aa3.76□□□□□ -1.81
ITGB1-214ENST00000488427 SLC26A7Q8TE54 656 aa3.76□□□□□ -1.81
ITGB1-214ENST00000488427 METTL21AQ8WXB1 218 aa3.76□□□□□ -1.81
ITGB1-214ENST00000488427 PROX1Q92786 737 aa3.76□□□□□ -1.81
ITGB1-214ENST00000488427 MOCOSQ96EN8 888 aa3.76□□□□□ -1.81
ITGB1-214ENST00000488427 FAM71F1Q96KD3 344 aaPredicted RBP3.76□□□□□ -1.81
ITGB1-214ENST00000488427 C4orf45Q96LM5 186 aa3.76□□□□□ -1.81
ITGB1-214ENST00000488427 MUS81Q96NY9 551 aa3.76□□□□□ -1.81
ITGB1-214ENST00000488427 CPNE1Q99829 537 aa3.76□□□□□ -1.81
ITGB1-214ENST00000488427 RBM4BQ9BQ04 359 aaKnown RBP3.76□□□□□ -1.81
ITGB1-214ENST00000488427 ATP13A3Q9H7F0 1226 aa3.76□□□□□ -1.81
ITGB1-214ENST00000488427 MED20Q9H944 212 aa3.76□□□□□ -1.81
ITGB1-214ENST00000488427 XAB2Q9HCS7 855 aaKnown RBP3.76□□□□□ -1.81
ITGB1-214ENST00000488427 CNOT1A5YKK6 2376 aaKnown RBP3.75□□□□□ -1.81
ITGB1-214ENST00000488427 COL1A1P02452 1464 aaPredicted RBP3.75□□□□□ -1.81
ITGB1-214ENST00000488427 SPTAN1Q13813 2472 aaKnown RBP3.75□□□□□ -1.81
ITGB1-214ENST00000488427 FEZF1A0PJY2 475 aa3.75□□□□□ -1.81
ITGB1-214ENST00000488427 PALM2-AKAP2B1ALY0 433 aaPredicted RBP3.75□□□□□ -1.81
ITGB1-214ENST00000488427 PSMD10O75832 226 aa3.75□□□□□ -1.81
ITGB1-214ENST00000488427 SEC24AO95486 1093 aa3.75□□□□□ -1.81
ITGB1-214ENST00000488427 ACHEP22303 614 aa3.75□□□□□ -1.81
ITGB1-214ENST00000488427 LHCGRP22888 699 aa3.75□□□□□ -1.81
ITGB1-214ENST00000488427 BDNFP23560 247 aa3.75□□□□□ -1.81
ITGB1-214ENST00000488427 MPZP25189 248 aa3.75□□□□□ -1.81
ITGB1-214ENST00000488427 MC5RP33032 325 aa3.75□□□□□ -1.81
ITGB1-214ENST00000488427 DLK1P80370 383 aa3.75□□□□□ -1.81
ITGB1-214ENST00000488427 SQLEQ14534 574 aa3.75□□□□□ -1.81
ITGB1-214ENST00000488427 EFTUD2Q15029 972 aaKnown RBP eCLIP3.75□□□□□ -1.81
ITGB1-214ENST00000488427 E2F5Q15329 346 aa3.75□□□□□ -1.81
ITGB1-214ENST00000488427 SLC1A5Q15758 541 aa3.75□□□□□ -1.81
ITGB1-214ENST00000488427 UGP2Q16851 508 aa3.75□□□□□ -1.81
ITGB1-214ENST00000488427 SPOUT1Q5T280 376 aaKnown RBP3.75□□□□□ -1.81
ITGB1-214ENST00000488427 ZNF613Q6PF04 617 aa3.75□□□□□ -1.81
ITGB1-214ENST00000488427 ENPP7Q6UWV6 458 aa3.75□□□□□ -1.81
ITGB1-214ENST00000488427 FCRLAQ7L513 359 aa3.75□□□□□ -1.81
ITGB1-214ENST00000488427 CHMP1BQ7LBR1 199 aa3.75□□□□□ -1.81
ITGB1-214ENST00000488427 ASCL5Q7RTU5 278 aa3.75□□□□□ -1.81
ITGB1-214ENST00000488427 ADCK2Q7Z695 626 aa3.75□□□□□ -1.81
ITGB1-214ENST00000488427 SLC4A11Q8NBS3 891 aa3.75□□□□□ -1.81
ITGB1-214ENST00000488427 SMAP2Q8WU79 429 aaPredicted RBP3.75□□□□□ -1.81
ITGB1-214ENST00000488427 CHURC1Q8WUH1 139 aa3.75□□□□□ -1.81
ITGB1-214ENST00000488427 KCNE4Q8WWG9 221 aa3.75□□□□□ -1.81
ITGB1-214ENST00000488427 SECISBP2LQ93073 1101 aaKnown RBP3.75□□□□□ -1.81
ITGB1-214ENST00000488427 TSACCQ96A04 125 aaPredicted RBP3.75□□□□□ -1.81
ITGB1-214ENST00000488427 SPSB1Q96BD6 273 aa3.75□□□□□ -1.81
ITGB1-214ENST00000488427 ZNF689Q96CS4 500 aaPredicted RBP3.75□□□□□ -1.81
ITGB1-214ENST00000488427 PGM2Q96G03 612 aa3.75□□□□□ -1.81
ITGB1-214ENST00000488427 C10orf90Q96M02 699 aa3.75□□□□□ -1.81
ITGB1-214ENST00000488427 SYT11Q9BT88 431 aa3.75□□□□□ -1.81
ITGB1-214ENST00000488427 EGLN1Q9GZT9 426 aa3.75□□□□□ -1.81
ITGB1-214ENST00000488427 FN3KQ9H479 309 aa3.75□□□□□ -1.81
ITGB1-214ENST00000488427 TLE6Q9H808 572 aa3.75□□□□□ -1.81
ITGB1-214ENST00000488427 TEX10Q9NXF1 929 aaPredicted RBP3.75□□□□□ -1.81
ITGB1-214ENST00000488427 RLFQ13129 1914 aa3.75□□□□□ -1.81
ITGB1-214ENST00000488427 CHD7Q9P2D1 2997 aa3.75□□□□□ -1.81
ITGB1-214ENST00000488427 PFASO15067 1338 aa3.74□□□□□ -1.81
ITGB1-214ENST00000488427 IL16Q14005 1332 aa3.74□□□□□ -1.81
ITGB1-214ENST00000488427 CENPJQ9HC77 1338 aaPredicted RBP3.74□□□□□ -1.81
ITGB1-214ENST00000488427 UBR2Q8IWV8 1755 aa3.74□□□□□ -1.81
ITGB1-214ENST00000488427 A0A087X002 238 aa3.74□□□□□ -1.81
ITGB1-214ENST00000488427 A0A1B0GU03 582 aa3.74□□□□□ -1.81
ITGB1-214ENST00000488427 IQCMA0A1B0GVH7 501 aa3.74□□□□□ -1.81
ITGB1-214ENST00000488427 YDJCA8MPS7 323 aa3.74□□□□□ -1.81
ITGB1-214ENST00000488427 TEX28O15482 410 aa3.74□□□□□ -1.81
ITGB1-214ENST00000488427 ZNF500O60304 480 aaPredicted RBP3.74□□□□□ -1.81
ITGB1-214ENST00000488427 PLOD3O60568 738 aa3.74□□□□□ -1.81
ITGB1-214ENST00000488427 MAGEC1O60732 1142 aa3.74□□□□□ -1.81
ITGB1-214ENST00000488427 EIF5BO60841 1220 aaKnown RBP3.74□□□□□ -1.81
ITGB1-214ENST00000488427 TADA2AO75478 443 aa3.74□□□□□ -1.81
ITGB1-214ENST00000488427 CSN3P07498 182 aa3.74□□□□□ -1.81
ITGB1-214ENST00000488427 ADRB2P07550 413 aa3.74□□□□□ -1.81
ITGB1-214ENST00000488427 DARSP14868 501 aaKnown RBP3.74□□□□□ -1.81
ITGB1-214ENST00000488427 EPORP19235 508 aa3.74□□□□□ -1.81
ITGB1-214ENST00000488427 CD22P20273 847 aa3.74□□□□□ -1.81
ITGB1-214ENST00000488427 MMP12P39900 470 aa3.74□□□□□ -1.81
ITGB1-214ENST00000488427 DNA2P51530 1060 aa3.74□□□□□ -1.81
ITGB1-214ENST00000488427 TRIM29Q14134 588 aa3.74□□□□□ -1.81
ITGB1-214ENST00000488427 COG2Q14746 738 aa3.74□□□□□ -1.81
ITGB1-214ENST00000488427 OPCMLQ14982 345 aa3.74□□□□□ -1.81
ITGB1-214ENST00000488427 ZNF74Q16587 644 aa3.74□□□□□ -1.81
ITGB1-214ENST00000488427 LRRC26Q2I0M4 334 aa3.74□□□□□ -1.81
ITGB1-214ENST00000488427 FASTKD1Q53R41 847 aaKnown RBP3.74□□□□□ -1.81
ITGB1-214ENST00000488427 SLC25A47Q6Q0C1 308 aa3.74□□□□□ -1.81
ITGB1-214ENST00000488427 C11orf57Q6ZUT1 292 aaPredicted RBP3.74□□□□□ -1.81
ITGB1-214ENST00000488427 AMIGO1Q86WK6 493 aa3.74□□□□□ -1.81
ITGB1-214ENST00000488427 ZNF440Q8IYI8 595 aa3.74□□□□□ -1.81
ITGB1-214ENST00000488427 LYG1Q8N1E2 194 aa3.74□□□□□ -1.81
ITGB1-214ENST00000488427 LSMEM1Q8N8F7 131 aa3.74□□□□□ -1.81
ITGB1-214ENST00000488427 GOLGA6L2Q8N9W4 650 aaPredicted RBP3.74□□□□□ -1.81
ITGB1-214ENST00000488427 OR7A2PQ8NGA2 310 aa3.74□□□□□ -1.81
ITGB1-214ENST00000488427 OR1L3Q8NH93 324 aa3.74□□□□□ -1.81
ITGB1-214ENST00000488427 GATAD1Q8WUU5 269 aa3.74□□□□□ -1.81
ITGB1-214ENST00000488427 SLCO2A1Q92959 643 aa3.74□□□□□ -1.81
ITGB1-214ENST00000488427 RAB3IPQ96QF0 476 aaPredicted RBP3.74□□□□□ -1.81
ITGB1-214ENST00000488427 SPAG5Q96R06 1193 aa3.74□□□□□ -1.81
ITGB1-214ENST00000488427 MAP3K3Q99759 626 aa3.74□□□□□ -1.81
ITGB1-214ENST00000488427 SDCBP2Q9H190 292 aa3.74□□□□□ -1.81
ITGB1-214ENST00000488427 UPF3AQ9H1J1 476 aaKnown RBP3.74□□□□□ -1.81
ITGB1-214ENST00000488427 Q9H8V8 135 aa3.74□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms