RNA–Protein interactions for RNA: ENST00000488228.1

UBE4B-210, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-210ENST00000488228 WDR20Q8TBZ3 569 aa10.48□□□□□ -0.73
UBE4B-210ENST00000488228 STARD8Q92502 1023 aa10.48□□□□□ -0.73
UBE4B-210ENST00000488228 GAL3ST3Q96A11 431 aa10.48□□□□□ -0.73
UBE4B-210ENST00000488228 REPS1Q96D71 796 aa10.48□□□□□ -0.73
UBE4B-210ENST00000488228 MS4A6EQ96DS6 147 aa10.48□□□□□ -0.73
UBE4B-210ENST00000488228 MVB12AQ96EY5 273 aa10.48□□□□□ -0.73
UBE4B-210ENST00000488228 MMABQ96EY8 250 aaPredicted RBP10.48□□□□□ -0.73
UBE4B-210ENST00000488228 ATP6V1G3Q96LB4 118 aa10.48□□□□□ -0.73
UBE4B-210ENST00000488228 F2RL3Q96RI0 385 aa10.48□□□□□ -0.73
UBE4B-210ENST00000488228 CCNL2Q96S94 520 aaPredicted RBP10.48□□□□□ -0.73
UBE4B-210ENST00000488228 C17orf62Q9BQA9 187 aa10.48□□□□□ -0.73
UBE4B-210ENST00000488228 SORBS1Q9BX66 1292 aaKnown RBP10.48□□□□□ -0.73
UBE4B-210ENST00000488228 OR51B5Q9H339 312 aa10.48□□□□□ -0.73
UBE4B-210ENST00000488228 ANKHQ9HCJ1 492 aa10.48□□□□□ -0.73
UBE4B-210ENST00000488228 ZNF304Q9HCX3 659 aa10.48□□□□□ -0.73
UBE4B-210ENST00000488228 TNFRSF12AQ9NP84 129 aa10.48□□□□□ -0.73
UBE4B-210ENST00000488228 FARSBQ9NSD9 589 aaKnown RBP10.48□□□□□ -0.73
UBE4B-210ENST00000488228 TRPC4Q9UBN4 977 aa10.48□□□□□ -0.73
UBE4B-210ENST00000488228 GPN3Q9UHW5 284 aaPredicted RBP10.48□□□□□ -0.73
UBE4B-210ENST00000488228 PCDHGA11Q9Y5H2 935 aa10.48□□□□□ -0.73
UBE4B-210ENST00000488228 SLC22A7Q9Y694 548 aa10.48□□□□□ -0.73
UBE4B-210ENST00000488228 CACNA1BQ00975 2339 aa10.47□□□□□ -0.73
UBE4B-210ENST00000488228 MAGEB17A8MXT2 336 aa10.47□□□□□ -0.73
UBE4B-210ENST00000488228 C21orf140B9A014 251 aa10.47□□□□□ -0.73
UBE4B-210ENST00000488228 RTCAO00442 366 aaKnown RBP10.47□□□□□ -0.73
UBE4B-210ENST00000488228 MANBAO00462 879 aa10.47□□□□□ -0.73
UBE4B-210ENST00000488228 EFSO43281 561 aa10.47□□□□□ -0.73
UBE4B-210ENST00000488228 GALR3O60755 368 aaPredicted RBP10.47□□□□□ -0.73
UBE4B-210ENST00000488228 ETHE1O95571 254 aa10.47□□□□□ -0.73
UBE4B-210ENST00000488228 ESRRBO95718 433 aa10.47□□□□□ -0.73
UBE4B-210ENST00000488228 TGFB1P01137 390 aa10.47□□□□□ -0.73
UBE4B-210ENST00000488228 PRKAR1AP10644 381 aa10.47□□□□□ -0.73
UBE4B-210ENST00000488228 CERS1P27544 350 aa10.47□□□□□ -0.73
UBE4B-210ENST00000488228 SERPINB1P30740 379 aa10.47□□□□□ -0.73
UBE4B-210ENST00000488228 PIK3CBP42338 1070 aa10.47□□□□□ -0.73
UBE4B-210ENST00000488228 AVPR1BP47901 424 aa10.47□□□□□ -0.73
UBE4B-210ENST00000488228 PLA2G16P53816 162 aa10.47□□□□□ -0.73
UBE4B-210ENST00000488228 PKNOX1P55347 436 aa10.47□□□□□ -0.73
UBE4B-210ENST00000488228 WDR4P57081 412 aaKnown RBP10.47□□□□□ -0.73
UBE4B-210ENST00000488228 TMPRSS3P57727 454 aa10.47□□□□□ -0.73
UBE4B-210ENST00000488228 STXBP1P61764 594 aaKnown RBP10.47□□□□□ -0.73
UBE4B-210ENST00000488228 PHEXP78562 749 aa10.47□□□□□ -0.73
UBE4B-210ENST00000488228 ASPHQ12797 758 aa10.47□□□□□ -0.73
UBE4B-210ENST00000488228 FAM53BQ14153 422 aa10.47□□□□□ -0.73
UBE4B-210ENST00000488228 HERC3Q15034 1050 aa10.47□□□□□ -0.73
UBE4B-210ENST00000488228 ADPRMQ3LIE5 342 aa10.47□□□□□ -0.73
UBE4B-210ENST00000488228 BROXQ5VW32 411 aa10.47□□□□□ -0.73
UBE4B-210ENST00000488228 KHDRBS2Q5VWX1 349 aaKnown RBP10.47□□□□□ -0.73
UBE4B-210ENST00000488228 FRG2Q64ET8 278 aa10.47□□□□□ -0.73
UBE4B-210ENST00000488228 MRPL14Q6P1L8 145 aaKnown RBP10.47□□□□□ -0.73
UBE4B-210ENST00000488228 ZC3H7AQ8IWR0 971 aaKnown RBP10.47□□□□□ -0.73
UBE4B-210ENST00000488228 GOLGA6L1Q8N7Z2 621 aa10.47□□□□□ -0.73
UBE4B-210ENST00000488228 OR2L5Q8NG80 312 aa10.47□□□□□ -0.73
UBE4B-210ENST00000488228 FKBP10Q96AY3 582 aa10.47□□□□□ -0.73
UBE4B-210ENST00000488228 MTFMTQ96DP5 389 aaKnown RBP10.47□□□□□ -0.73
UBE4B-210ENST00000488228 SEC16BQ96JE7 1060 aa10.47□□□□□ -0.73
UBE4B-210ENST00000488228 FRG2BQ96QU4 278 aa10.47□□□□□ -0.73
UBE4B-210ENST00000488228 PAIP2Q9BPZ3 127 aaKnown RBP10.47□□□□□ -0.73
UBE4B-210ENST00000488228 YIPF2Q9BWQ6 316 aa10.47□□□□□ -0.73
UBE4B-210ENST00000488228 SLC29A3Q9BZD2 475 aa10.47□□□□□ -0.73
UBE4B-210ENST00000488228 REXO4Q9GZR2 422 aaKnown RBP10.47□□□□□ -0.73
UBE4B-210ENST00000488228 ELOVL6Q9H5J4 265 aa10.47□□□□□ -0.73
UBE4B-210ENST00000488228 SOX17Q9H6I2 414 aaPredicted RBP10.47□□□□□ -0.73
UBE4B-210ENST00000488228 CDC14AQ9UNH5 594 aa10.47□□□□□ -0.73
UBE4B-210ENST00000488228 STK38LQ9Y2H1 464 aa10.47□□□□□ -0.73
UBE4B-210ENST00000488228 SSUH2Q9Y2M2 353 aa10.47□□□□□ -0.73
UBE4B-210ENST00000488228 PTRH2Q9Y3E5 179 aaKnown RBP10.47□□□□□ -0.73
UBE4B-210ENST00000488228 TIMM22Q9Y584 194 aa10.47□□□□□ -0.73
UBE4B-210ENST00000488228 MED13Q9UHV7 2174 aa10.46□□□□□ -0.73
UBE4B-210ENST00000488228 LOC400499M0QZD8 3231 aa10.46□□□□□ -0.73
UBE4B-210ENST00000488228 TMEM233B4DJY2 109 aa10.46□□□□□ -0.73
UBE4B-210ENST00000488228 DNAJB6O75190 326 aa10.46□□□□□ -0.73
UBE4B-210ENST00000488228 JRKO75564 520 aa10.46□□□□□ -0.73
UBE4B-210ENST00000488228 CRCPO75575 148 aa10.46□□□□□ -0.73
UBE4B-210ENST00000488228 LYPLA1O75608 230 aaPredicted RBP10.46□□□□□ -0.73
UBE4B-210ENST00000488228 KLF7O75840 302 aaPredicted RBP10.46□□□□□ -0.73
UBE4B-210ENST00000488228 ONECUT2O95948 504 aa10.46□□□□□ -0.73
UBE4B-210ENST00000488228 PDYNP01213 254 aa10.46□□□□□ -0.73
UBE4B-210ENST00000488228 ENO1P06733 434 aaKnown RBP10.46□□□□□ -0.73
UBE4B-210ENST00000488228 RAB40ALP0C0E4 278 aa10.46□□□□□ -0.73
UBE4B-210ENST00000488228 BGNP21810 368 aa10.46□□□□□ -0.73
UBE4B-210ENST00000488228 PTPN4P29074 926 aa10.46□□□□□ -0.73
UBE4B-210ENST00000488228 HMOX2P30519 316 aa10.46□□□□□ -0.73
UBE4B-210ENST00000488228 FOLR3P41439 243 aa10.46□□□□□ -0.73
UBE4B-210ENST00000488228 XCR1P46094 333 aa10.46□□□□□ -0.73
UBE4B-210ENST00000488228 RPS15P62841 145 aaKnown RBP10.46□□□□□ -0.73
UBE4B-210ENST00000488228 CXADRP78310 365 aa10.46□□□□□ -0.73
UBE4B-210ENST00000488228 BTN3A2P78410 334 aa10.46□□□□□ -0.73
UBE4B-210ENST00000488228 IFT88Q13099 833 aa10.46□□□□□ -0.73
UBE4B-210ENST00000488228 RCN2Q14257 317 aa10.46□□□□□ -0.73
UBE4B-210ENST00000488228 CHI3L2Q15782 390 aa10.46□□□□□ -0.73
UBE4B-210ENST00000488228 NKG7Q16617 165 aa10.46□□□□□ -0.73
UBE4B-210ENST00000488228 VWA2Q5GFL6 755 aa10.46□□□□□ -0.73
UBE4B-210ENST00000488228 HHATQ5VTY9 493 aa10.46□□□□□ -0.73
UBE4B-210ENST00000488228 CLEC6AQ6EIG7 209 aa10.46□□□□□ -0.73
UBE4B-210ENST00000488228 TRIM40Q6P9F5 258 aa10.46□□□□□ -0.73
UBE4B-210ENST00000488228 ABHD17CQ6PCB6 329 aa10.46□□□□□ -0.73
UBE4B-210ENST00000488228 C19orf48Q6RUI8 117 aa10.46□□□□□ -0.73
UBE4B-210ENST00000488228 ZNF793Q6ZN11 406 aa10.46□□□□□ -0.73
UBE4B-210ENST00000488228 CCDC81Q6ZN84 652 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms