RNA–Protein interactions for RNA: ENST00000487747.5

SMC4-219, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-219ENST00000487747 TTC30BQ8N4P2 665 aa2.86□□□□□ -1.95
SMC4-219ENST00000487747 CCDC63Q8NA47 563 aa2.86□□□□□ -1.95
SMC4-219ENST00000487747 GTSF1Q8WW33 167 aa2.86□□□□□ -1.95
SMC4-219ENST00000487747 SEPT1Q8WYJ6 367 aa2.86□□□□□ -1.95
SMC4-219ENST00000487747 SPATA33Q96N06 139 aa2.86□□□□□ -1.95
SMC4-219ENST00000487747 RUNDC3BQ96NL0 473 aa2.86□□□□□ -1.95
SMC4-219ENST00000487747 TNFRSF13CQ96RJ3 184 aa2.86□□□□□ -1.95
SMC4-219ENST00000487747 APOL6Q9BWW8 343 aa2.86□□□□□ -1.95
SMC4-219ENST00000487747 SLC12A6Q9UHW9 1150 aa2.86□□□□□ -1.95
SMC4-219ENST00000487747 TRAV9-2A0A087WT02 112 aa2.85□□□□□ -1.95
SMC4-219ENST00000487747 LMO7DNF2Z398 122 aa2.85□□□□□ -1.95
SMC4-219ENST00000487747 MLNRO43193 412 aa2.85□□□□□ -1.95
SMC4-219ENST00000487747 FCGR2BP31994 310 aaPredicted RBP2.85□□□□□ -1.95
SMC4-219ENST00000487747 FCGR2CP31995 323 aa2.85□□□□□ -1.95
SMC4-219ENST00000487747 IST1P53990 364 aa2.85□□□□□ -1.95
SMC4-219ENST00000487747 GCKRQ14397 625 aa2.85□□□□□ -1.95
SMC4-219ENST00000487747 RBBP7Q16576 425 aa2.85□□□□□ -1.95
SMC4-219ENST00000487747 IGFL3Q6UXB1 125 aa2.85□□□□□ -1.95
SMC4-219ENST00000487747 Q6ZVQ6 151 aa2.85□□□□□ -1.95
SMC4-219ENST00000487747 VASH2Q86V25 355 aa2.85□□□□□ -1.95
SMC4-219ENST00000487747 TEX26Q8N6G2 289 aa2.85□□□□□ -1.95
SMC4-219ENST00000487747 GDAP1L1Q96MZ0 367 aa2.85□□□□□ -1.95
SMC4-219ENST00000487747 LRRC3BQ96PB8 259 aa2.85□□□□□ -1.95
SMC4-219ENST00000487747 CHORDC1Q9UHD1 332 aaPredicted RBP2.85□□□□□ -1.95
SMC4-219ENST00000487747 KLF18A0A0U1RQI7 1052 aa2.84□□□□□ -1.95
SMC4-219ENST00000487747 KBTBD11O94819 623 aa2.84□□□□□ -1.95
SMC4-219ENST00000487747 C9P02748 559 aa2.84□□□□□ -1.95
SMC4-219ENST00000487747 MT-ND2P03891 347 aa2.84□□□□□ -1.95
SMC4-219ENST00000487747 HSD17B3P37058 310 aa2.84□□□□□ -1.95
SMC4-219ENST00000487747 CRYBA2P53672 197 aa2.84□□□□□ -1.95
SMC4-219ENST00000487747 MTCP1P56278 107 aa2.84□□□□□ -1.95
SMC4-219ENST00000487747 ALCAMQ13740 583 aa2.84□□□□□ -1.95
SMC4-219ENST00000487747 MUC21Q5SSG8 566 aa2.84□□□□□ -1.95
SMC4-219ENST00000487747 Q71RC1 249 aaPredicted RBP2.84□□□□□ -1.95
SMC4-219ENST00000487747 OR1B1Q8NGR6 318 aa2.84□□□□□ -1.95
SMC4-219ENST00000487747 SPSB1Q96BD6 273 aa2.84□□□□□ -1.95
SMC4-219ENST00000487747 KCNK13Q9HB14 408 aa2.84□□□□□ -1.95
SMC4-219ENST00000487747 XAB2Q9HCS7 855 aaKnown RBP2.84□□□□□ -1.95
SMC4-219ENST00000487747 THYN1Q9P016 225 aa2.84□□□□□ -1.95
SMC4-219ENST00000487747 RPS6KA6Q9UK32 745 aa2.84□□□□□ -1.95
SMC4-219ENST00000487747 SNX8Q9Y5X2 465 aa2.84□□□□□ -1.95
SMC4-219ENST00000487747 TEX48A0A1B0GUV7 120 aa2.83□□□□□ -1.96
SMC4-219ENST00000487747 LOC390937A0A1W2PQ73 354 aa2.83□□□□□ -1.96
SMC4-219ENST00000487747 E7ENQ6 273 aa2.83□□□□□ -1.96
SMC4-219ENST00000487747 TTC31Q49AM3 519 aaPredicted RBP2.83□□□□□ -1.96
SMC4-219ENST00000487747 LRRC37A5PQ49AS3 106 aa2.83□□□□□ -1.96
SMC4-219ENST00000487747 HERC4Q5GLZ8 1057 aaPredicted RBP2.83□□□□□ -1.96
SMC4-219ENST00000487747 TRMT11Q7Z4G4 463 aaKnown RBP2.83□□□□□ -1.96
SMC4-219ENST00000487747 APCDD1Q8J025 514 aa2.83□□□□□ -1.96
SMC4-219ENST00000487747 BANPQ8N9N5 519 aa2.83□□□□□ -1.96
SMC4-219ENST00000487747 PNNQ9H307 717 aaKnown RBP2.83□□□□□ -1.96
SMC4-219ENST00000487747 MRPL11Q9Y3B7 192 aaKnown RBP2.83□□□□□ -1.96
SMC4-219ENST00000487747 FAM169AQ9Y6X4 670 aa2.83□□□□□ -1.96
SMC4-219ENST00000487747 ANKRD18BA2A2Z9 1011 aa2.82□□□□□ -1.96
SMC4-219ENST00000487747 IGLON5A6NGN9 336 aa2.82□□□□□ -1.96
SMC4-219ENST00000487747 AHCYL1O43865 530 aa2.82□□□□□ -1.96
SMC4-219ENST00000487747 PRAF2O60831 178 aa2.82□□□□□ -1.96
SMC4-219ENST00000487747 PIGRP01833 764 aa2.82□□□□□ -1.96
SMC4-219ENST00000487747 ACHEP22303 614 aa2.82□□□□□ -1.96
SMC4-219ENST00000487747 PAX3P23760 479 aa2.82□□□□□ -1.96
SMC4-219ENST00000487747 CSE1LP55060 971 aaKnown RBP2.82□□□□□ -1.96
SMC4-219ENST00000487747 EVCP57679 992 aa2.82□□□□□ -1.96
SMC4-219ENST00000487747 NAAAQ02083 359 aa2.82□□□□□ -1.96
SMC4-219ENST00000487747 SIM2Q14190 667 aaPredicted RBP2.82□□□□□ -1.96
SMC4-219ENST00000487747 KRT39Q6A163 491 aa2.82□□□□□ -1.96
SMC4-219ENST00000487747 CGB2Q6NT52 195 aa2.82□□□□□ -1.96
SMC4-219ENST00000487747 RFWD3Q6PCD5 774 aa2.82□□□□□ -1.96
SMC4-219ENST00000487747 PLPPR4Q7Z2D5 763 aa2.82□□□□□ -1.96
SMC4-219ENST00000487747 PRUNE1Q86TP1 453 aa2.82□□□□□ -1.96
SMC4-219ENST00000487747 ZNRF1Q8ND25 227 aa2.82□□□□□ -1.96
SMC4-219ENST00000487747 ALKBH3Q96Q83 286 aaPredicted RBP2.82□□□□□ -1.96
SMC4-219ENST00000487747 DEFB126Q9BYW3 111 aa2.82□□□□□ -1.96
SMC4-219ENST00000487747 SNX25Q9H3E2 840 aa2.82□□□□□ -1.96
SMC4-219ENST00000487747 LIME1Q9H400 295 aa2.82□□□□□ -1.96
SMC4-219ENST00000487747 PLEKHA3Q9HB20 300 aa2.82□□□□□ -1.96
SMC4-219ENST00000487747 PLSCR3Q9NRY6 295 aa2.82□□□□□ -1.96
SMC4-219ENST00000487747 IARS2Q9NSE4 1012 aaKnown RBP2.82□□□□□ -1.96
SMC4-219ENST00000487747 SATB2Q9UPW6 733 aa2.82□□□□□ -1.96
SMC4-219ENST00000487747 E5RGE8 158 aa2.81□□□□□ -1.96
SMC4-219ENST00000487747 ANHXE9PGG2 379 aa2.81□□□□□ -1.96
SMC4-219ENST00000487747 TSC22D2O75157 780 aa2.81□□□□□ -1.96
SMC4-219ENST00000487747 GFPT2O94808 682 aa2.81□□□□□ -1.96
SMC4-219ENST00000487747 ZNF32P17041 273 aa2.81□□□□□ -1.96
SMC4-219ENST00000487747 EEF1B2P24534 225 aaKnown RBP2.81□□□□□ -1.96
SMC4-219ENST00000487747 NNMTP40261 264 aa2.81□□□□□ -1.96
SMC4-219ENST00000487747 PCK2Q16822 640 aa2.81□□□□□ -1.96
SMC4-219ENST00000487747 ZNF542PQ5EBM4 170 aa2.81□□□□□ -1.96
SMC4-219ENST00000487747 WSCD1Q658N2 575 aa2.81□□□□□ -1.96
SMC4-219ENST00000487747 FUT10Q6P4F1 479 aa2.81□□□□□ -1.96
SMC4-219ENST00000487747 MOXD1Q6UVY6 613 aa2.81□□□□□ -1.96
SMC4-219ENST00000487747 IGFL2Q6UWQ7 119 aa2.81□□□□□ -1.96
SMC4-219ENST00000487747 COX8CQ7Z4L0 72 aa2.81□□□□□ -1.96
SMC4-219ENST00000487747 CD99L2Q8TCZ2 262 aa2.81□□□□□ -1.96
SMC4-219ENST00000487747 P2RX5Q93086 422 aa2.81□□□□□ -1.96
SMC4-219ENST00000487747 PPP1R16AQ96I34 528 aa2.81□□□□□ -1.96
SMC4-219ENST00000487747 RCHY1Q96PM5 261 aa2.81□□□□□ -1.96
SMC4-219ENST00000487747 RSPH14Q9UHP6 348 aa2.81□□□□□ -1.96
SMC4-219ENST00000487747 NIP7Q9Y221 180 aaKnown RBP eCLIP2.81□□□□□ -1.961e-7■■■■■ 83.2
SMC4-219ENST00000487747 NSG2Q9Y328 171 aa2.81□□□□□ -1.96
SMC4-219ENST00000487747 CPQQ9Y646 472 aa2.81□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms