RNA–Protein interactions for RNA: ENST00000487496.1

SPEN-205, Transcript of spen family transcriptional repressor, humanhuman

TSL 1 (best)

Gene SPEN, Length 543 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPEN-205ENST00000487496 WDR34Q96EX3 536 aa10.78□□□□□ -0.68
SPEN-205ENST00000487496 ATOH8Q96SQ7 321 aa10.78□□□□□ -0.68
SPEN-205ENST00000487496 CD244Q9BZW8 370 aa10.78□□□□□ -0.68
SPEN-205ENST00000487496 PITHD1Q9GZP4 211 aaPredicted RBP10.78□□□□□ -0.68
SPEN-205ENST00000487496 EHD1Q9H4M9 534 aa10.78□□□□□ -0.68
SPEN-205ENST00000487496 NMRAL1Q9HBL8 299 aa10.78□□□□□ -0.68
SPEN-205ENST00000487496 MTRF1LQ9UGC7 380 aaKnown RBP10.78□□□□□ -0.68
SPEN-205ENST00000487496 ZNF490Q9ULM2 529 aaPredicted RBP10.78□□□□□ -0.68
SPEN-205ENST00000487496 ACOT9Q9Y305 439 aa10.78□□□□□ -0.68
SPEN-205ENST00000487496 ASB1Q9Y576 335 aa10.78□□□□□ -0.68
SPEN-205ENST00000487496 SETXQ7Z333 2677 aaKnown RBP10.78□□□□□ -0.68
SPEN-205ENST00000487496 DYTNA2CJ06 578 aa10.77□□□□□ -0.69
SPEN-205ENST00000487496 LRIT2A6NDA9 550 aa10.77□□□□□ -0.69
SPEN-205ENST00000487496 A8MUI8 341 aa10.77□□□□□ -0.69
SPEN-205ENST00000487496 CLGNO14967 610 aa10.77□□□□□ -0.69
SPEN-205ENST00000487496 B4GALT2O60909 372 aa10.77□□□□□ -0.69
SPEN-205ENST00000487496 KERAO60938 352 aa10.77□□□□□ -0.69
SPEN-205ENST00000487496 CLEC3AO75596 197 aa10.77□□□□□ -0.69
SPEN-205ENST00000487496 TBX6O95947 436 aaPredicted RBP10.77□□□□□ -0.69
SPEN-205ENST00000487496 S100BP04271 92 aaPredicted RBP10.77□□□□□ -0.69
SPEN-205ENST00000487496 TUBB4AP04350 444 aa10.77□□□□□ -0.69
SPEN-205ENST00000487496 C2P06681 752 aa10.77□□□□□ -0.69
SPEN-205ENST00000487496 UQCRHP07919 91 aa10.77□□□□□ -0.69
SPEN-205ENST00000487496 LTA4HP09960 611 aaKnown RBP10.77□□□□□ -0.69
SPEN-205ENST00000487496 CTAGE8P0CG41 777 aa10.77□□□□□ -0.69
SPEN-205ENST00000487496 EPORP19235 508 aa10.77□□□□□ -0.69
SPEN-205ENST00000487496 GSTM2P28161 218 aa10.77□□□□□ -0.69
SPEN-205ENST00000487496 TNFSF10P50591 281 aa10.77□□□□□ -0.69
SPEN-205ENST00000487496 STXBP1P61764 594 aaKnown RBP10.77□□□□□ -0.69
SPEN-205ENST00000487496 BTN3A2P78410 334 aa10.77□□□□□ -0.69
SPEN-205ENST00000487496 IRF9Q00978 393 aa10.77□□□□□ -0.69
SPEN-205ENST00000487496 BMPR2Q13873 1038 aa10.77□□□□□ -0.69
SPEN-205ENST00000487496 DOC2AQ14183 400 aa10.77□□□□□ -0.69
SPEN-205ENST00000487496 NR6A1Q15406 480 aa10.77□□□□□ -0.69
SPEN-205ENST00000487496 PDK4Q16654 411 aa10.77□□□□□ -0.69
SPEN-205ENST00000487496 EIF2S3LQ2VIR3 472 aaKnown RBP10.77□□□□□ -0.69
SPEN-205ENST00000487496 XKR6Q5GH73 641 aa10.77□□□□□ -0.69
SPEN-205ENST00000487496 FHL5Q5TD97 284 aa10.77□□□□□ -0.69
SPEN-205ENST00000487496 MROH9Q5TGP6 573 aa10.77□□□□□ -0.69
SPEN-205ENST00000487496 ADNP2Q6IQ32 1131 aa10.77□□□□□ -0.69
SPEN-205ENST00000487496 VN1R5Q7Z5H4 357 aa10.77□□□□□ -0.69
SPEN-205ENST00000487496 CCDC91Q7Z6B0 441 aa10.77□□□□□ -0.69
SPEN-205ENST00000487496 CTAGE4Q8IX94 777 aa10.77□□□□□ -0.69
SPEN-205ENST00000487496 CENPLQ8N0S6 344 aaPredicted RBP10.77□□□□□ -0.69
SPEN-205ENST00000487496 CA13Q8N1Q1 262 aa10.77□□□□□ -0.69
SPEN-205ENST00000487496 OR1N1Q8NGS0 311 aa10.77□□□□□ -0.69
SPEN-205ENST00000487496 KCTD4Q8WVF5 259 aa10.77□□□□□ -0.69
SPEN-205ENST00000487496 IFT81Q8WYA0 676 aa10.77□□□□□ -0.69
SPEN-205ENST00000487496 CCT6BQ92526 530 aa10.77□□□□□ -0.69
SPEN-205ENST00000487496 NXNL1Q96CM4 212 aa10.77□□□□□ -0.69
SPEN-205ENST00000487496 MS4A6EQ96DS6 147 aa10.77□□□□□ -0.69
SPEN-205ENST00000487496 PTCD3Q96EY7 689 aaKnown RBP10.77□□□□□ -0.69
SPEN-205ENST00000487496 SEC16BQ96JE7 1060 aa10.77□□□□□ -0.69
SPEN-205ENST00000487496 LPAR4Q99677 370 aa10.77□□□□□ -0.69
SPEN-205ENST00000487496 FUT8Q9BYC5 575 aa10.77□□□□□ -0.69
SPEN-205ENST00000487496 TSPYL1Q9H0U9 437 aa10.77□□□□□ -0.69
SPEN-205ENST00000487496 CDC42EP4Q9H3Q1 356 aaKnown RBP10.77□□□□□ -0.69
SPEN-205ENST00000487496 ACSS3Q9H6R3 686 aa10.77□□□□□ -0.69
SPEN-205ENST00000487496 AGPAT4Q9NRZ5 378 aa10.77□□□□□ -0.69
SPEN-205ENST00000487496 STMN3Q9NZ72 180 aa10.77□□□□□ -0.69
SPEN-205ENST00000487496 NUDT4Q9NZJ9 180 aa10.77□□□□□ -0.69
SPEN-205ENST00000487496 HECTD1Q9ULT8 2610 aa10.77□□□□□ -0.69
SPEN-205ENST00000487496 DOPEY2Q9Y3R5 2298 aa10.77□□□□□ -0.69
SPEN-205ENST00000487496 LRRK2Q5S007 2527 aa10.76□□□□□ -0.69
SPEN-205ENST00000487496 A0A087X1B8 175 aa10.76□□□□□ -0.69
SPEN-205ENST00000487496 A0A096LPK6 155 aa10.76□□□□□ -0.69
SPEN-205ENST00000487496 A0A0G2JN53 185 aa10.76□□□□□ -0.69
SPEN-205ENST00000487496 ANKDD1BA6NHY2 528 aa10.76□□□□□ -0.69
SPEN-205ENST00000487496 SUPT3HB4E1H0 165 aa10.76□□□□□ -0.69
SPEN-205ENST00000487496 FAM227AF5H4B4 570 aa10.76□□□□□ -0.69
SPEN-205ENST00000487496 UBXN8O00124 270 aa10.76□□□□□ -0.69
SPEN-205ENST00000487496 KIF2AO00139 706 aaPredicted RBP10.76□□□□□ -0.69
SPEN-205ENST00000487496 PSMD12O00232 456 aaPredicted RBP10.76□□□□□ -0.69
SPEN-205ENST00000487496 ERI3O43414 337 aaKnown RBP10.76□□□□□ -0.69
SPEN-205ENST00000487496 CCNT2O60583 730 aaKnown RBP10.76□□□□□ -0.69
SPEN-205ENST00000487496 PRMT3O60678 531 aa10.76□□□□□ -0.69
SPEN-205ENST00000487496 SUPT3HO75486 399 aa10.76□□□□□ -0.69
SPEN-205ENST00000487496 WDPCPO95876 746 aa10.76□□□□□ -0.69
SPEN-205ENST00000487496 F10P00742 488 aa10.76□□□□□ -0.69
SPEN-205ENST00000487496 RNH1P13489 461 aaKnown RBP10.76□□□□□ -0.69
SPEN-205ENST00000487496 MTHFD2P13995 350 aa10.76□□□□□ -0.69
SPEN-205ENST00000487496 CD22P20273 847 aa10.76□□□□□ -0.69
SPEN-205ENST00000487496 ECHS1P30084 290 aa10.76□□□□□ -0.69
SPEN-205ENST00000487496 HNRNPH1P31943 449 aaKnown RBP10.76□□□□□ -0.69
SPEN-205ENST00000487496 OR4D2P58180 307 aa10.76□□□□□ -0.69
SPEN-205ENST00000487496 BTG2P78543 158 aa10.76□□□□□ -0.69
SPEN-205ENST00000487496 ZNF33BQ06732 778 aa10.76□□□□□ -0.69
SPEN-205ENST00000487496 ACTN3Q08043 901 aaPredicted RBP10.76□□□□□ -0.69
SPEN-205ENST00000487496 CHIT1Q13231 466 aa10.76□□□□□ -0.69
SPEN-205ENST00000487496 RUNX2Q13950 521 aa10.76□□□□□ -0.69
SPEN-205ENST00000487496 TBCCQ15814 346 aa10.76□□□□□ -0.69
SPEN-205ENST00000487496 UAP1Q16222 522 aaPredicted RBP10.76□□□□□ -0.69
SPEN-205ENST00000487496 EXT1Q16394 746 aa10.76□□□□□ -0.69
SPEN-205ENST00000487496 GLE1Q53GS7 698 aaKnown RBP10.76□□□□□ -0.69
SPEN-205ENST00000487496 ABHD17BQ5VST6 288 aa10.76□□□□□ -0.69
SPEN-205ENST00000487496 RPUSD3Q6P087 351 aaKnown RBP10.76□□□□□ -0.69
SPEN-205ENST00000487496 PAPD4Q6PIY7 484 aaKnown RBP10.76□□□□□ -0.69
SPEN-205ENST00000487496 QSOX2Q6ZRP7 698 aa10.76□□□□□ -0.69
SPEN-205ENST00000487496 LRRC70Q7Z2Q7 622 aa10.76□□□□□ -0.69
SPEN-205ENST00000487496 OR2L5Q8NG80 312 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms