RNA–Protein interactions for RNA: ENST00000487461.1

VPS16-208, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS16, Length 634 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-208ENST00000487461 TPP2P29144 1249 aaPredicted RBP11.43□□□□□ -0.58
VPS16-208ENST00000487461 ITGA8P53708 1063 aa11.43□□□□□ -0.58
VPS16-208ENST00000487461 MLF1P58340 268 aa11.43□□□□□ -0.58
VPS16-208ENST00000487461 TAS2R39P59534 338 aa11.43□□□□□ -0.58
VPS16-208ENST00000487461 TAS2R50P59544 299 aa11.43□□□□□ -0.58
VPS16-208ENST00000487461 SKP1P63208 163 aa11.43□□□□□ -0.58
VPS16-208ENST00000487461 ADORA2A-AS1P86434 159 aa11.43□□□□□ -0.58
VPS16-208ENST00000487461 MGAT5Q09328 741 aa11.43□□□□□ -0.58
VPS16-208ENST00000487461 ZNF460Q14592 562 aa11.43□□□□□ -0.58
VPS16-208ENST00000487461 MAPKAPK3Q16644 382 aa11.43□□□□□ -0.58
VPS16-208ENST00000487461 ZNF630Q2M218 657 aaPredicted RBP11.43□□□□□ -0.58
VPS16-208ENST00000487461 C18orf21Q32NC0 220 aaPredicted RBP11.43□□□□□ -0.58
VPS16-208ENST00000487461 RNFT1Q5M7Z0 435 aa11.43□□□□□ -0.58
VPS16-208ENST00000487461 MTFR2Q6P444 385 aa11.43□□□□□ -0.58
VPS16-208ENST00000487461 RPTNQ6XPR3 784 aa11.43□□□□□ -0.58
VPS16-208ENST00000487461 BNC2Q6ZN30 1099 aaPredicted RBP11.43□□□□□ -0.58
VPS16-208ENST00000487461 QSOX2Q6ZRP7 698 aa11.43□□□□□ -0.58
VPS16-208ENST00000487461 SYDE1Q6ZW31 735 aaPredicted RBP11.43□□□□□ -0.58
VPS16-208ENST00000487461 TMPRSS11BQ86T26 416 aa11.43□□□□□ -0.58
VPS16-208ENST00000487461 ZC3HC1Q86WB0 502 aaKnown RBP11.43□□□□□ -0.58
VPS16-208ENST00000487461 ZNF227Q86WZ6 799 aa11.43□□□□□ -0.58
VPS16-208ENST00000487461 CREG2Q8IUH2 290 aa11.43□□□□□ -0.58
VPS16-208ENST00000487461 SPPL2CQ8IUH8 684 aa11.43□□□□□ -0.58
VPS16-208ENST00000487461 SIAH3Q8IW03 269 aa11.43□□□□□ -0.58
VPS16-208ENST00000487461 NKAPQ8N5F7 415 aaKnown RBP11.43□□□□□ -0.58
VPS16-208ENST00000487461 TMEM178AQ8NBL3 297 aa11.43□□□□□ -0.58
VPS16-208ENST00000487461 TRPV3Q8NET8 790 aa11.43□□□□□ -0.58
VPS16-208ENST00000487461 ANKRD7Q92527 254 aa11.43□□□□□ -0.58
VPS16-208ENST00000487461 LRRC39Q96DD0 335 aa11.43□□□□□ -0.58
VPS16-208ENST00000487461 CAPZA3Q96KX2 299 aa11.43□□□□□ -0.58
VPS16-208ENST00000487461 FRMD6Q96NE9 622 aa11.43□□□□□ -0.58
VPS16-208ENST00000487461 AIF1LQ9BQI0 150 aa11.43□□□□□ -0.58
VPS16-208ENST00000487461 RHBGQ9H310 441 aa11.43□□□□□ -0.58
VPS16-208ENST00000487461 KCNF1Q9H3M0 494 aa11.43□□□□□ -0.58
VPS16-208ENST00000487461 CLK4Q9HAZ1 481 aaKnown RBP11.43□□□□□ -0.58
VPS16-208ENST00000487461 NECTIN3Q9NQS3 549 aa11.43□□□□□ -0.58
VPS16-208ENST00000487461 MOCS1Q9NZB8 636 aa11.43□□□□□ -0.58
VPS16-208ENST00000487461 ZFATQ9P243 1243 aa11.43□□□□□ -0.58
VPS16-208ENST00000487461 LRFN1Q9P244 771 aa11.43□□□□□ -0.58
VPS16-208ENST00000487461 KCNE2Q9Y6J6 123 aa11.43□□□□□ -0.58
VPS16-208ENST00000487461 ABCA12Q86UK0 2595 aa11.43□□□□□ -0.58
VPS16-208ENST00000487461 IGKV3D-11A0A0A0MRZ8 115 aa11.42□□□□□ -0.58
VPS16-208ENST00000487461 FAM95CA0A1B0GW59 222 aa11.42□□□□□ -0.58
VPS16-208ENST00000487461 TCRBV16S1A1N1A0A5B0 115 aa11.42□□□□□ -0.58
VPS16-208ENST00000487461 URADA6NGE7 173 aa11.42□□□□□ -0.58
VPS16-208ENST00000487461 ASNA1O43681 348 aa11.42□□□□□ -0.58
VPS16-208ENST00000487461 SERPINA6P08185 405 aa11.42□□□□□ -0.58
VPS16-208ENST00000487461 RNH1P13489 461 aaKnown RBP11.42□□□□□ -0.58
VPS16-208ENST00000487461 GDF5P43026 501 aa11.42□□□□□ -0.58
VPS16-208ENST00000487461 CASP6P55212 293 aa11.42□□□□□ -0.58
VPS16-208ENST00000487461 ARL4CP56559 192 aa11.42□□□□□ -0.58
VPS16-208ENST00000487461 DR1Q01658 176 aa11.42□□□□□ -0.58
VPS16-208ENST00000487461 FASTKD3Q14CZ7 662 aaKnown RBP11.42□□□□□ -0.58
VPS16-208ENST00000487461 TOR1AIP1Q5JTV8 583 aa11.42□□□□□ -0.58
VPS16-208ENST00000487461 XKRXQ6PP77 449 aa11.42□□□□□ -0.58
VPS16-208ENST00000487461 Q6ZPB1 254 aaPredicted RBP11.42□□□□□ -0.58
VPS16-208ENST00000487461 CA13Q8N1Q1 262 aa11.42□□□□□ -0.58
VPS16-208ENST00000487461 HORMAD2Q8N7B1 307 aa11.42□□□□□ -0.58
VPS16-208ENST00000487461 ANKRD49Q8WVL7 239 aa11.42□□□□□ -0.58
VPS16-208ENST00000487461 TRIM51Q9BSJ1 452 aa11.42□□□□□ -0.58
VPS16-208ENST00000487461 TRIM45Q9H8W5 580 aaPredicted RBP11.42□□□□□ -0.58
VPS16-208ENST00000487461 PRDM9Q9NQV7 894 aa11.42□□□□□ -0.58
VPS16-208ENST00000487461 CSMD1Q96PZ7 3565 aa11.42□□□□□ -0.58
VPS16-208ENST00000487461 PKDREJQ9NTG1 2253 aa11.41□□□□□ -0.58
VPS16-208ENST00000487461 SAGE2PA6NJ88 616 aa11.41□□□□□ -0.58
VPS16-208ENST00000487461 USP27XA6NNY8 438 aa11.41□□□□□ -0.58
VPS16-208ENST00000487461 PSMD12O00232 456 aaPredicted RBP11.41□□□□□ -0.58
VPS16-208ENST00000487461 CDK2AP1O14519 115 aa11.41□□□□□ -0.58
VPS16-208ENST00000487461 NME2P1O60361 137 aa11.41□□□□□ -0.58
VPS16-208ENST00000487461 SLC25A12O75746 678 aa11.41□□□□□ -0.58
VPS16-208ENST00000487461 SEC31AO94979 1220 aaKnown RBP11.41□□□□□ -0.58
VPS16-208ENST00000487461 MLYCDO95822 493 aa11.41□□□□□ -0.58
VPS16-208ENST00000487461 SNRPB2P08579 225 aaKnown RBP11.41□□□□□ -0.58
VPS16-208ENST00000487461 C1GALT1C1LP0DN25 315 aa11.41□□□□□ -0.58
VPS16-208ENST00000487461 ESRRAP11474 423 aaPredicted RBP11.41□□□□□ -0.58
VPS16-208ENST00000487461 NME2P22392 152 aa11.41□□□□□ -0.58
VPS16-208ENST00000487461 TRHRP34981 398 aaPredicted RBP11.41□□□□□ -0.58
VPS16-208ENST00000487461 CYB561P49447 251 aa11.41□□□□□ -0.58
VPS16-208ENST00000487461 HLCSP50747 726 aa11.41□□□□□ -0.58
VPS16-208ENST00000487461 BTN3A2P78410 334 aa11.41□□□□□ -0.58
VPS16-208ENST00000487461 CDKL1Q00532 357 aa11.41□□□□□ -0.58
VPS16-208ENST00000487461 HSF1Q00613 529 aa11.41□□□□□ -0.58
VPS16-208ENST00000487461 PDIA2Q13087 525 aaKnown RBP11.41□□□□□ -0.58
VPS16-208ENST00000487461 RUNX2Q13950 521 aa11.41□□□□□ -0.58
VPS16-208ENST00000487461 CDSNQ15517 529 aa11.41□□□□□ -0.58
VPS16-208ENST00000487461 TSNQ15631 228 aaKnown RBP11.41□□□□□ -0.58
VPS16-208ENST00000487461 SLCO4C1Q6ZQN7 724 aa11.41□□□□□ -0.58
VPS16-208ENST00000487461 CEP97Q8IW35 865 aa11.41□□□□□ -0.58
VPS16-208ENST00000487461 CHERPQ8IWX8 916 aaKnown RBP11.41□□□□□ -0.58
VPS16-208ENST00000487461 CPSF7Q8N684 471 aaKnown RBP11.41□□□□□ -0.58
VPS16-208ENST00000487461 FBXO36Q8NEA4 188 aa11.41□□□□□ -0.58
VPS16-208ENST00000487461 RHBDF1Q96CC6 855 aa11.41□□□□□ -0.58
VPS16-208ENST00000487461 MAGED4Q96JG8 741 aa11.41□□□□□ -0.58
VPS16-208ENST00000487461 EGFL8Q99944 293 aa11.41□□□□□ -0.58
VPS16-208ENST00000487461 MCMBPQ9BTE3 642 aa11.41□□□□□ -0.58
VPS16-208ENST00000487461 DEFB126Q9BYW3 111 aa11.41□□□□□ -0.58
VPS16-208ENST00000487461 TRIM31Q9BZY9 425 aa11.41□□□□□ -0.58
VPS16-208ENST00000487461 RUBCNLQ9H714 662 aa11.41□□□□□ -0.58
VPS16-208ENST00000487461 CHST11Q9NPF2 352 aa11.41□□□□□ -0.58
VPS16-208ENST00000487461 CTNNAL1Q9UBT7 734 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms