RNA–Protein interactions for RNA: ENST00000487215.1

SMPDL3A-202, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

TSL 2

Gene SMPDL3A, Length 903 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-202ENST00000487215 SDR42E2A6NKP2 422 aa18.16■□□□□ 0.5
SMPDL3A-202ENST00000487215 MLNP12872 115 aa18.16■□□□□ 0.5
SMPDL3A-202ENST00000487215 MSX1P28360 303 aa18.16■□□□□ 0.5
SMPDL3A-202ENST00000487215 GPR85P60893 370 aa18.16■□□□□ 0.5
SMPDL3A-202ENST00000487215 TIAL1Q01085 375 aaKnown RBP eCLIP18.16■□□□□ 0.5
SMPDL3A-202ENST00000487215 DHX9Q08211 1270 aaKnown RBP18.16■□□□□ 0.5
SMPDL3A-202ENST00000487215 NIPAL1Q6NVV3 410 aa18.16■□□□□ 0.5
SMPDL3A-202ENST00000487215 TMEM200AQ86VY9 491 aa18.16■□□□□ 0.5
SMPDL3A-202ENST00000487215 LMNTD2Q8IXW0 634 aa18.16■□□□□ 0.5
SMPDL3A-202ENST00000487215 CYP4Z2PQ8N1L4 340 aa18.16■□□□□ 0.5
SMPDL3A-202ENST00000487215 ZFP62Q8NB50 900 aaPredicted RBP18.16■□□□□ 0.5
SMPDL3A-202ENST00000487215 SPC24Q8NBT2 197 aa18.16■□□□□ 0.5
SMPDL3A-202ENST00000487215 NT5CQ8TCD5 201 aa18.16■□□□□ 0.5
SMPDL3A-202ENST00000487215 RND1Q92730 232 aa18.16■□□□□ 0.5
SMPDL3A-202ENST00000487215 PYCR2Q96C36 320 aa18.16■□□□□ 0.5
SMPDL3A-202ENST00000487215 NDNQ99608 321 aa18.16■□□□□ 0.5
SMPDL3A-202ENST00000487215 NECTIN3Q9NQS3 549 aa18.16■□□□□ 0.5
SMPDL3A-202ENST00000487215 PRDM9Q9NQV7 894 aa18.16■□□□□ 0.5
SMPDL3A-202ENST00000487215 USP27XA6NNY8 438 aa18.15■□□□□ 0.5
SMPDL3A-202ENST00000487215 A8MUA0 341 aa18.15■□□□□ 0.5
SMPDL3A-202ENST00000487215 SLC16A5O15375 505 aa18.15■□□□□ 0.5
SMPDL3A-202ENST00000487215 RGS4P49798 205 aa18.15■□□□□ 0.5
SMPDL3A-202ENST00000487215 NR0B1P51843 470 aaKnown RBP18.15■□□□□ 0.5
SMPDL3A-202ENST00000487215 RGS1Q08116 209 aa18.15■□□□□ 0.5
SMPDL3A-202ENST00000487215 UGT3A1Q6NUS8 523 aa18.15■□□□□ 0.5
SMPDL3A-202ENST00000487215 ARHGAP11AQ6P4F7 1023 aa18.15■□□□□ 0.5
SMPDL3A-202ENST00000487215 ABHD13Q7L211 337 aa18.15■□□□□ 0.5
SMPDL3A-202ENST00000487215 MDGA2Q7Z553 956 aa18.15■□□□□ 0.5
SMPDL3A-202ENST00000487215 STRA8Q7Z7C7 330 aa18.15■□□□□ 0.5
SMPDL3A-202ENST00000487215 CCDC71Q8IV32 467 aaPredicted RBP18.15■□□□□ 0.5
SMPDL3A-202ENST00000487215 PALM2Q8IXS6 379 aa18.15■□□□□ 0.5
SMPDL3A-202ENST00000487215 MYO1HQ8N1T3 1032 aa18.15■□□□□ 0.5
SMPDL3A-202ENST00000487215 AGGF1Q8N302 714 aaeCLIP18.15■□□□□ 0.5
SMPDL3A-202ENST00000487215 APCDD1LQ8NCL9 501 aa18.15■□□□□ 0.5
SMPDL3A-202ENST00000487215 OR52N2Q8NGI0 321 aa18.15■□□□□ 0.5
SMPDL3A-202ENST00000487215 CALML6Q8TD86 181 aa18.15■□□□□ 0.5
SMPDL3A-202ENST00000487215 UTP15Q8TED0 518 aaKnown RBP18.15■□□□□ 0.5
SMPDL3A-202ENST00000487215 SNF8Q96H20 258 aa18.15■□□□□ 0.5
SMPDL3A-202ENST00000487215 SERPINB12Q96P63 405 aa18.15■□□□□ 0.5
SMPDL3A-202ENST00000487215 OR4K3Q96R72 315 aa18.15■□□□□ 0.5
SMPDL3A-202ENST00000487215 ZNF559Q9BR84 538 aa18.15■□□□□ 0.5
SMPDL3A-202ENST00000487215 SPNS1Q9H2V7 528 aa18.15■□□□□ 0.5
SMPDL3A-202ENST00000487215 KCNJ16Q9NPI9 418 aa18.15■□□□□ 0.5
SMPDL3A-202ENST00000487215 TRBV11-1A0A0K0K1C0 115 aa18.14■□□□□ 0.49
SMPDL3A-202ENST00000487215 GOLGA8MH3BSY2 632 aa18.14■□□□□ 0.49
SMPDL3A-202ENST00000487215 PDE9AO76083 593 aa18.14■□□□□ 0.49
SMPDL3A-202ENST00000487215 NADKO95544 446 aaPredicted RBP18.14■□□□□ 0.49
SMPDL3A-202ENST00000487215 DNAJA1P31689 397 aaKnown RBP18.14■□□□□ 0.49
SMPDL3A-202ENST00000487215 RAB8AP61006 207 aa18.14■□□□□ 0.49
SMPDL3A-202ENST00000487215 EMC4Q5J8M3 183 aa18.14■□□□□ 0.49
SMPDL3A-202ENST00000487215 CATSPEREQ5SY80 951 aa18.14■□□□□ 0.49
SMPDL3A-202ENST00000487215 PAQR3Q6TCH7 311 aa18.14■□□□□ 0.49
SMPDL3A-202ENST00000487215 TMEM156Q8N614 296 aa18.14■□□□□ 0.49
SMPDL3A-202ENST00000487215 B3GNT7Q8NFL0 401 aa18.14■□□□□ 0.49
SMPDL3A-202ENST00000487215 OR56A3Q8NH54 315 aa18.14■□□□□ 0.49
SMPDL3A-202ENST00000487215 NRGNQ92686 78 aa18.14■□□□□ 0.49
SMPDL3A-202ENST00000487215 SEC16BQ96JE7 1060 aa18.14■□□□□ 0.49
SMPDL3A-202ENST00000487215 XAB2Q9HCS7 855 aaKnown RBP18.14■□□□□ 0.49
SMPDL3A-202ENST00000487215 ZFATQ9P243 1243 aa18.14■□□□□ 0.49
SMPDL3A-202ENST00000487215 KCNN3Q9UGI6 736 aa18.14■□□□□ 0.49
SMPDL3A-202ENST00000487215 ZFP69BQ9UJL9 534 aa18.14■□□□□ 0.49
SMPDL3A-202ENST00000487215 HCFC1P51610 2035 aa18.13■□□□□ 0.49
SMPDL3A-202ENST00000487215 CTAGE15A4D2H0 777 aa18.13■□□□□ 0.49
SMPDL3A-202ENST00000487215 PSMD12O00232 456 aaPredicted RBP18.13■□□□□ 0.49
SMPDL3A-202ENST00000487215 ITGA10O75578 1167 aa18.13■□□□□ 0.49
SMPDL3A-202ENST00000487215 HOXD4P09016 255 aaPredicted RBP18.13■□□□□ 0.49
SMPDL3A-202ENST00000487215 HIST1H2AGP0C0S8 130 aaPredicted RBP18.13■□□□□ 0.49
SMPDL3A-202ENST00000487215 RNH1P13489 461 aaKnown RBP18.13■□□□□ 0.49
SMPDL3A-202ENST00000487215 HIST1H2ADP20671 130 aa18.13■□□□□ 0.49
SMPDL3A-202ENST00000487215 HNF4AP41235 474 aa18.13■□□□□ 0.49
SMPDL3A-202ENST00000487215 SCTRP47872 440 aa18.13■□□□□ 0.49
SMPDL3A-202ENST00000487215 CLCN2P51788 898 aa18.13■□□□□ 0.49
SMPDL3A-202ENST00000487215 NUP107P57740 925 aa18.13■□□□□ 0.49
SMPDL3A-202ENST00000487215 HYAL2Q12891 473 aa18.13■□□□□ 0.49
SMPDL3A-202ENST00000487215 HSP90AA5PQ58FG0 334 aa18.13■□□□□ 0.49
SMPDL3A-202ENST00000487215 DUPD1Q68J44 220 aa18.13■□□□□ 0.49
SMPDL3A-202ENST00000487215 CTAGE6Q86UF2 777 aa18.13■□□□□ 0.49
SMPDL3A-202ENST00000487215 GAS2L3Q86XJ1 694 aa18.13■□□□□ 0.49
SMPDL3A-202ENST00000487215 TBC1D19Q8N5T2 526 aa18.13■□□□□ 0.49
SMPDL3A-202ENST00000487215 MCUQ8NE86 351 aa18.13■□□□□ 0.49
SMPDL3A-202ENST00000487215 LINGO1Q96FE5 620 aa18.13■□□□□ 0.49
SMPDL3A-202ENST00000487215 HIST1H2AHQ96KK5 128 aa18.13■□□□□ 0.49
SMPDL3A-202ENST00000487215 HIST1H2AJQ99878 128 aa18.13■□□□□ 0.49
SMPDL3A-202ENST00000487215 FAM167BQ9BTA0 163 aa18.13■□□□□ 0.49
SMPDL3A-202ENST00000487215 H2AFJQ9BTM1 129 aa18.13■□□□□ 0.49
SMPDL3A-202ENST00000487215 SLC6A16Q9GZN6 736 aa18.13■□□□□ 0.49
SMPDL3A-202ENST00000487215 RHBGQ9H310 441 aa18.13■□□□□ 0.49
SMPDL3A-202ENST00000487215 CLK4Q9HAZ1 481 aaKnown RBP18.13■□□□□ 0.49
SMPDL3A-202ENST00000487215 HOMER3Q9NSC5 361 aa18.13■□□□□ 0.49
SMPDL3A-202ENST00000487215 IARS2Q9NSE4 1012 aaKnown RBP18.13■□□□□ 0.49
SMPDL3A-202ENST00000487215 ARL15Q9NXU5 204 aa18.13■□□□□ 0.49
SMPDL3A-202ENST00000487215 TAS2R13Q9NYV9 303 aa18.13■□□□□ 0.49
SMPDL3A-202ENST00000487215 ZNF223Q9UK11 482 aaPredicted RBP18.13■□□□□ 0.49
SMPDL3A-202ENST00000487215 FBXW2Q9UKT8 454 aa18.13■□□□□ 0.49
SMPDL3A-202ENST00000487215 MAD1L1Q9Y6D9 718 aa18.13■□□□□ 0.49
SMPDL3A-202ENST00000487215 ITPR3Q14573 2671 aa18.13■□□□□ 0.49
SMPDL3A-202ENST00000487215 MYO1DO94832 1006 aa18.12■□□□□ 0.49
SMPDL3A-202ENST00000487215 KRT14P02533 472 aa18.12■□□□□ 0.49
SMPDL3A-202ENST00000487215 MAGEA3P43357 314 aa18.12■□□□□ 0.49
SMPDL3A-202ENST00000487215 PMPCAQ10713 525 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms