RNA–Protein interactions for RNA: ENST00000486618.1

HDAC3-209, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 711 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-209ENST00000486618 PIWIL2Q8TC59 973 aaKnown RBP6.54□□□□□ -1.36
HDAC3-209ENST00000486618 NSMCE1Q8WV22 266 aa6.54□□□□□ -1.36
HDAC3-209ENST00000486618 SCAMP4Q969E2 229 aa6.54□□□□□ -1.36
HDAC3-209ENST00000486618 RFKQ969G6 155 aa6.54□□□□□ -1.36
HDAC3-209ENST00000486618 ZNF566Q969W8 418 aa6.54□□□□□ -1.36
HDAC3-209ENST00000486618 ZDHHC12Q96GR4 267 aa6.54□□□□□ -1.36
HDAC3-209ENST00000486618 TCTN2Q96GX1 697 aa6.54□□□□□ -1.36
HDAC3-209ENST00000486618 COX14Q96I36 57 aa6.54□□□□□ -1.36
HDAC3-209ENST00000486618 ELMO2Q96JJ3 720 aa6.54□□□□□ -1.36
HDAC3-209ENST00000486618 TGM7Q96PF1 710 aa6.54□□□□□ -1.36
HDAC3-209ENST00000486618 MCCC1Q96RQ3 725 aaPredicted RBP6.54□□□□□ -1.36
HDAC3-209ENST00000486618 TEX12Q9BXU0 123 aa6.54□□□□□ -1.36
HDAC3-209ENST00000486618 PRDM13Q9H4Q3 707 aa6.54□□□□□ -1.36
HDAC3-209ENST00000486618 SPACA1Q9HBV2 294 aa6.54□□□□□ -1.36
HDAC3-209ENST00000486618 SNX15Q9NRS6 342 aa6.54□□□□□ -1.36
HDAC3-209ENST00000486618 FARSBQ9NSD9 589 aaKnown RBP6.54□□□□□ -1.36
HDAC3-209ENST00000486618 SPTLC3Q9NUV7 552 aa6.54□□□□□ -1.36
HDAC3-209ENST00000486618 SDAD1Q9NVU7 687 aaKnown RBP eCLIP6.54□□□□□ -1.36
HDAC3-209ENST00000486618 C5AR2Q9P296 337 aa6.54□□□□□ -1.36
HDAC3-209ENST00000486618 CD84Q9UIB8 345 aa6.54□□□□□ -1.36
HDAC3-209ENST00000486618 NOCTQ9UK39 431 aaKnown RBP6.54□□□□□ -1.36
HDAC3-209ENST00000486618 RARRES3Q9UL19 164 aa6.54□□□□□ -1.36
HDAC3-209ENST00000486618 DNPEPQ9ULA0 475 aa6.54□□□□□ -1.36
HDAC3-209ENST00000486618 KCNK6Q9Y257 313 aa6.54□□□□□ -1.36
HDAC3-209ENST00000486618 CHKBQ9Y259 395 aa6.54□□□□□ -1.36
HDAC3-209ENST00000486618 FARSAQ9Y285 508 aaKnown RBP6.54□□□□□ -1.36
HDAC3-209ENST00000486618 PPIL1Q9Y3C6 166 aa6.54□□□□□ -1.36
HDAC3-209ENST00000486618 PCDHB14Q9Y5E9 798 aa6.54□□□□□ -1.36
HDAC3-209ENST00000486618 DMRT1Q9Y5R6 373 aa6.54□□□□□ -1.36
HDAC3-209ENST00000486618 FAM169AQ9Y6X4 670 aa6.54□□□□□ -1.36
HDAC3-209ENST00000486618 SPTBP11277 2137 aa6.53□□□□□ -1.36
HDAC3-209ENST00000486618 PIKFYVEQ9Y2I7 2098 aa6.53□□□□□ -1.36
HDAC3-209ENST00000486618 SETD2Q9BYW2 2564 aaPredicted RBP6.53□□□□□ -1.36
HDAC3-209ENST00000486618 C1orf232A0A0U1RR37 186 aa6.53□□□□□ -1.36
HDAC3-209ENST00000486618 SSU72P8A0A1W2PR75 194 aa6.53□□□□□ -1.36
HDAC3-209ENST00000486618 A0A1W2PRV1 198 aa6.53□□□□□ -1.36
HDAC3-209ENST00000486618 ANKUB1A6NFN9 424 aa6.53□□□□□ -1.36
HDAC3-209ENST00000486618 FOXO6A8MYZ6 492 aa6.53□□□□□ -1.36
HDAC3-209ENST00000486618 F8W8V4 182 aa6.53□□□□□ -1.36
HDAC3-209ENST00000486618 PEX1O43933 1283 aa6.53□□□□□ -1.36
HDAC3-209ENST00000486618 H2AFYO75367 372 aaKnown RBP6.53□□□□□ -1.36
HDAC3-209ENST00000486618 CEACAM4O75871 244 aa6.53□□□□□ -1.36
HDAC3-209ENST00000486618 PGLSO95336 258 aa6.53□□□□□ -1.36
HDAC3-209ENST00000486618 CBX6O95503 412 aa6.53□□□□□ -1.36
HDAC3-209ENST00000486618 FTCDO95954 541 aa6.53□□□□□ -1.36
HDAC3-209ENST00000486618 CLPTM1O96005 669 aa6.53□□□□□ -1.36
HDAC3-209ENST00000486618 SOD1P00441 154 aa6.53□□□□□ -1.36
HDAC3-209ENST00000486618 ATP1A1P05023 1023 aaKnown RBP6.53□□□□□ -1.36
HDAC3-209ENST00000486618 ALOX5P09917 674 aa6.53□□□□□ -1.36
HDAC3-209ENST00000486618 UNGP13051 313 aaPredicted RBP6.53□□□□□ -1.36
HDAC3-209ENST00000486618 CHRNB2P17787 502 aa6.53□□□□□ -1.36
HDAC3-209ENST00000486618 CTPS1P17812 591 aa6.53□□□□□ -1.36
HDAC3-209ENST00000486618 ERCC2P18074 760 aa6.53□□□□□ -1.36
HDAC3-209ENST00000486618 CTSSP25774 331 aa6.53□□□□□ -1.36
HDAC3-209ENST00000486618 GDNFP39905 211 aa6.53□□□□□ -1.36
HDAC3-209ENST00000486618 RANBP1P43487 201 aa6.53□□□□□ -1.36
HDAC3-209ENST00000486618 CAMLGP49069 296 aa6.53□□□□□ -1.36
HDAC3-209ENST00000486618 CLCNKAP51800 687 aa6.53□□□□□ -1.36
HDAC3-209ENST00000486618 PER3P56645 1201 aa6.53□□□□□ -1.36
HDAC3-209ENST00000486618 PPP2R2AP63151 447 aa6.53□□□□□ -1.36
HDAC3-209ENST00000486618 FMO1Q01740 532 aa6.53□□□□□ -1.36
HDAC3-209ENST00000486618 DSC2Q02487 901 aa6.53□□□□□ -1.36
HDAC3-209ENST00000486618 HSPA14Q0VDF9 509 aa6.53□□□□□ -1.36
HDAC3-209ENST00000486618 TRAF2Q12933 501 aa6.53□□□□□ -1.36
HDAC3-209ENST00000486618 PTP4A2Q12974 167 aa6.53□□□□□ -1.36
HDAC3-209ENST00000486618 GPS1Q13098 491 aa6.53□□□□□ -1.36
HDAC3-209ENST00000486618 PDK1Q15118 436 aa6.53□□□□□ -1.36
HDAC3-209ENST00000486618 ZMYND11Q15326 602 aa6.53□□□□□ -1.36
HDAC3-209ENST00000486618 PRR30Q53SZ7 412 aaPredicted RBP6.53□□□□□ -1.36
HDAC3-209ENST00000486618 ERMARDQ5T6L9 678 aa6.53□□□□□ -1.36
HDAC3-209ENST00000486618 CPZQ66K79 652 aa6.53□□□□□ -1.36
HDAC3-209ENST00000486618 LRRC66Q68CR7 880 aa6.53□□□□□ -1.36
HDAC3-209ENST00000486618 GTF2IRD2BQ6EKJ0 949 aa6.53□□□□□ -1.36
HDAC3-209ENST00000486618 DPY19L2P1Q6NXN4 242 aa6.53□□□□□ -1.36
HDAC3-209ENST00000486618 DNAJC24Q6P3W2 148 aa6.53□□□□□ -1.36
HDAC3-209ENST00000486618 METAP1DQ6UB28 335 aaPredicted RBP6.53□□□□□ -1.36
HDAC3-209ENST00000486618 TSPAN33Q86UF1 283 aa6.53□□□□□ -1.36
HDAC3-209ENST00000486618 GTF2IRD2Q86UP8 949 aa6.53□□□□□ -1.36
HDAC3-209ENST00000486618 PHF13Q86YI8 300 aaPredicted RBP6.53□□□□□ -1.36
HDAC3-209ENST00000486618 ARHGAP12Q8IWW6 846 aa6.53□□□□□ -1.36
HDAC3-209ENST00000486618 Q8NA96 180 aa6.53□□□□□ -1.36
HDAC3-209ENST00000486618 POMGNT2Q8NAT1 580 aa6.53□□□□□ -1.36
HDAC3-209ENST00000486618 SIDT2Q8NBJ9 832 aaKnown RBP6.53□□□□□ -1.36
HDAC3-209ENST00000486618 OR9A1PQ8NGU1 263 aa6.53□□□□□ -1.36
HDAC3-209ENST00000486618 SLC20A1Q8WUM9 679 aa6.53□□□□□ -1.36
HDAC3-209ENST00000486618 KLHL6Q8WZ60 621 aa6.53□□□□□ -1.36
HDAC3-209ENST00000486618 JADE3Q92613 823 aa6.53□□□□□ -1.36
HDAC3-209ENST00000486618 THRSPQ92748 146 aa6.53□□□□□ -1.36
HDAC3-209ENST00000486618 RNF31Q96EP0 1072 aa6.53□□□□□ -1.36
HDAC3-209ENST00000486618 NSMCE3Q96MG7 304 aa6.53□□□□□ -1.36
HDAC3-209ENST00000486618 MCEEQ96PE7 176 aa6.53□□□□□ -1.36
HDAC3-209ENST00000486618 LMF1Q96S06 567 aa6.53□□□□□ -1.36
HDAC3-209ENST00000486618 SELENOSQ9BQE4 189 aa6.53□□□□□ -1.36
HDAC3-209ENST00000486618 TUBGCP2Q9BSJ2 902 aa6.53□□□□□ -1.36
HDAC3-209ENST00000486618 RIOK2Q9BVS4 552 aaKnown RBP6.53□□□□□ -1.36
HDAC3-209ENST00000486618 ITPAQ9BY32 194 aa6.53□□□□□ -1.36
HDAC3-209ENST00000486618 GPR63Q9BZJ6 419 aa6.53□□□□□ -1.36
HDAC3-209ENST00000486618 FAM129AQ9BZQ8 928 aa6.53□□□□□ -1.36
HDAC3-209ENST00000486618 RIBC2Q9H4K1 309 aa6.53□□□□□ -1.36
HDAC3-209ENST00000486618 DHX35Q9H5Z1 703 aaKnown RBP6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms