RNA–Protein interactions for RNA: ENST00000485628.2

APOE-205, Transcript of apolipoprotein E, humanhuman

TSL 1 (best)

Gene APOE, Length 771 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOE-205ENST00000485628 RGMAQ96B86 450 aa15.04■□□□□ -0
APOE-205ENST00000485628 MVB12AQ96EY5 273 aa15.04■□□□□ -0
APOE-205ENST00000485628 OR52B2Q96RD2 323 aa15.04■□□□□ -0
APOE-205ENST00000485628 EBF4Q9BQW3 602 aa15.04■□□□□ -0
APOE-205ENST00000485628 TBCDQ9BTW9 1192 aa15.04■□□□□ -0
APOE-205ENST00000485628 CCDC28BQ9BUN5 200 aa15.04■□□□□ -0
APOE-205ENST00000485628 MRPL1Q9BYD6 325 aaKnown RBP15.04■□□□□ -0
APOE-205ENST00000485628 WDR55Q9H6Y2 383 aaPredicted RBP15.04■□□□□ -0
APOE-205ENST00000485628 FANCEQ9HB96 536 aa15.04■□□□□ -0
APOE-205ENST00000485628 NPHS2Q9NP85 383 aa15.04■□□□□ -0
APOE-205ENST00000485628 PFDN4Q9NQP4 134 aa15.04■□□□□ -0
APOE-205ENST00000485628 NMRK1Q9NWW6 199 aa15.04■□□□□ -0
APOE-205ENST00000485628 C1orf109Q9NX04 203 aa15.04■□□□□ -0
APOE-205ENST00000485628 ASIC5Q9NY37 505 aa15.04■□□□□ -0
APOE-205ENST00000485628 SLC12A4Q9UP95 1085 aa15.04■□□□□ -0
APOE-205ENST00000485628 A0A0A6YYD5 115 aa15.03■□□□□ -0
APOE-205ENST00000485628 ATP6AP2A0A1C7CYW4 349 aa15.03■□□□□ -0
APOE-205ENST00000485628 URADA6NGE7 173 aa15.03■□□□□ -0
APOE-205ENST00000485628 POLR1CO15160 346 aaPredicted RBP15.03■□□□□ -0
APOE-205ENST00000485628 GALR3O60755 368 aaPredicted RBP15.03■□□□□ -0
APOE-205ENST00000485628 ATP6AP2O75787 350 aa15.03■□□□□ -0
APOE-205ENST00000485628 EIF2S1P05198 315 aaKnown RBP15.03■□□□□ -0
APOE-205ENST00000485628 ALOX12P18054 663 aa15.03■□□□□ -0
APOE-205ENST00000485628 TPP2P29144 1249 aaPredicted RBP15.03■□□□□ -0
APOE-205ENST00000485628 EPHA3P29320 983 aa15.03■□□□□ -0
APOE-205ENST00000485628 RORAP35398 523 aa15.03■□□□□ -0
APOE-205ENST00000485628 ARSFP54793 590 aa15.03■□□□□ -0
APOE-205ENST00000485628 RAB15P59190 212 aa15.03■□□□□ -0
APOE-205ENST00000485628 HERC3Q15034 1050 aa15.03■□□□□ -0
APOE-205ENST00000485628 AP5B1Q2VPB7 878 aa15.03■□□□□ -0
APOE-205ENST00000485628 LSM12Q3MHD2 195 aaKnown RBP15.03■□□□□ -0
APOE-205ENST00000485628 OR4C11Q6IEV9 310 aa15.03■□□□□ -0
APOE-205ENST00000485628 ZNF517Q6ZMY9 492 aaPredicted RBP15.03■□□□□ -0
APOE-205ENST00000485628 PRSS41Q7RTY9 318 aa15.03■□□□□ -0
APOE-205ENST00000485628 DDIASQ8IXT1 998 aa15.03■□□□□ -0
APOE-205ENST00000485628 ZCCHC7Q8N3Z6 543 aaKnown RBP15.03■□□□□ -0
APOE-205ENST00000485628 PPP3R2Q96LZ3 170 aa15.03■□□□□ -0
APOE-205ENST00000485628 LRFN5Q96NI6 719 aa15.03■□□□□ -0
APOE-205ENST00000485628 KCNC2Q96PR1 638 aa15.03■□□□□ -0
APOE-205ENST00000485628 TAAR9Q96RI9 348 aa15.03■□□□□ -0
APOE-205ENST00000485628 CCT8L2Q96SF2 557 aa15.03■□□□□ -0
APOE-205ENST00000485628 ZPBPQ9BS86 351 aa15.03■□□□□ -0
APOE-205ENST00000485628 NLNQ9BYT8 704 aa15.03■□□□□ -0
APOE-205ENST00000485628 CLK4Q9HAZ1 481 aaKnown RBP15.03■□□□□ -0
APOE-205ENST00000485628 LRTM1Q9HBL6 345 aa15.03■□□□□ -0
APOE-205ENST00000485628 CUTCQ9NTM9 273 aa15.03■□□□□ -0
APOE-205ENST00000485628 RIC8BQ9NVN3 520 aa15.03■□□□□ -0
APOE-205ENST00000485628 SLC39A1Q9NY26 324 aa15.03■□□□□ -0
APOE-205ENST00000485628 AKAP7Q9P0M2 348 aaPredicted RBP15.03■□□□□ -0
APOE-205ENST00000485628 GIMAP2Q9UG22 337 aa15.03■□□□□ -0
APOE-205ENST00000485628 TMED5Q9Y3A6 229 aa15.03■□□□□ -0
APOE-205ENST00000485628 TMEM184BQ9Y519 407 aaPredicted RBP15.03■□□□□ -0
APOE-205ENST00000485628 FAM149AA5PLN7 773 aa15.02■□□□□ -0
APOE-205ENST00000485628 C9orf172C9J069 976 aa15.02■□□□□ -0
APOE-205ENST00000485628 ERI3O43414 337 aaKnown RBP15.02■□□□□ -0
APOE-205ENST00000485628 EEDO75530 441 aaKnown RBP15.02■□□□□ -0
APOE-205ENST00000485628 DXOO77932 396 aaKnown RBP15.02■□□□□ -0
APOE-205ENST00000485628 NSA2O95478 260 aaKnown RBP15.02■□□□□ -0
APOE-205ENST00000485628 FAM107AO95990 144 aa15.02■□□□□ -0
APOE-205ENST00000485628 ZNF888P0CJ79 500 aaPredicted RBP15.02■□□□□ -0
APOE-205ENST00000485628 TROVE2P10155 538 aaKnown RBP eCLIP15.02■□□□□ -0
APOE-205ENST00000485628 ATP5A1P25705 553 aaKnown RBP15.02■□□□□ -0
APOE-205ENST00000485628 MRPL19P49406 292 aaKnown RBP15.02■□□□□ -0
APOE-205ENST00000485628 EMX2Q04743 252 aa15.02■□□□□ -0
APOE-205ENST00000485628 FOXM1Q08050 763 aa15.02■□□□□ -0
APOE-205ENST00000485628 MUM1Q2TAK8 710 aa15.02■□□□□ -0
APOE-205ENST00000485628 SPIN4Q56A73 249 aa15.02■□□□□ -0
APOE-205ENST00000485628 ABHD13Q7L211 337 aa15.02■□□□□ -0
APOE-205ENST00000485628 COMMD6Q7Z4G1 85 aa15.02■□□□□ -0
APOE-205ENST00000485628 CLNKQ7Z7G1 428 aa15.02■□□□□ -0
APOE-205ENST00000485628 MARCH9Q86YJ5 346 aa15.02■□□□□ -0
APOE-205ENST00000485628 GPR135Q8IZ08 494 aa15.02■□□□□ -0
APOE-205ENST00000485628 DTWD1Q8N5C7 304 aa15.02■□□□□ -0
APOE-205ENST00000485628 C1orf52Q8N6N3 182 aaKnown RBP15.02■□□□□ -0
APOE-205ENST00000485628 CEP70Q8NHQ1 597 aa15.02■□□□□ -0
APOE-205ENST00000485628 CCT6BQ92526 530 aa15.02■□□□□ -0
APOE-205ENST00000485628 GBP5Q96PP8 586 aa15.02■□□□□ -0
APOE-205ENST00000485628 KCMF1Q9P0J7 381 aa15.02■□□□□ -0
APOE-205ENST00000485628 DCTN4Q9UJW0 460 aa15.02■□□□□ -0
APOE-205ENST00000485628 SRPK3Q9UPE1 567 aa15.02■□□□□ -0
APOE-205ENST00000485628 SATB2Q9UPW6 733 aa15.02■□□□□ -0
APOE-205ENST00000485628 B3GALT1Q9Y5Z6 326 aa15.02■□□□□ -0
APOE-205ENST00000485628 CDRT15L2A8MXV6 281 aa15.01□□□□□ -0.01
APOE-205ENST00000485628 SAP18O00422 153 aaKnown RBP15.01□□□□□ -0.01
APOE-205ENST00000485628 RTCAO00442 366 aaKnown RBP15.01□□□□□ -0.01
APOE-205ENST00000485628 DSCR3O14972 297 aa15.01□□□□□ -0.01
APOE-205ENST00000485628 DNAJB6O75190 326 aa15.01□□□□□ -0.01
APOE-205ENST00000485628 PEX11AO75192 247 aa15.01□□□□□ -0.01
APOE-205ENST00000485628 SH3BGRLO75368 114 aa15.01□□□□□ -0.01
APOE-205ENST00000485628 B3GALT4O96024 378 aa15.01□□□□□ -0.01
APOE-205ENST00000485628 SERPIND1P05546 499 aa15.01□□□□□ -0.01
APOE-205ENST00000485628 ALDOCP09972 364 aaKnown RBP15.01□□□□□ -0.01
APOE-205ENST00000485628 LBPP18428 481 aa15.01□□□□□ -0.01
APOE-205ENST00000485628 HIST1H1TP22492 207 aaPredicted RBP15.01□□□□□ -0.01
APOE-205ENST00000485628 PLA2G16P53816 162 aa15.01□□□□□ -0.01
APOE-205ENST00000485628 ERVK-8P63133 956 aa15.01□□□□□ -0.01
APOE-205ENST00000485628 RTP5Q14D33 572 aa15.01□□□□□ -0.01
APOE-205ENST00000485628 NDUFA9Q16795 377 aa15.01□□□□□ -0.01
APOE-205ENST00000485628 ATP6AP1LQ52LC2 224 aa15.01□□□□□ -0.01
APOE-205ENST00000485628 NIPAL1Q6NVV3 410 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms