RNA–Protein interactions for RNA: ENST00000485397.1

COL27A1-205, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 5

Gene COL27A1, Length 463 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-205ENST00000485397 SKP1P63208 163 aa18.02■□□□□ 0.48
COL27A1-205ENST00000485397 HYAL2Q12891 473 aa18.02■□□□□ 0.48
COL27A1-205ENST00000485397 RBBP5Q15291 538 aaKnown RBP18.02■□□□□ 0.48
COL27A1-205ENST00000485397 FAM45BPQ6NSW5 357 aa18.02■□□□□ 0.48
COL27A1-205ENST00000485397 QSOX2Q6ZRP7 698 aa18.02■□□□□ 0.48
COL27A1-205ENST00000485397 GDF7Q7Z4P5 450 aa18.02■□□□□ 0.48
COL27A1-205ENST00000485397 TMPRSS11BQ86T26 416 aa18.02■□□□□ 0.48
COL27A1-205ENST00000485397 THOC6Q86W42 341 aaKnown RBP18.02■□□□□ 0.48
COL27A1-205ENST00000485397 ZNF227Q86WZ6 799 aa18.02■□□□□ 0.48
COL27A1-205ENST00000485397 FAM98AQ8NCA5 519 aaKnown RBP18.02■□□□□ 0.48
COL27A1-205ENST00000485397 FAM45AQ8TCE6 357 aa18.02■□□□□ 0.48
COL27A1-205ENST00000485397 SMIM10Q96HG1 83 aa18.02■□□□□ 0.48
COL27A1-205ENST00000485397 TRIM51Q9BSJ1 452 aa18.02■□□□□ 0.48
COL27A1-205ENST00000485397 SLC6A16Q9GZN6 736 aa18.02■□□□□ 0.48
COL27A1-205ENST00000485397 AICDAQ9GZX7 198 aa18.02■□□□□ 0.48
COL27A1-205ENST00000485397 NECTIN3Q9NQS3 549 aa18.02■□□□□ 0.48
COL27A1-205ENST00000485397 SNX12Q9UMY4 172 aa18.02■□□□□ 0.48
COL27A1-205ENST00000485397 SLC22A14Q9Y267 594 aa18.02■□□□□ 0.48
COL27A1-205ENST00000485397 MEMO1Q9Y316 297 aa18.02■□□□□ 0.48
COL27A1-205ENST00000485397 DYRK1BQ9Y463 629 aa18.02■□□□□ 0.48
COL27A1-205ENST00000485397 SAGE2PA6NJ88 616 aa18.01■□□□□ 0.47
COL27A1-205ENST00000485397 C4orf51C9J302 202 aa18.01■□□□□ 0.47
COL27A1-205ENST00000485397 CDC7O00311 574 aa18.01■□□□□ 0.47
COL27A1-205ENST00000485397 NME2P1O60361 137 aa18.01■□□□□ 0.47
COL27A1-205ENST00000485397 POU3F2P20265 443 aaPredicted RBP18.01■□□□□ 0.47
COL27A1-205ENST00000485397 SAT1P21673 171 aa18.01■□□□□ 0.47
COL27A1-205ENST00000485397 NME2P22392 152 aa18.01■□□□□ 0.47
COL27A1-205ENST00000485397 PPP1R3AQ16821 1122 aa18.01■□□□□ 0.47
COL27A1-205ENST00000485397 NIPAL1Q6NVV3 410 aa18.01■□□□□ 0.47
COL27A1-205ENST00000485397 NXPE4Q6UWF7 544 aa18.01■□□□□ 0.47
COL27A1-205ENST00000485397 CHERPQ8IWX8 916 aaKnown RBP18.01■□□□□ 0.47
COL27A1-205ENST00000485397 CPSF7Q8N684 471 aaKnown RBP18.01■□□□□ 0.47
COL27A1-205ENST00000485397 NFAM1Q8NET5 270 aaPredicted RBP18.01■□□□□ 0.47
COL27A1-205ENST00000485397 PDLIM5Q96HC4 596 aaKnown RBP18.01■□□□□ 0.47
COL27A1-205ENST00000485397 PHF12Q96QT6 1004 aa18.01■□□□□ 0.47
COL27A1-205ENST00000485397 AIF1LQ9BQI0 150 aa18.01■□□□□ 0.47
COL27A1-205ENST00000485397 PELI2Q9HAT8 420 aa18.01■□□□□ 0.47
COL27A1-205ENST00000485397 CORO1CQ9ULV4 474 aaPredicted RBP18.01■□□□□ 0.47
COL27A1-205ENST00000485397 NCOA6Q14686 2063 aaPredicted RBP18.01■□□□□ 0.47
COL27A1-205ENST00000485397 IGKV3D-11A0A0A0MRZ8 115 aa18■□□□□ 0.47
COL27A1-205ENST00000485397 TCRBV16S1A1N1A0A5B0 115 aa18■□□□□ 0.47
COL27A1-205ENST00000485397 NPEPPSL1A6NEC2 478 aa18■□□□□ 0.47
COL27A1-205ENST00000485397 RNH1P13489 461 aaKnown RBP18■□□□□ 0.47
COL27A1-205ENST00000485397 ABOP16442 354 aa18■□□□□ 0.47
COL27A1-205ENST00000485397 AGAP20933 346 aa18■□□□□ 0.47
COL27A1-205ENST00000485397 CYB561P49447 251 aa18■□□□□ 0.47
COL27A1-205ENST00000485397 ITGA8P53708 1063 aa18■□□□□ 0.47
COL27A1-205ENST00000485397 TOR1AIP1Q5JTV8 583 aa18■□□□□ 0.47
COL27A1-205ENST00000485397 PDIK1LQ8N165 341 aa18■□□□□ 0.47
COL27A1-205ENST00000485397 CA13Q8N1Q1 262 aa18■□□□□ 0.47
COL27A1-205ENST00000485397 GHDCQ8N2G8 530 aa18■□□□□ 0.47
COL27A1-205ENST00000485397 TRPV3Q8NET8 790 aa18■□□□□ 0.47
COL27A1-205ENST00000485397 SLCO2A1Q92959 643 aa18■□□□□ 0.47
COL27A1-205ENST00000485397 MTFMTQ96DP5 389 aaKnown RBP18■□□□□ 0.47
COL27A1-205ENST00000485397 TRIM45Q9H8W5 580 aaPredicted RBP18■□□□□ 0.47
COL27A1-205ENST00000485397 PRDM9Q9NQV7 894 aa18■□□□□ 0.47
COL27A1-205ENST00000485397 ZFATQ9P243 1243 aa18■□□□□ 0.47
COL27A1-205ENST00000485397 APCP25054 2843 aa17.99■□□□□ 0.47
COL27A1-205ENST00000485397 URADA6NGE7 173 aa17.99■□□□□ 0.47
COL27A1-205ENST00000485397 PSMD12O00232 456 aaPredicted RBP17.99■□□□□ 0.47
COL27A1-205ENST00000485397 CES2O00748 559 aa17.99■□□□□ 0.47
COL27A1-205ENST00000485397 CDK2AP1O14519 115 aa17.99■□□□□ 0.47
COL27A1-205ENST00000485397 CLDN14O95500 239 aa17.99■□□□□ 0.47
COL27A1-205ENST00000485397 ZNF24P17028 368 aa17.99■□□□□ 0.47
COL27A1-205ENST00000485397 ZNF37AP17032 561 aaPredicted RBP17.99■□□□□ 0.47
COL27A1-205ENST00000485397 ZNF460Q14592 562 aa17.99■□□□□ 0.47
COL27A1-205ENST00000485397 STEAP4Q687X5 459 aa17.99■□□□□ 0.47
COL27A1-205ENST00000485397 C3P1Q6ZMU1 363 aa17.99■□□□□ 0.47
COL27A1-205ENST00000485397 FGD2Q7Z6J4 655 aa17.99■□□□□ 0.47
COL27A1-205ENST00000485397 DOLPP1Q86YN1 238 aa17.99■□□□□ 0.47
COL27A1-205ENST00000485397 ZNF295-AS1Q8N0V1 137 aa17.99■□□□□ 0.47
COL27A1-205ENST00000485397 CREB3L4Q8TEY5 395 aa17.99■□□□□ 0.47
COL27A1-205ENST00000485397 AGAP11Q8TF27 550 aa17.99■□□□□ 0.47
COL27A1-205ENST00000485397 LURAP1Q96LR2 239 aa17.99■□□□□ 0.47
COL27A1-205ENST00000485397 DEFB126Q9BYW3 111 aa17.99■□□□□ 0.47
COL27A1-205ENST00000485397 TRIM8Q9BZR9 551 aa17.99■□□□□ 0.47
COL27A1-205ENST00000485397 CLK4Q9HAZ1 481 aaKnown RBP17.99■□□□□ 0.47
COL27A1-205ENST00000485397 ASB1Q9Y576 335 aa17.99■□□□□ 0.47
COL27A1-205ENST00000485397 PSAT1Q9Y617 370 aa17.99■□□□□ 0.47
COL27A1-205ENST00000485397 TEX264Q9Y6I9 313 aa17.99■□□□□ 0.47
COL27A1-205ENST00000485397 KCNE2Q9Y6J6 123 aa17.99■□□□□ 0.47
COL27A1-205ENST00000485397 GTF3C1Q12789 2109 aa17.98■□□□□ 0.47
COL27A1-205ENST00000485397 SERPINA6P08185 405 aa17.98■□□□□ 0.47
COL27A1-205ENST00000485397 TRHRP34981 398 aaPredicted RBP17.98■□□□□ 0.47
COL27A1-205ENST00000485397 KIR3DL1P43629 444 aa17.98■□□□□ 0.47
COL27A1-205ENST00000485397 HLCSP50747 726 aa17.98■□□□□ 0.47
COL27A1-205ENST00000485397 BTN3A2P78410 334 aa17.98■□□□□ 0.47
COL27A1-205ENST00000485397 MORF4L2Q15014 288 aa17.98■□□□□ 0.47
COL27A1-205ENST00000485397 C18orf21Q32NC0 220 aaPredicted RBP17.98■□□□□ 0.47
COL27A1-205ENST00000485397 ANKMY2Q8IV38 441 aa17.98■□□□□ 0.47
COL27A1-205ENST00000485397 EGFL8Q99944 293 aa17.98■□□□□ 0.47
COL27A1-205ENST00000485397 A0A0G2JN53 185 aa17.97■□□□□ 0.47
COL27A1-205ENST00000485397 TRBV11-1A0A0K0K1C0 115 aa17.97■□□□□ 0.47
COL27A1-205ENST00000485397 PTGER1P34995 402 aa17.97■□□□□ 0.47
COL27A1-205ENST00000485397 RFC3P40938 356 aa17.97■□□□□ 0.47
COL27A1-205ENST00000485397 GDF5P43026 501 aa17.97■□□□□ 0.47
COL27A1-205ENST00000485397 MEOX1P50221 254 aa17.97■□□□□ 0.47
COL27A1-205ENST00000485397 TAS2R39P59534 338 aa17.97■□□□□ 0.47
COL27A1-205ENST00000485397 RUNX2Q13950 521 aa17.97■□□□□ 0.47
COL27A1-205ENST00000485397 ZC3HC1Q86WB0 502 aaKnown RBP17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms