RNA–Protein interactions for RNA: ENST00000485102.1

HDAC6-227, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-227ENST00000485102 TRBC2A0A5B9 178 aa12.18□□□□□ -0.46
HDAC6-227ENST00000485102 SAGE2PA6NJ88 616 aa12.18□□□□□ -0.46
HDAC6-227ENST00000485102 KLRC4-KLRK1H3BQV0 150 aa12.18□□□□□ -0.46
HDAC6-227ENST00000485102 PRMT3O60678 531 aa12.18□□□□□ -0.46
HDAC6-227ENST00000485102 CDC123O75794 336 aaPredicted RBP12.18□□□□□ -0.46
HDAC6-227ENST00000485102 HAUS5O94927 633 aa12.18□□□□□ -0.46
HDAC6-227ENST00000485102 CDH1P12830 882 aa12.18□□□□□ -0.46
HDAC6-227ENST00000485102 CD1EP15812 388 aa12.18□□□□□ -0.46
HDAC6-227ENST00000485102 AHRP35869 848 aa12.18□□□□□ -0.46
HDAC6-227ENST00000485102 CCR8P51685 355 aa12.18□□□□□ -0.46
HDAC6-227ENST00000485102 HSF1Q00613 529 aa12.18□□□□□ -0.46
HDAC6-227ENST00000485102 TFF3Q07654 80 aa12.18□□□□□ -0.46
HDAC6-227ENST00000485102 TERF2Q15554 542 aa12.18□□□□□ -0.46
HDAC6-227ENST00000485102 CYP1B1Q16678 543 aa12.18□□□□□ -0.46
HDAC6-227ENST00000485102 MAATS1Q7Z4T9 603 aa12.18□□□□□ -0.46
HDAC6-227ENST00000485102 KIF2BQ8N4N8 673 aa12.18□□□□□ -0.46
HDAC6-227ENST00000485102 ZFP62Q8NB50 900 aaPredicted RBP12.18□□□□□ -0.46
HDAC6-227ENST00000485102 OR56A3Q8NH54 315 aa12.18□□□□□ -0.46
HDAC6-227ENST00000485102 NT5CQ8TCD5 201 aa12.18□□□□□ -0.46
HDAC6-227ENST00000485102 EEF1AKMT1Q8WVE0 214 aa12.18□□□□□ -0.46
HDAC6-227ENST00000485102 MAGOHBQ96A72 148 aaKnown RBP12.18□□□□□ -0.46
HDAC6-227ENST00000485102 SNF8Q96H20 258 aa12.18□□□□□ -0.46
HDAC6-227ENST00000485102 PTCHD1Q96NR3 888 aa12.18□□□□□ -0.46
HDAC6-227ENST00000485102 ATG10Q9H0Y0 220 aa12.18□□□□□ -0.46
HDAC6-227ENST00000485102 TRMT6Q9UJA5 497 aaKnown RBP12.18□□□□□ -0.46
HDAC6-227ENST00000485102 ZFP69BQ9UJL9 534 aa12.18□□□□□ -0.46
HDAC6-227ENST00000485102 ADAMTS6Q9UKP5 1117 aa12.18□□□□□ -0.46
HDAC6-227ENST00000485102 PPIEQ9UNP9 301 aaKnown RBP12.18□□□□□ -0.46
HDAC6-227ENST00000485102 HRH3Q9Y5N1 445 aa12.18□□□□□ -0.46
HDAC6-227ENST00000485102 ZNF469Q96JG9 3925 aaPredicted RBP12.17□□□□□ -0.46
HDAC6-227ENST00000485102 ZNF860A6NHJ4 632 aa12.17□□□□□ -0.46
HDAC6-227ENST00000485102 FCHO1O14526 889 aa12.17□□□□□ -0.46
HDAC6-227ENST00000485102 ZNF500O60304 480 aaPredicted RBP12.17□□□□□ -0.46
HDAC6-227ENST00000485102 DNAJB6O75190 326 aa12.17□□□□□ -0.46
HDAC6-227ENST00000485102 HIST1H2AGP0C0S8 130 aaPredicted RBP12.17□□□□□ -0.46
HDAC6-227ENST00000485102 SMIM10L1P0DMW3 83 aa12.17□□□□□ -0.46
HDAC6-227ENST00000485102 HIST1H2ADP20671 130 aa12.17□□□□□ -0.46
HDAC6-227ENST00000485102 CHRNB4P30926 498 aa12.17□□□□□ -0.46
HDAC6-227ENST00000485102 PTGER1P34995 402 aa12.17□□□□□ -0.46
HDAC6-227ENST00000485102 ST13P50502 369 aaKnown RBP12.17□□□□□ -0.46
HDAC6-227ENST00000485102 ITGA8P53708 1063 aa12.17□□□□□ -0.46
HDAC6-227ENST00000485102 AP1S2P56377 157 aa12.17□□□□□ -0.46
HDAC6-227ENST00000485102 GPS1Q13098 491 aa12.17□□□□□ -0.46
HDAC6-227ENST00000485102 DEFB134Q4QY38 66 aa12.17□□□□□ -0.46
HDAC6-227ENST00000485102 CMPK2Q5EBM0 449 aa12.17□□□□□ -0.46
HDAC6-227ENST00000485102 ANKRD22Q5VYY1 191 aa12.17□□□□□ -0.46
HDAC6-227ENST00000485102 DUPD1Q68J44 220 aa12.17□□□□□ -0.46
HDAC6-227ENST00000485102 C3P1Q6ZMU1 363 aa12.17□□□□□ -0.46
HDAC6-227ENST00000485102 ABHD13Q7L211 337 aa12.17□□□□□ -0.46
HDAC6-227ENST00000485102 SPNS2Q8IVW8 549 aa12.17□□□□□ -0.46
HDAC6-227ENST00000485102 SULF2Q8IWU5 870 aa12.17□□□□□ -0.46
HDAC6-227ENST00000485102 PALM2Q8IXS6 379 aa12.17□□□□□ -0.46
HDAC6-227ENST00000485102 TBC1D19Q8N5T2 526 aa12.17□□□□□ -0.46
HDAC6-227ENST00000485102 APCDD1LQ8NCL9 501 aa12.17□□□□□ -0.46
HDAC6-227ENST00000485102 SMIM10Q96HG1 83 aa12.17□□□□□ -0.46
HDAC6-227ENST00000485102 HIST1H2AHQ96KK5 128 aa12.17□□□□□ -0.46
HDAC6-227ENST00000485102 SIGLEC10Q96LC7 697 aa12.17□□□□□ -0.46
HDAC6-227ENST00000485102 SERPINB12Q96P63 405 aa12.17□□□□□ -0.46
HDAC6-227ENST00000485102 HIST1H2AJQ99878 128 aa12.17□□□□□ -0.46
HDAC6-227ENST00000485102 H2AFJQ9BTM1 129 aa12.17□□□□□ -0.46
HDAC6-227ENST00000485102 SLC24A3Q9HC58 644 aa12.17□□□□□ -0.46
HDAC6-227ENST00000485102 PRDM9Q9NQV7 894 aa12.17□□□□□ -0.46
HDAC6-227ENST00000485102 C20orf96Q9NUD7 363 aaPredicted RBP12.17□□□□□ -0.46
HDAC6-227ENST00000485102 TAS2R13Q9NYV9 303 aa12.17□□□□□ -0.46
HDAC6-227ENST00000485102 PRRC2AP48634 2157 aaKnown RBP12.16□□□□□ -0.46
HDAC6-227ENST00000485102 A0A1B0GTH9 108 aa12.16□□□□□ -0.46
HDAC6-227ENST00000485102 URADA6NGE7 173 aa12.16□□□□□ -0.46
HDAC6-227ENST00000485102 ESPNB1AK53 854 aa12.16□□□□□ -0.46
HDAC6-227ENST00000485102 TFECO14948 347 aaPredicted RBP12.16□□□□□ -0.46
HDAC6-227ENST00000485102 NDUFS4O43181 175 aa12.16□□□□□ -0.46
HDAC6-227ENST00000485102 ZNHIT1O43257 154 aa12.16□□□□□ -0.46
HDAC6-227ENST00000485102 OR1F1O43749 312 aa12.16□□□□□ -0.46
HDAC6-227ENST00000485102 PEX1O43933 1283 aa12.16□□□□□ -0.46
HDAC6-227ENST00000485102 URI1O94763 535 aaPredicted RBP12.16□□□□□ -0.46
HDAC6-227ENST00000485102 TOXO94900 526 aa12.16□□□□□ -0.46
HDAC6-227ENST00000485102 KRT14P02533 472 aa12.16□□□□□ -0.46
HDAC6-227ENST00000485102 TFEBP19484 476 aa12.16□□□□□ -0.46
HDAC6-227ENST00000485102 DEKP35659 375 aaKnown RBP12.16□□□□□ -0.46
HDAC6-227ENST00000485102 SCTRP47872 440 aa12.16□□□□□ -0.46
HDAC6-227ENST00000485102 MEOX1P50221 254 aa12.16□□□□□ -0.46
HDAC6-227ENST00000485102 BTG2P78543 158 aa12.16□□□□□ -0.46
HDAC6-227ENST00000485102 RGS1Q08116 209 aa12.16□□□□□ -0.46
HDAC6-227ENST00000485102 DHX9Q08211 1270 aaKnown RBP12.16□□□□□ -0.46
HDAC6-227ENST00000485102 PHKG1Q16816 387 aa12.16□□□□□ -0.46
HDAC6-227ENST00000485102 BBS9Q3SYG4 887 aa12.16□□□□□ -0.46
HDAC6-227ENST00000485102 HSP90AA5PQ58FG0 334 aa12.16□□□□□ -0.46
HDAC6-227ENST00000485102 ARHGAP11AQ6P4F7 1023 aa12.16□□□□□ -0.46
HDAC6-227ENST00000485102 CCDC137Q6PK04 289 aaKnown RBP12.16□□□□□ -0.46
HDAC6-227ENST00000485102 MBOAT1Q6ZNC8 495 aa12.16□□□□□ -0.46
HDAC6-227ENST00000485102 CD163Q86VB7 1156 aa12.16□□□□□ -0.46
HDAC6-227ENST00000485102 CREG2Q8IUH2 290 aa12.16□□□□□ -0.46
HDAC6-227ENST00000485102 DMRTC2Q8IXT2 367 aaPredicted RBP12.16□□□□□ -0.46
HDAC6-227ENST00000485102 MYO1HQ8N1T3 1032 aa12.16□□□□□ -0.46
HDAC6-227ENST00000485102 MARVELD2Q8N4S9 558 aa12.16□□□□□ -0.46
HDAC6-227ENST00000485102 CEP112Q8N8E3 955 aa12.16□□□□□ -0.46
HDAC6-227ENST00000485102 C2CD4AQ8NCU7 369 aaPredicted RBP12.16□□□□□ -0.46
HDAC6-227ENST00000485102 UTP15Q8TED0 518 aaKnown RBP12.16□□□□□ -0.46
HDAC6-227ENST00000485102 ZNF592Q92610 1267 aa12.16□□□□□ -0.46
HDAC6-227ENST00000485102 SLCO2A1Q92959 643 aa12.16□□□□□ -0.46
HDAC6-227ENST00000485102 OR4K3Q96R72 315 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms