RNA–Protein interactions for RNA: ENST00000484309.5

MSH5-216, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 857 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-216ENST00000484309 SH3BGRLO75368 114 aa11.57□□□□□ -0.56
MSH5-216ENST00000484309 KLHL2O95198 593 aa11.57□□□□□ -0.56
MSH5-216ENST00000484309 SERPINA7P05543 415 aa11.57□□□□□ -0.56
MSH5-216ENST00000484309 FHP07954 510 aa11.57□□□□□ -0.56
MSH5-216ENST00000484309 SERPINA6P08185 405 aa11.57□□□□□ -0.56
MSH5-216ENST00000484309 MTHFD2P13995 350 aa11.57□□□□□ -0.56
MSH5-216ENST00000484309 SKP1P63208 163 aa11.57□□□□□ -0.56
MSH5-216ENST00000484309 BTN3A2P78410 334 aa11.57□□□□□ -0.56
MSH5-216ENST00000484309 RHAGQ02094 409 aa11.57□□□□□ -0.56
MSH5-216ENST00000484309 IRF8Q02556 426 aa11.57□□□□□ -0.56
MSH5-216ENST00000484309 ABRAXAS2Q15018 415 aa11.57□□□□□ -0.56
MSH5-216ENST00000484309 FAM83EQ2M2I3 478 aa11.57□□□□□ -0.56
MSH5-216ENST00000484309 SFT2D3Q587I9 215 aa11.57□□□□□ -0.56
MSH5-216ENST00000484309 B3GNTL1Q67FW5 361 aaPredicted RBP11.57□□□□□ -0.56
MSH5-216ENST00000484309 ISLR2Q6UXK2 745 aa11.57□□□□□ -0.56
MSH5-216ENST00000484309 LRRC70Q7Z2Q7 622 aa11.57□□□□□ -0.56
MSH5-216ENST00000484309 CUZD1Q86UP6 607 aa11.57□□□□□ -0.56
MSH5-216ENST00000484309 ATCAYQ86WG3 371 aa11.57□□□□□ -0.56
MSH5-216ENST00000484309 CA13Q8N1Q1 262 aa11.57□□□□□ -0.56
MSH5-216ENST00000484309 CISD2Q8N5K1 135 aaKnown RBP11.57□□□□□ -0.56
MSH5-216ENST00000484309 PSMF1Q92530 271 aa11.57□□□□□ -0.56
MSH5-216ENST00000484309 TBC1D20Q96BZ9 403 aa11.57□□□□□ -0.56
MSH5-216ENST00000484309 PTCD3Q96EY7 689 aaKnown RBP11.57□□□□□ -0.56
MSH5-216ENST00000484309 WDR77Q9BQA1 342 aaPredicted RBP11.57□□□□□ -0.56
MSH5-216ENST00000484309 TUBB6Q9BUF5 446 aa11.57□□□□□ -0.56
MSH5-216ENST00000484309 CAPS2Q9BXY5 557 aa11.57□□□□□ -0.56
MSH5-216ENST00000484309 FUT8Q9BYC5 575 aa11.57□□□□□ -0.56
MSH5-216ENST00000484309 TSPYL1Q9H0U9 437 aa11.57□□□□□ -0.56
MSH5-216ENST00000484309 EPS8L2Q9H6S3 715 aa11.57□□□□□ -0.56
MSH5-216ENST00000484309 PLA2G3Q9NZ20 509 aa11.57□□□□□ -0.56
MSH5-216ENST00000484309 CPSF2Q9P2I0 782 aaKnown RBP11.57□□□□□ -0.56
MSH5-216ENST00000484309 OPTCQ9UBM4 332 aa11.57□□□□□ -0.56
MSH5-216ENST00000484309 C19orf25Q9UFG5 118 aaPredicted RBP11.57□□□□□ -0.56
MSH5-216ENST00000484309 ZNF490Q9ULM2 529 aaPredicted RBP11.57□□□□□ -0.56
MSH5-216ENST00000484309 IKBKGQ9Y6K9 419 aa11.57□□□□□ -0.56
MSH5-216ENST00000484309 A0A087WUV0 522 aaPredicted RBP11.56□□□□□ -0.56
MSH5-216ENST00000484309 A0A1W2PQ72 361 aa11.56□□□□□ -0.56
MSH5-216ENST00000484309 ANKDD1BA6NHY2 528 aa11.56□□□□□ -0.56
MSH5-216ENST00000484309 TRIM49D1C9J1S8 452 aa11.56□□□□□ -0.56
MSH5-216ENST00000484309 FAM227AF5H4B4 570 aa11.56□□□□□ -0.56
MSH5-216ENST00000484309 WFS1O76024 890 aa11.56□□□□□ -0.56
MSH5-216ENST00000484309 TBX6O95947 436 aaPredicted RBP11.56□□□□□ -0.56
MSH5-216ENST00000484309 FAM153BP0C7A2 387 aa11.56□□□□□ -0.56
MSH5-216ENST00000484309 SMIM10L1P0DMW3 83 aa11.56□□□□□ -0.56
MSH5-216ENST00000484309 PCNAP12004 261 aa11.56□□□□□ -0.56
MSH5-216ENST00000484309 GFAPP14136 432 aa11.56□□□□□ -0.56
MSH5-216ENST00000484309 GNLYP22749 145 aa11.56□□□□□ -0.56
MSH5-216ENST00000484309 MSH2P43246 934 aa11.56□□□□□ -0.56
MSH5-216ENST00000484309 ST13P50502 369 aaKnown RBP11.56□□□□□ -0.56
MSH5-216ENST00000484309 PLA2G16P53816 162 aa11.56□□□□□ -0.56
MSH5-216ENST00000484309 STXBP1P61764 594 aaKnown RBP11.56□□□□□ -0.56
MSH5-216ENST00000484309 BTG2P78543 158 aa11.56□□□□□ -0.56
MSH5-216ENST00000484309 PTPN13Q12923 2485 aa11.56□□□□□ -0.56
MSH5-216ENST00000484309 MFAP5Q13361 173 aa11.56□□□□□ -0.56
MSH5-216ENST00000484309 NSDHLQ15738 373 aa11.56□□□□□ -0.56
MSH5-216ENST00000484309 PFKFB4Q16877 469 aa11.56□□□□□ -0.56
MSH5-216ENST00000484309 BTBD16Q32M84 506 aa11.56□□□□□ -0.56
MSH5-216ENST00000484309 FAM153CQ494X1 144 aa11.56□□□□□ -0.56
MSH5-216ENST00000484309 Q6ZS92 163 aa11.56□□□□□ -0.56
MSH5-216ENST00000484309 IFT20Q8IY31 132 aa11.56□□□□□ -0.56
MSH5-216ENST00000484309 IQCKQ8N0W5 287 aa11.56□□□□□ -0.56
MSH5-216ENST00000484309 RNF175Q8N4F7 328 aa11.56□□□□□ -0.56
MSH5-216ENST00000484309 TEX9Q8N6V9 391 aa11.56□□□□□ -0.56
MSH5-216ENST00000484309 CATSPER1Q8NEC5 780 aa11.56□□□□□ -0.56
MSH5-216ENST00000484309 TTLQ8NG68 377 aa11.56□□□□□ -0.56
MSH5-216ENST00000484309 DNAJB14Q8TBM8 379 aa11.56□□□□□ -0.56
MSH5-216ENST00000484309 PPP4R1Q8TF05 950 aa11.56□□□□□ -0.56
MSH5-216ENST00000484309 UBTD2Q8WUN7 234 aa11.56□□□□□ -0.56
MSH5-216ENST00000484309 DCAKDQ8WVC6 231 aa11.56□□□□□ -0.56
MSH5-216ENST00000484309 GAL3ST3Q96A11 431 aa11.56□□□□□ -0.56
MSH5-216ENST00000484309 MS4A6EQ96DS6 147 aa11.56□□□□□ -0.56
MSH5-216ENST00000484309 SMIM10Q96HG1 83 aa11.56□□□□□ -0.56
MSH5-216ENST00000484309 FAR2Q96K12 515 aa11.56□□□□□ -0.56
MSH5-216ENST00000484309 IMMP1LQ96LU5 166 aa11.56□□□□□ -0.56
MSH5-216ENST00000484309 GPR78Q96P69 363 aa11.56□□□□□ -0.56
MSH5-216ENST00000484309 OR1F2PQ96R84 312 aa11.56□□□□□ -0.56
MSH5-216ENST00000484309 EFCAB11Q9BUY7 163 aa11.56□□□□□ -0.56
MSH5-216ENST00000484309 EHD1Q9H4M9 534 aa11.56□□□□□ -0.56
MSH5-216ENST00000484309 NT5DC2Q9H857 520 aa11.56□□□□□ -0.56
MSH5-216ENST00000484309 HIVEP3Q5T1R4 2406 aa11.56□□□□□ -0.56
MSH5-216ENST00000484309 EXOC1LA0A1B0GW35 172 aa11.55□□□□□ -0.56
MSH5-216ENST00000484309 LRIT2A6NDA9 550 aa11.55□□□□□ -0.56
MSH5-216ENST00000484309 SYCE1LA8MT33 242 aa11.55□□□□□ -0.56
MSH5-216ENST00000484309 A8MUI8 341 aa11.55□□□□□ -0.56
MSH5-216ENST00000484309 K7EPI3 171 aa11.55□□□□□ -0.56
MSH5-216ENST00000484309 PSMD12O00232 456 aaPredicted RBP11.55□□□□□ -0.56
MSH5-216ENST00000484309 PCDH17O14917 1159 aa11.55□□□□□ -0.56
MSH5-216ENST00000484309 VPS4BO75351 444 aa11.55□□□□□ -0.56
MSH5-216ENST00000484309 CLEC3AO75596 197 aa11.55□□□□□ -0.56
MSH5-216ENST00000484309 SIX3O95343 332 aaPredicted RBP11.55□□□□□ -0.56
MSH5-216ENST00000484309 RNH1P13489 461 aaKnown RBP11.55□□□□□ -0.56
MSH5-216ENST00000484309 MAOAP21397 527 aa11.55□□□□□ -0.56
MSH5-216ENST00000484309 CERS1P27544 350 aa11.55□□□□□ -0.56
MSH5-216ENST00000484309 SOX11P35716 441 aa11.55□□□□□ -0.56
MSH5-216ENST00000484309 MAGEA12P43365 314 aa11.55□□□□□ -0.56
MSH5-216ENST00000484309 SERPINB9P50453 376 aa11.55□□□□□ -0.56
MSH5-216ENST00000484309 OR4D2P58180 307 aa11.55□□□□□ -0.56
MSH5-216ENST00000484309 ARG2P78540 354 aa11.55□□□□□ -0.56
MSH5-216ENST00000484309 ACTN3Q08043 901 aaPredicted RBP11.55□□□□□ -0.56
MSH5-216ENST00000484309 DDX39BQ13838 428 aaKnown RBP11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms