RNA–Protein interactions for RNA: ENST00000484252.5

LIMS2-215, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 2,099 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-215ENST00000484252 A3GALT2U3KPV4 340 aa18.91■□□□□ 0.62
LIMS2-215ENST00000484252 AIREO43918 545 aa18.9■□□□□ 0.62
LIMS2-215ENST00000484252 VIPP01282 170 aa18.9■□□□□ 0.62
LIMS2-215ENST00000484252 ZNF8P17098 575 aaPredicted RBP18.9■□□□□ 0.62
LIMS2-215ENST00000484252 PPP5CP53041 499 aa18.9■□□□□ 0.62
LIMS2-215ENST00000484252 ATN1P54259 1190 aaPredicted RBP18.9■□□□□ 0.62
LIMS2-215ENST00000484252 TMEM115Q12893 351 aaPredicted RBP18.9■□□□□ 0.62
LIMS2-215ENST00000484252 SCARB2Q14108 478 aa18.9■□□□□ 0.62
LIMS2-215ENST00000484252 ZNF385BQ569K4 471 aa18.9■□□□□ 0.62
LIMS2-215ENST00000484252 TRIM40Q6P9F5 258 aa18.9■□□□□ 0.62
LIMS2-215ENST00000484252 LILRA6Q6PI73 481 aa18.9■□□□□ 0.62
LIMS2-215ENST00000484252 ANGPTL8Q6UXH0 198 aa18.9■□□□□ 0.62
LIMS2-215ENST00000484252 PLEKHG7Q6ZR37 379 aa18.9■□□□□ 0.62
LIMS2-215ENST00000484252 TMPRSS11BQ86T26 416 aa18.9■□□□□ 0.62
LIMS2-215ENST00000484252 NRSN1Q8IZ57 195 aa18.9■□□□□ 0.62
LIMS2-215ENST00000484252 EPHX3Q9H6B9 360 aa18.9■□□□□ 0.62
LIMS2-215ENST00000484252 DKK3Q9UBP4 350 aa18.9■□□□□ 0.62
LIMS2-215ENST00000484252 DYRK1BQ9Y463 629 aa18.9■□□□□ 0.62
LIMS2-215ENST00000484252 PCDHGA2Q9Y5H1 932 aa18.9■□□□□ 0.62
LIMS2-215ENST00000484252 HELZP42694 1942 aaKnown RBP18.9■□□□□ 0.62
LIMS2-215ENST00000484252 ABHD14A-ACY1A0A1B0GW23 586 aa18.89■□□□□ 0.62
LIMS2-215ENST00000484252 SH3BGRLO75368 114 aa18.89■□□□□ 0.62
LIMS2-215ENST00000484252 HLA-EP13747 358 aa18.89■□□□□ 0.62
LIMS2-215ENST00000484252 ETFAP13804 333 aa18.89■□□□□ 0.62
LIMS2-215ENST00000484252 TYRP14679 529 aa18.89■□□□□ 0.62
LIMS2-215ENST00000484252 POLR2EP19388 210 aaKnown RBP18.89■□□□□ 0.62
LIMS2-215ENST00000484252 NNMTP40261 264 aa18.89■□□□□ 0.62
LIMS2-215ENST00000484252 CTSKP43235 329 aa18.89■□□□□ 0.62
LIMS2-215ENST00000484252 HBA1P69905 142 aa18.89■□□□□ 0.62
LIMS2-215ENST00000484252 SPIBQ01892 262 aa18.89■□□□□ 0.62
LIMS2-215ENST00000484252 PDE7AQ13946 482 aa18.89■□□□□ 0.62
LIMS2-215ENST00000484252 ARHGEF6Q15052 776 aa18.89■□□□□ 0.62
LIMS2-215ENST00000484252 ZNF805Q5CZA5 627 aa18.89■□□□□ 0.62
LIMS2-215ENST00000484252 AGAP7PQ5VUJ5 663 aa18.89■□□□□ 0.62
LIMS2-215ENST00000484252 LAS2Q8IYD9 372 aa18.89■□□□□ 0.62
LIMS2-215ENST00000484252 LRIG1Q96JA1 1093 aa18.89■□□□□ 0.62
LIMS2-215ENST00000484252 DACH2Q96NX9 599 aa18.89■□□□□ 0.62
LIMS2-215ENST00000484252 RAD9AQ99638 391 aa18.89■□□□□ 0.62
LIMS2-215ENST00000484252 EHD1Q9H4M9 534 aa18.89■□□□□ 0.62
LIMS2-215ENST00000484252 GPATCH2Q9NW75 528 aa18.89■□□□□ 0.62
LIMS2-215ENST00000484252 IL36AQ9UHA7 158 aa18.89■□□□□ 0.62
LIMS2-215ENST00000484252 ENOPH1Q9UHY7 261 aa18.89■□□□□ 0.62
LIMS2-215ENST00000484252 GPR37L1O60883 481 aa18.89■□□□□ 0.61
LIMS2-215ENST00000484252 C1orf105O95561 183 aa18.89■□□□□ 0.61
LIMS2-215ENST00000484252 DDX6P26196 483 aaKnown RBP eCLIP18.89■□□□□ 0.61
LIMS2-215ENST00000484252 LIPAP38571 399 aa18.89■□□□□ 0.61
LIMS2-215ENST00000484252 PRIM2P49643 509 aa18.89■□□□□ 0.61
LIMS2-215ENST00000484252 TIGD6Q17RP2 521 aa18.89■□□□□ 0.61
LIMS2-215ENST00000484252 ZNF630Q2M218 657 aaPredicted RBP18.89■□□□□ 0.61
LIMS2-215ENST00000484252 ZNF404Q494X3 552 aa18.89■□□□□ 0.61
LIMS2-215ENST00000484252 COX20Q5RI15 118 aa18.89■□□□□ 0.61
LIMS2-215ENST00000484252 HIST2H2AA3Q6FI13 130 aa18.89■□□□□ 0.61
LIMS2-215ENST00000484252 TMEM220Q6QAJ8 160 aa18.89■□□□□ 0.61
LIMS2-215ENST00000484252 USP43Q70EL4 1123 aa18.89■□□□□ 0.61
LIMS2-215ENST00000484252 COMMD6Q7Z4G1 85 aa18.89■□□□□ 0.61
LIMS2-215ENST00000484252 TMCO2Q7Z6W1 182 aaPredicted RBP18.89■□□□□ 0.61
LIMS2-215ENST00000484252 KIAA0907Q7Z7F0 614 aaPredicted RBP18.89■□□□□ 0.61
LIMS2-215ENST00000484252 LACC1Q8IV20 430 aa18.89■□□□□ 0.61
LIMS2-215ENST00000484252 LGI4Q8N135 537 aa18.89■□□□□ 0.61
LIMS2-215ENST00000484252 LILRA3Q8N6C8 439 aaPredicted RBP18.89■□□□□ 0.61
LIMS2-215ENST00000484252 GGHQ92820 318 aa18.89■□□□□ 0.61
LIMS2-215ENST00000484252 FOXJ1Q92949 421 aa18.89■□□□□ 0.61
LIMS2-215ENST00000484252 PPCDCQ96CD2 204 aa18.89■□□□□ 0.61
LIMS2-215ENST00000484252 MTERF3Q96E29 417 aa18.89■□□□□ 0.61
LIMS2-215ENST00000484252 MYNNQ9NPC7 610 aa18.89■□□□□ 0.61
LIMS2-215ENST00000484252 SPHK2Q9NRA0 654 aa18.89■□□□□ 0.61
LIMS2-215ENST00000484252 ISPDA4D126 451 aa18.88■□□□□ 0.61
LIMS2-215ENST00000484252 H3BM21 787 aa18.88■□□□□ 0.61
LIMS2-215ENST00000484252 M0R082 166 aa18.88■□□□□ 0.61
LIMS2-215ENST00000484252 FURINP09958 794 aa18.88■□□□□ 0.61
LIMS2-215ENST00000484252 C1GALT1C1LP0DN25 315 aa18.88■□□□□ 0.61
LIMS2-215ENST00000484252 EIF4HQ15056 248 aaKnown RBP18.88■□□□□ 0.61
LIMS2-215ENST00000484252 DEFB115Q30KQ5 88 aa18.88■□□□□ 0.61
LIMS2-215ENST00000484252 THOC7Q6I9Y2 204 aaKnown RBP18.88■□□□□ 0.61
LIMS2-215ENST00000484252 ZNF605Q86T29 641 aa18.88■□□□□ 0.61
LIMS2-215ENST00000484252 NLRP8Q86W28 1048 aa18.88■□□□□ 0.61
LIMS2-215ENST00000484252 SLC30A8Q8IWU4 369 aa18.88■□□□□ 0.61
LIMS2-215ENST00000484252 OR4K1Q8NGD4 311 aa18.88■□□□□ 0.61
LIMS2-215ENST00000484252 ZNF480Q8WV37 535 aa18.88■□□□□ 0.61
LIMS2-215ENST00000484252 GEMIN6Q8WXD5 167 aaKnown RBP18.88■□□□□ 0.61
LIMS2-215ENST00000484252 AP2M1Q96CW1 435 aa18.88■□□□□ 0.61
LIMS2-215ENST00000484252 VWCEQ96DN2 955 aa18.88■□□□□ 0.61
LIMS2-215ENST00000484252 COL21A1Q96P44 957 aa18.88■□□□□ 0.61
LIMS2-215ENST00000484252 ZNF556Q9HAH1 456 aa18.88■□□□□ 0.61
LIMS2-215ENST00000484252 DMRT3Q9NQL9 472 aa18.88■□□□□ 0.61
LIMS2-215ENST00000484252 TMEM184CQ9NVA4 438 aa18.88■□□□□ 0.61
LIMS2-215ENST00000484252 TAF4O00268 1085 aa18.88■□□□□ 0.61
LIMS2-215ENST00000484252 C6orf47O95873 294 aa18.88■□□□□ 0.61
LIMS2-215ENST00000484252 SLC19A1P41440 591 aa18.88■□□□□ 0.61
LIMS2-215ENST00000484252 CDH12P55289 794 aa18.88■□□□□ 0.61
LIMS2-215ENST00000484252 TBPL1P62380 186 aa18.88■□□□□ 0.61
LIMS2-215ENST00000484252 EEF1A2Q05639 463 aaKnown RBP18.88■□□□□ 0.61
LIMS2-215ENST00000484252 SLBPQ14493 270 aaKnown RBP eCLIP18.88■□□□□ 0.61
LIMS2-215ENST00000484252 SYT16Q17RD7 645 aa18.88■□□□□ 0.61
LIMS2-215ENST00000484252 CRB2Q5IJ48 1285 aa18.88■□□□□ 0.61
LIMS2-215ENST00000484252 ERAP2Q6P179 960 aa18.88■□□□□ 0.61
LIMS2-215ENST00000484252 SLC39A5Q6ZMH5 540 aa18.88■□□□□ 0.61
LIMS2-215ENST00000484252 ZNF852Q6ZMS4 543 aa18.88■□□□□ 0.61
LIMS2-215ENST00000484252 Q6ZPB1 254 aaPredicted RBP18.88■□□□□ 0.61
LIMS2-215ENST00000484252 SLC46A3Q7Z3Q1 461 aa18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms