RNA–Protein interactions for RNA: ENST00000484246.5

UPF3A-208, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3A, Length 699 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-208ENST00000484246 A0A088AWK7 358 aa15.02■□□□□ -0
UPF3A-208ENST00000484246 CCDC151A5D8V7 595 aa15.02■□□□□ -0
UPF3A-208ENST00000484246 IDSB3KWA1 339 aa15.02■□□□□ -0
UPF3A-208ENST00000484246 AGPSO00116 658 aa15.02■□□□□ -0
UPF3A-208ENST00000484246 PEX12O00623 359 aa15.02■□□□□ -0
UPF3A-208ENST00000484246 SOCS6O14544 535 aa15.02■□□□□ -0
UPF3A-208ENST00000484246 PLIN3O60664 434 aa15.02■□□□□ -0
UPF3A-208ENST00000484246 SCELO95171 688 aa15.02■□□□□ -0
UPF3A-208ENST00000484246 OTCP00480 354 aa15.02■□□□□ -0
UPF3A-208ENST00000484246 KRT4P19013 534 aa15.02■□□□□ -0
UPF3A-208ENST00000484246 ZNF10P21506 573 aaPredicted RBP15.02■□□□□ -0
UPF3A-208ENST00000484246 ARFIP1P53367 373 aa15.02■□□□□ -0
UPF3A-208ENST00000484246 SOX8P57073 446 aa15.02■□□□□ -0
UPF3A-208ENST00000484246 NAA20P61599 178 aa15.02■□□□□ -0
UPF3A-208ENST00000484246 MAT1AQ00266 395 aaKnown RBP15.02■□□□□ -0
UPF3A-208ENST00000484246 TGM3Q08188 693 aa15.02■□□□□ -0
UPF3A-208ENST00000484246 ZNF844Q08AG5 666 aa15.02■□□□□ -0
UPF3A-208ENST00000484246 KCNAB2Q13303 367 aa15.02■□□□□ -0
UPF3A-208ENST00000484246 SYT16Q17RD7 645 aa15.02■□□□□ -0
UPF3A-208ENST00000484246 ZNF678Q5SXM1 525 aa15.02■□□□□ -0
UPF3A-208ENST00000484246 IQCKQ8N0W5 287 aa15.02■□□□□ -0
UPF3A-208ENST00000484246 SRFBP1Q8NEF9 429 aaKnown RBP15.02■□□□□ -0
UPF3A-208ENST00000484246 MYRIPQ8NFW9 859 aa15.02■□□□□ -0
UPF3A-208ENST00000484246 OR52B6Q8NGF0 335 aa15.02■□□□□ -0
UPF3A-208ENST00000484246 APOPT1Q96IL0 206 aa15.02■□□□□ -0
UPF3A-208ENST00000484246 NSUN5Q96P11 429 aaKnown RBP15.02■□□□□ -0
UPF3A-208ENST00000484246 QRFPRQ96P65 431 aa15.02■□□□□ -0
UPF3A-208ENST00000484246 TMEM237Q96Q45 408 aa15.02■□□□□ -0
UPF3A-208ENST00000484246 ARHGAP9Q9BRR9 750 aa15.02■□□□□ -0
UPF3A-208ENST00000484246 NPLQ9BXD5 320 aaPredicted RBP15.02■□□□□ -0
UPF3A-208ENST00000484246 REXO4Q9GZR2 422 aaKnown RBP15.02■□□□□ -0
UPF3A-208ENST00000484246 KLHL31Q9H511 634 aa15.02■□□□□ -0
UPF3A-208ENST00000484246 NOL11Q9H8H0 719 aaKnown RBP15.02■□□□□ -0
UPF3A-208ENST00000484246 DMRT3Q9NQL9 472 aa15.02■□□□□ -0
UPF3A-208ENST00000484246 P4HTMQ9NXG6 502 aa15.02■□□□□ -0
UPF3A-208ENST00000484246 PCM1Q15154 2024 aa15.02□□□□□ -0.01
UPF3A-208ENST00000484246 FOXO6A8MYZ6 492 aa15.01□□□□□ -0.01
UPF3A-208ENST00000484246 G3V2L1 256 aa15.01□□□□□ -0.01
UPF3A-208ENST00000484246 COPEO14579 308 aa15.01□□□□□ -0.01
UPF3A-208ENST00000484246 ERI3O43414 337 aaKnown RBP15.01□□□□□ -0.01
UPF3A-208ENST00000484246 CLDN9O95484 217 aa15.01□□□□□ -0.01
UPF3A-208ENST00000484246 FAM87AP0C7U9 286 aa15.01□□□□□ -0.01
UPF3A-208ENST00000484246 IMPDH1P20839 514 aa15.01□□□□□ -0.01
UPF3A-208ENST00000484246 TSFMP43897 325 aaKnown RBP15.01□□□□□ -0.01
UPF3A-208ENST00000484246 XCR1P46094 333 aa15.01□□□□□ -0.01
UPF3A-208ENST00000484246 EMP2P54851 167 aa15.01□□□□□ -0.01
UPF3A-208ENST00000484246 RAB8AP61006 207 aa15.01□□□□□ -0.01
UPF3A-208ENST00000484246 RBBP7Q16576 425 aa15.01□□□□□ -0.01
UPF3A-208ENST00000484246 UNC50Q53HI1 259 aa15.01□□□□□ -0.01
UPF3A-208ENST00000484246 DCAF10Q5QP82 559 aa15.01□□□□□ -0.01
UPF3A-208ENST00000484246 CPZQ66K79 652 aa15.01□□□□□ -0.01
UPF3A-208ENST00000484246 TRIM40Q6P9F5 258 aa15.01□□□□□ -0.01
UPF3A-208ENST00000484246 ABHD17CQ6PCB6 329 aa15.01□□□□□ -0.01
UPF3A-208ENST00000484246 TMEM205Q6UW68 189 aa15.01□□□□□ -0.01
UPF3A-208ENST00000484246 KIRREL2Q6UWL6 708 aa15.01□□□□□ -0.01
UPF3A-208ENST00000484246 HUS1BQ8NHY5 278 aa15.01□□□□□ -0.01
UPF3A-208ENST00000484246 WDR20Q8TBZ3 569 aa15.01□□□□□ -0.01
UPF3A-208ENST00000484246 ADAMTS18Q8TE60 1221 aa15.01□□□□□ -0.01
UPF3A-208ENST00000484246 TBC1D20Q96BZ9 403 aa15.01□□□□□ -0.01
UPF3A-208ENST00000484246 CMTM7Q96FZ5 175 aa15.01□□□□□ -0.01
UPF3A-208ENST00000484246 ZNF382Q96SR6 550 aa15.01□□□□□ -0.01
UPF3A-208ENST00000484246 ING2Q9H160 280 aa15.01□□□□□ -0.01
UPF3A-208ENST00000484246 LANCL2Q9NS86 450 aa15.01□□□□□ -0.01
UPF3A-208ENST00000484246 SENP1Q9P0U3 644 aa15.01□□□□□ -0.01
UPF3A-208ENST00000484246 HCN3Q9P1Z3 774 aa15.01□□□□□ -0.01
UPF3A-208ENST00000484246 MID2Q9UJV3 735 aa15.01□□□□□ -0.01
UPF3A-208ENST00000484246 STK38LQ9Y2H1 464 aa15.01□□□□□ -0.01
UPF3A-208ENST00000484246 PCDHGA9Q9Y5G4 932 aaKnown RBP15.01□□□□□ -0.01
UPF3A-208ENST00000484246 TLDC2A0PJX2 215 aa15□□□□□ -0.01
UPF3A-208ENST00000484246 ZNF860A6NHJ4 632 aa15□□□□□ -0.01
UPF3A-208ENST00000484246 ARGFXA6NJG6 315 aa15□□□□□ -0.01
UPF3A-208ENST00000484246 FOXE1O00358 373 aaPredicted RBP15□□□□□ -0.01
UPF3A-208ENST00000484246 MLYCDO95822 493 aa15□□□□□ -0.01
UPF3A-208ENST00000484246 ACPPP15309 386 aa15□□□□□ -0.01
UPF3A-208ENST00000484246 JAK1P23458 1154 aa15□□□□□ -0.01
UPF3A-208ENST00000484246 CCNG1P51959 295 aa15□□□□□ -0.01
UPF3A-208ENST00000484246 EFNA3P52797 238 aa15□□□□□ -0.01
UPF3A-208ENST00000484246 DNAJB13P59910 316 aa15□□□□□ -0.01
UPF3A-208ENST00000484246 PHEXP78562 749 aa15□□□□□ -0.01
UPF3A-208ENST00000484246 CLCQ05315 142 aa15□□□□□ -0.01
UPF3A-208ENST00000484246 TUBB8Q3ZCM7 444 aa15□□□□□ -0.01
UPF3A-208ENST00000484246 SHISA6Q6ZSJ9 500 aa15□□□□□ -0.01
UPF3A-208ENST00000484246 CROCCP2Q86T23 111 aa15□□□□□ -0.01
UPF3A-208ENST00000484246 LAPTM4BQ86VI4 370 aa15□□□□□ -0.01
UPF3A-208ENST00000484246 C4orf33Q8N1A6 199 aa15□□□□□ -0.01
UPF3A-208ENST00000484246 BANPQ8N9N5 519 aa15□□□□□ -0.01
UPF3A-208ENST00000484246 OR11G2Q8NGC1 345 aa15□□□□□ -0.01
UPF3A-208ENST00000484246 OR5T3Q8NGG3 340 aa15□□□□□ -0.01
UPF3A-208ENST00000484246 CCT6BQ92526 530 aa15□□□□□ -0.01
UPF3A-208ENST00000484246 KCNC2Q96PR1 638 aa15□□□□□ -0.01
UPF3A-208ENST00000484246 SERINC2Q96SA4 455 aa15□□□□□ -0.01
UPF3A-208ENST00000484246 TRIM55Q9BYV6 548 aa15□□□□□ -0.01
UPF3A-208ENST00000484246 ROGDIQ9GZN7 287 aa15□□□□□ -0.01
UPF3A-208ENST00000484246 VN1R1Q9GZP7 353 aa15□□□□□ -0.01
UPF3A-208ENST00000484246 MLXIPLQ9NP71 852 aa15□□□□□ -0.01
UPF3A-208ENST00000484246 TRPS1Q9UHF7 1281 aa15□□□□□ -0.01
UPF3A-208ENST00000484246 FBXL4Q9UKA2 621 aa15□□□□□ -0.01
UPF3A-208ENST00000484246 RNF11Q9Y3C5 154 aa15□□□□□ -0.01
UPF3A-208ENST00000484246 PCSK5Q92824 1860 aa14.99□□□□□ -0.01
UPF3A-208ENST00000484246 MKRN2OSH3BPM6 223 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms