RNA–Protein interactions for RNA: ENST00000483922.1

UBR4-213, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 543 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-213ENST00000483922 SARGQ9BW04 601 aa12.01□□□□□ -0.49
UBR4-213ENST00000483922 SGPP1Q9BX95 441 aa12.01□□□□□ -0.49
UBR4-213ENST00000483922 FRMD8P1Q9BZ68 369 aaPredicted RBP12.01□□□□□ -0.49
UBR4-213ENST00000483922 KLHL31Q9H511 634 aa12.01□□□□□ -0.49
UBR4-213ENST00000483922 DNAJB12Q9NXW2 375 aaKnown RBP12.01□□□□□ -0.49
UBR4-213ENST00000483922 ZFATQ9P243 1243 aa12.01□□□□□ -0.49
UBR4-213ENST00000483922 Q9UFV3 132 aa12.01□□□□□ -0.49
UBR4-213ENST00000483922 ST6GALNAC2Q9UJ37 374 aa12.01□□□□□ -0.49
UBR4-213ENST00000483922 DRG1Q9Y295 367 aaKnown RBP12.01□□□□□ -0.49
UBR4-213ENST00000483922 ZNF407Q9C0G0 2248 aa12.01□□□□□ -0.49
UBR4-213ENST00000483922 PHF3Q92576 2039 aaKnown RBP12□□□□□ -0.49
UBR4-213ENST00000483922 ZCWPW2A0A1B0GU75 182 aa12□□□□□ -0.49
UBR4-213ENST00000483922 NPIPA2E9PIF3 369 aa12□□□□□ -0.49
UBR4-213ENST00000483922 NPIPA3F8WFD2 350 aa12□□□□□ -0.49
UBR4-213ENST00000483922 SLC16A5O15375 505 aa12□□□□□ -0.49
UBR4-213ENST00000483922 HAUS5O94927 633 aa12□□□□□ -0.49
UBR4-213ENST00000483922 GLI4P10075 376 aa12□□□□□ -0.49
UBR4-213ENST00000483922 ALOX12P18054 663 aa12□□□□□ -0.49
UBR4-213ENST00000483922 PPP2R1BP30154 601 aa12□□□□□ -0.49
UBR4-213ENST00000483922 KCNJ1P48048 391 aa12□□□□□ -0.49
UBR4-213ENST00000483922 TERF1P54274 439 aa12□□□□□ -0.49
UBR4-213ENST00000483922 ADAM8P78325 824 aa12□□□□□ -0.49
UBR4-213ENST00000483922 MYBPHQ13203 477 aa12□□□□□ -0.49
UBR4-213ENST00000483922 NAE1Q13564 534 aa12□□□□□ -0.49
UBR4-213ENST00000483922 PHKG1Q16816 387 aa12□□□□□ -0.49
UBR4-213ENST00000483922 CATSPEREQ5SY80 951 aa12□□□□□ -0.49
UBR4-213ENST00000483922 ARHGAP11AQ6P4F7 1023 aa12□□□□□ -0.49
UBR4-213ENST00000483922 QSOX2Q6ZRP7 698 aa12□□□□□ -0.49
UBR4-213ENST00000483922 CCDC89Q8N998 374 aa12□□□□□ -0.49
UBR4-213ENST00000483922 SERBP1Q8NC51 408 aaKnown RBP eCLIP12□□□□□ -0.49
UBR4-213ENST00000483922 ABHD11Q8NFV4 315 aa12□□□□□ -0.49
UBR4-213ENST00000483922 UTP15Q8TED0 518 aaKnown RBP12□□□□□ -0.49
UBR4-213ENST00000483922 EEF1AKMT1Q8WVE0 214 aa12□□□□□ -0.49
UBR4-213ENST00000483922 NINJ1Q92982 152 aa12□□□□□ -0.49
UBR4-213ENST00000483922 TMEM125Q96AQ2 219 aa12□□□□□ -0.49
UBR4-213ENST00000483922 ALKBH8Q96BT7 664 aaKnown RBP12□□□□□ -0.49
UBR4-213ENST00000483922 PYCR2Q96C36 320 aa12□□□□□ -0.49
UBR4-213ENST00000483922 TTYH2Q9BSA4 534 aa12□□□□□ -0.49
UBR4-213ENST00000483922 DEFB126Q9BYW3 111 aa12□□□□□ -0.49
UBR4-213ENST00000483922 INTS10Q9NVR2 710 aaKnown RBP12□□□□□ -0.49
UBR4-213ENST00000483922 KCMF1Q9P0J7 381 aa12□□□□□ -0.49
UBR4-213ENST00000483922 NSD1Q96L73 2696 aaPredicted RBP12□□□□□ -0.49
UBR4-213ENST00000483922 USP27XA6NNY8 438 aa11.99□□□□□ -0.49
UBR4-213ENST00000483922 FAM166BA8MTA8 275 aa11.99□□□□□ -0.49
UBR4-213ENST00000483922 NDUFS4O43181 175 aa11.99□□□□□ -0.49
UBR4-213ENST00000483922 CEP104O60308 925 aa11.99□□□□□ -0.49
UBR4-213ENST00000483922 ZNF354AO60765 605 aaPredicted RBP11.99□□□□□ -0.49
UBR4-213ENST00000483922 ITGA10O75578 1167 aa11.99□□□□□ -0.49
UBR4-213ENST00000483922 GLSO94925 669 aaPredicted RBP11.99□□□□□ -0.49
UBR4-213ENST00000483922 ZWINTO95229 277 aa11.99□□□□□ -0.49
UBR4-213ENST00000483922 CELA3AP09093 270 aa11.99□□□□□ -0.49
UBR4-213ENST00000483922 ZNF888P0CJ79 500 aaPredicted RBP11.99□□□□□ -0.49
UBR4-213ENST00000483922 PGGT1BP53609 377 aa11.99□□□□□ -0.49
UBR4-213ENST00000483922 PPIAP62937 165 aaKnown RBP11.99□□□□□ -0.49
UBR4-213ENST00000483922 BASP1P80723 227 aaKnown RBP11.99□□□□□ -0.49
UBR4-213ENST00000483922 FOLH1Q04609 750 aa11.99□□□□□ -0.49
UBR4-213ENST00000483922 HERC3Q15034 1050 aa11.99□□□□□ -0.49
UBR4-213ENST00000483922 CCNG2Q16589 344 aa11.99□□□□□ -0.49
UBR4-213ENST00000483922 MEI1Q5TIA1 1274 aa11.99□□□□□ -0.49
UBR4-213ENST00000483922 ANKRD22Q5VYY1 191 aa11.99□□□□□ -0.49
UBR4-213ENST00000483922 LCTLQ6UWM7 567 aa11.99□□□□□ -0.49
UBR4-213ENST00000483922 C17orf64Q86WR6 236 aa11.99□□□□□ -0.49
UBR4-213ENST00000483922 ZZZ3Q8IYH5 903 aa11.99□□□□□ -0.49
UBR4-213ENST00000483922 SYCE1Q8N0S2 351 aa11.99□□□□□ -0.49
UBR4-213ENST00000483922 CYP4Z2PQ8N1L4 340 aa11.99□□□□□ -0.49
UBR4-213ENST00000483922 TMEM52Q8NDY8 209 aa11.99□□□□□ -0.49
UBR4-213ENST00000483922 KCNJ9Q92806 393 aa11.99□□□□□ -0.49
UBR4-213ENST00000483922 GPATCH1Q9BRR8 931 aaKnown RBP11.99□□□□□ -0.49
UBR4-213ENST00000483922 DESI2Q9BSY9 194 aa11.99□□□□□ -0.49
UBR4-213ENST00000483922 TRIM5Q9C035 493 aa11.99□□□□□ -0.49
UBR4-213ENST00000483922 TSPY26PQ9H489 355 aa11.99□□□□□ -0.49
UBR4-213ENST00000483922 ZDHHC11Q9H8X9 412 aa11.99□□□□□ -0.49
UBR4-213ENST00000483922 PLEKHA6Q9Y2H5 1048 aa11.99□□□□□ -0.49
UBR4-213ENST00000483922 ABCA4P78363 2273 aa11.98□□□□□ -0.49
UBR4-213ENST00000483922 TRBV11-1A0A0K0K1C0 115 aa11.98□□□□□ -0.49
UBR4-213ENST00000483922 FAM237BA0A1B0GVD1 139 aa11.98□□□□□ -0.49
UBR4-213ENST00000483922 G3V3Y1 287 aa11.98□□□□□ -0.49
UBR4-213ENST00000483922 OR1F1O43749 312 aa11.98□□□□□ -0.49
UBR4-213ENST00000483922 FAM155BO75949 473 aa11.98□□□□□ -0.49
UBR4-213ENST00000483922 SLC35G6P0C7Q6 338 aa11.98□□□□□ -0.49
UBR4-213ENST00000483922 ENO3P13929 434 aaPredicted RBP11.98□□□□□ -0.49
UBR4-213ENST00000483922 TPSB2P20231 275 aa11.98□□□□□ -0.49
UBR4-213ENST00000483922 HNF4AP41235 474 aa11.98□□□□□ -0.49
UBR4-213ENST00000483922 SLC1A2P43004 574 aa11.98□□□□□ -0.49
UBR4-213ENST00000483922 HNRNPFP52597 415 aaKnown RBP11.98□□□□□ -0.49
UBR4-213ENST00000483922 RAB8AP61006 207 aa11.98□□□□□ -0.49
UBR4-213ENST00000483922 PWP1Q13610 501 aa11.98□□□□□ -0.49
UBR4-213ENST00000483922 TPSAB1Q15661 275 aa11.98□□□□□ -0.49
UBR4-213ENST00000483922 ZNF750Q32MQ0 723 aa11.98□□□□□ -0.49
UBR4-213ENST00000483922 TTLL9Q3SXZ7 439 aa11.98□□□□□ -0.49
UBR4-213ENST00000483922 ZNF470Q6ECI4 717 aa11.98□□□□□ -0.49
UBR4-213ENST00000483922 DRICH1Q6PGQ1 229 aaPredicted RBP11.98□□□□□ -0.49
UBR4-213ENST00000483922 ARSKQ6UWY0 536 aa11.98□□□□□ -0.49
UBR4-213ENST00000483922 ACAD11Q709F0 780 aa11.98□□□□□ -0.49
UBR4-213ENST00000483922 Q71RC1 249 aaPredicted RBP11.98□□□□□ -0.49
UBR4-213ENST00000483922 ANKRD53Q8N9V6 530 aa11.98□□□□□ -0.49
UBR4-213ENST00000483922 B3GNT7Q8NFL0 401 aa11.98□□□□□ -0.49
UBR4-213ENST00000483922 OR2M7Q8NG81 312 aa11.98□□□□□ -0.49
UBR4-213ENST00000483922 NT5CQ8TCD5 201 aa11.98□□□□□ -0.49
UBR4-213ENST00000483922 SREK1Q8WXA9 508 aaKnown RBP11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms