RNA–Protein interactions for RNA: ENST00000481641.1

CLK1-211, Transcript of CDC like kinase 1, humanhuman

TSL 4

Gene CLK1, Length 690 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-211ENST00000481641 A0A0G2JN53 185 aa17.41■□□□□ 0.38
CLK1-211ENST00000481641 GABRR3A8MPY1 467 aa17.41■□□□□ 0.38
CLK1-211ENST00000481641 A8MUA0 341 aa17.41■□□□□ 0.38
CLK1-211ENST00000481641 PRMT3O60678 531 aa17.41■□□□□ 0.38
CLK1-211ENST00000481641 MYBL2P10244 700 aa17.41■□□□□ 0.38
CLK1-211ENST00000481641 JAK1P23458 1154 aa17.41■□□□□ 0.38
CLK1-211ENST00000481641 CDKL1Q00532 357 aa17.41■□□□□ 0.38
CLK1-211ENST00000481641 ZNF468Q5VIY5 522 aaPredicted RBP17.41■□□□□ 0.38
CLK1-211ENST00000481641 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP17.41■□□□□ 0.38
CLK1-211ENST00000481641 CA13Q8N1Q1 262 aa17.41■□□□□ 0.38
CLK1-211ENST00000481641 ANKRD7Q92527 254 aa17.41■□□□□ 0.38
CLK1-211ENST00000481641 RELTQ969Z4 430 aa17.41■□□□□ 0.38
CLK1-211ENST00000481641 RHBDF1Q96CC6 855 aa17.41■□□□□ 0.38
CLK1-211ENST00000481641 TSPAN10Q9H1Z9 355 aaPredicted RBP17.41■□□□□ 0.38
CLK1-211ENST00000481641 SAYSD1Q9NPB0 183 aa17.41■□□□□ 0.38
CLK1-211ENST00000481641 NECTIN3Q9NQS3 549 aa17.41■□□□□ 0.38
CLK1-211ENST00000481641 SH3BGRL2Q9UJC5 107 aa17.41■□□□□ 0.38
CLK1-211ENST00000481641 NDC80O14777 642 aa17.4■□□□□ 0.38
CLK1-211ENST00000481641 PHGDHO43175 533 aaKnown RBP17.4■□□□□ 0.38
CLK1-211ENST00000481641 WISP3O95389 354 aaPredicted RBP17.4■□□□□ 0.38
CLK1-211ENST00000481641 SERPINA6P08185 405 aa17.4■□□□□ 0.38
CLK1-211ENST00000481641 C1GALT1C1LP0DN25 315 aa17.4■□□□□ 0.38
CLK1-211ENST00000481641 GMPRP36959 345 aa17.4■□□□□ 0.38
CLK1-211ENST00000481641 SLC6A12P48065 614 aa17.4■□□□□ 0.38
CLK1-211ENST00000481641 SKP1P63208 163 aa17.4■□□□□ 0.38
CLK1-211ENST00000481641 BTN3A2P78410 334 aa17.4■□□□□ 0.38
CLK1-211ENST00000481641 OC90Q02509 493 aaPredicted RBP17.4■□□□□ 0.38
CLK1-211ENST00000481641 SLCO4C1Q6ZQN7 724 aa17.4■□□□□ 0.38
CLK1-211ENST00000481641 ADAMTSL2Q86TH1 951 aa17.4■□□□□ 0.38
CLK1-211ENST00000481641 SLC5A8Q8N695 610 aa17.4■□□□□ 0.38
CLK1-211ENST00000481641 ELP5Q8TE02 316 aa17.4■□□□□ 0.38
CLK1-211ENST00000481641 PYROXD1Q8WU10 500 aa17.4■□□□□ 0.38
CLK1-211ENST00000481641 ESAMQ96AP7 390 aa17.4■□□□□ 0.38
CLK1-211ENST00000481641 NSMCE4AQ9NXX6 385 aa17.4■□□□□ 0.38
CLK1-211ENST00000481641 URADA6NGE7 173 aa17.39■□□□□ 0.37
CLK1-211ENST00000481641 TAPBPO15533 448 aa17.39■□□□□ 0.37
CLK1-211ENST00000481641 RAD51CO43502 376 aa17.39■□□□□ 0.37
CLK1-211ENST00000481641 RNH1P13489 461 aaKnown RBP17.39■□□□□ 0.37
CLK1-211ENST00000481641 HNRNPH1P31943 449 aaKnown RBP17.39■□□□□ 0.37
CLK1-211ENST00000481641 HNMTP50135 292 aa17.39■□□□□ 0.37
CLK1-211ENST00000481641 SLC12A2P55011 1212 aa17.39■□□□□ 0.37
CLK1-211ENST00000481641 TAS2R50P59544 299 aa17.39■□□□□ 0.37
CLK1-211ENST00000481641 C2orf54Q08AI8 447 aa17.39■□□□□ 0.37
CLK1-211ENST00000481641 CBLBQ13191 982 aa17.39■□□□□ 0.37
CLK1-211ENST00000481641 RUNX2Q13950 521 aa17.39■□□□□ 0.37
CLK1-211ENST00000481641 SLBPQ14493 270 aaKnown RBP eCLIP17.39■□□□□ 0.37
CLK1-211ENST00000481641 TGFBIQ15582 683 aa17.39■□□□□ 0.37
CLK1-211ENST00000481641 NIPAL1Q6NVV3 410 aa17.39■□□□□ 0.37
CLK1-211ENST00000481641 QSOX2Q6ZRP7 698 aa17.39■□□□□ 0.37
CLK1-211ENST00000481641 RPS19BP1Q86WX3 136 aaKnown RBP17.39■□□□□ 0.37
CLK1-211ENST00000481641 CCT6BQ92526 530 aa17.39■□□□□ 0.37
CLK1-211ENST00000481641 SCMH1Q96GD3 660 aa17.39■□□□□ 0.37
CLK1-211ENST00000481641 PDLIM2Q96JY6 352 aa17.39■□□□□ 0.37
CLK1-211ENST00000481641 ERP44Q9BS26 406 aa17.39■□□□□ 0.37
CLK1-211ENST00000481641 TMEM79Q9BSE2 394 aa17.39■□□□□ 0.37
CLK1-211ENST00000481641 DERL2Q9GZP9 239 aa17.39■□□□□ 0.37
CLK1-211ENST00000481641 POPDC3Q9HBV1 291 aa17.39■□□□□ 0.37
CLK1-211ENST00000481641 RNF14Q9UBS8 474 aa17.39■□□□□ 0.37
CLK1-211ENST00000481641 IGKV3D-11A0A0A0MRZ8 115 aa17.38■□□□□ 0.37
CLK1-211ENST00000481641 TCRBV16S1A1N1A0A5B0 115 aa17.38■□□□□ 0.37
CLK1-211ENST00000481641 PSMD12O00232 456 aaPredicted RBP17.38■□□□□ 0.37
CLK1-211ENST00000481641 CCL21O00585 134 aa17.38■□□□□ 0.37
CLK1-211ENST00000481641 PRAMEF4O60810 478 aa17.38■□□□□ 0.37
CLK1-211ENST00000481641 H2AFYO75367 372 aaKnown RBP17.38■□□□□ 0.37
CLK1-211ENST00000481641 NEURL1O76050 574 aa17.38■□□□□ 0.37
CLK1-211ENST00000481641 CCDC166P0CW27 439 aa17.38■□□□□ 0.37
CLK1-211ENST00000481641 GNAZP19086 355 aa17.38■□□□□ 0.37
CLK1-211ENST00000481641 TPP2P29144 1249 aaPredicted RBP17.38■□□□□ 0.37
CLK1-211ENST00000481641 POU4F1Q01851 419 aa17.38■□□□□ 0.37
CLK1-211ENST00000481641 OR4D1Q15615 310 aa17.38■□□□□ 0.37
CLK1-211ENST00000481641 PRAMEF9Q5VWM5 478 aa17.38■□□□□ 0.37
CLK1-211ENST00000481641 ADNP2Q6IQ32 1131 aa17.38■□□□□ 0.37
CLK1-211ENST00000481641 GALNTL5Q7Z4T8 443 aa17.38■□□□□ 0.37
CLK1-211ENST00000481641 KLHDC8AQ8IYD2 350 aa17.38■□□□□ 0.37
CLK1-211ENST00000481641 BBOF1Q8ND07 529 aa17.38■□□□□ 0.37
CLK1-211ENST00000481641 NFAM1Q8NET5 270 aaPredicted RBP17.38■□□□□ 0.37
CLK1-211ENST00000481641 PRDM9Q9NQV7 894 aa17.38■□□□□ 0.37
CLK1-211ENST00000481641 GRHL1Q9NZI5 618 aa17.38■□□□□ 0.37
CLK1-211ENST00000481641 LRFN1Q9P244 771 aa17.38■□□□□ 0.37
CLK1-211ENST00000481641 COPG2Q9UBF2 871 aa17.38■□□□□ 0.37
CLK1-211ENST00000481641 PCNX1Q96RV3 2341 aa17.38■□□□□ 0.37
CLK1-211ENST00000481641 CREBBPQ92793 2442 aa17.38■□□□□ 0.37
CLK1-211ENST00000481641 ARHGAP10A1A4S6 786 aa17.37■□□□□ 0.37
CLK1-211ENST00000481641 FAM187AA6NFU0 413 aa17.37■□□□□ 0.37
CLK1-211ENST00000481641 SAGE2PA6NJ88 616 aa17.37■□□□□ 0.37
CLK1-211ENST00000481641 ZNHIT1O43257 154 aa17.37■□□□□ 0.37
CLK1-211ENST00000481641 SP1P08047 785 aa17.37■□□□□ 0.37
CLK1-211ENST00000481641 CD46P15529 392 aa17.37■□□□□ 0.37
CLK1-211ENST00000481641 EEF1DP29692 281 aaKnown RBP17.37■□□□□ 0.37
CLK1-211ENST00000481641 HSPA7P48741 367 aa17.37■□□□□ 0.37
CLK1-211ENST00000481641 HNRNPFP52597 415 aaKnown RBP17.37■□□□□ 0.37
CLK1-211ENST00000481641 GPX6P59796 221 aa17.37■□□□□ 0.37
CLK1-211ENST00000481641 CALCOCO2Q13137 446 aa17.37■□□□□ 0.37
CLK1-211ENST00000481641 SP5Q6BEB4 398 aaPredicted RBP17.37■□□□□ 0.37
CLK1-211ENST00000481641 SLC25A25Q6KCM7 469 aa17.37■□□□□ 0.37
CLK1-211ENST00000481641 TMIGD1Q6UXZ0 262 aa17.37■□□□□ 0.37
CLK1-211ENST00000481641 VN1R5Q7Z5H4 357 aa17.37■□□□□ 0.37
CLK1-211ENST00000481641 PNPLA5Q7Z6Z6 429 aaPredicted RBP17.37■□□□□ 0.37
CLK1-211ENST00000481641 TMEM52Q8NDY8 209 aa17.37■□□□□ 0.37
CLK1-211ENST00000481641 SPATA4Q8NEY3 305 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms