RNA–Protein interactions for RNA: ENST00000481508.1

SSBP1-210, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP1, Length 989 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-210ENST00000481508 PRMT9Q6P2P2 845 aa10.02□□□□□ -0.81
SSBP1-210ENST00000481508 TMIGD1Q6UXZ0 262 aa10.02□□□□□ -0.81
SSBP1-210ENST00000481508 PPP1R32Q7Z5V6 425 aa10.02□□□□□ -0.81
SSBP1-210ENST00000481508 SYVN1Q86TM6 617 aa10.02□□□□□ -0.81
SSBP1-210ENST00000481508 ZC3H7AQ8IWR0 971 aaKnown RBP10.02□□□□□ -0.81
SSBP1-210ENST00000481508 IQCKQ8N0W5 287 aa10.02□□□□□ -0.81
SSBP1-210ENST00000481508 RIBC1Q8N443 379 aaPredicted RBP10.02□□□□□ -0.81
SSBP1-210ENST00000481508 BANPQ8N9N5 519 aa10.02□□□□□ -0.81
SSBP1-210ENST00000481508 SMIM10Q96HG1 83 aa10.02□□□□□ -0.81
SSBP1-210ENST00000481508 EFHD1Q9BUP0 239 aa10.02□□□□□ -0.81
SSBP1-210ENST00000481508 EFCAB11Q9BUY7 163 aa10.02□□□□□ -0.81
SSBP1-210ENST00000481508 RBCK1Q9BYM8 510 aa10.02□□□□□ -0.81
SSBP1-210ENST00000481508 SLC26A1Q9H2B4 701 aa10.02□□□□□ -0.81
SSBP1-210ENST00000481508 NT5DC2Q9H857 520 aa10.02□□□□□ -0.81
SSBP1-210ENST00000481508 IPPKQ9H8X2 491 aa10.02□□□□□ -0.81
SSBP1-210ENST00000481508 SEMA4BQ9NPR2 832 aaPredicted RBP10.02□□□□□ -0.81
SSBP1-210ENST00000481508 SLC17A7Q9P2U7 560 aa10.02□□□□□ -0.81
SSBP1-210ENST00000481508 GPN3Q9UHW5 284 aaPredicted RBP10.02□□□□□ -0.81
SSBP1-210ENST00000481508 ZNF225Q9UK10 706 aa10.02□□□□□ -0.81
SSBP1-210ENST00000481508 RNF11Q9Y3C5 154 aa10.02□□□□□ -0.81
SSBP1-210ENST00000481508 NAALAD2Q9Y3Q0 740 aa10.02□□□□□ -0.81
SSBP1-210ENST00000481508 IGLV3-12A0A075B6K2 115 aa10.01□□□□□ -0.81
SSBP1-210ENST00000481508 TXNDC9O14530 226 aa10.01□□□□□ -0.81
SSBP1-210ENST00000481508 GALR3O60755 368 aaPredicted RBP10.01□□□□□ -0.81
SSBP1-210ENST00000481508 ALOX12BO75342 701 aa10.01□□□□□ -0.81
SSBP1-210ENST00000481508 H2AFYO75367 372 aaKnown RBP10.01□□□□□ -0.81
SSBP1-210ENST00000481508 NSA2O95478 260 aaKnown RBP10.01□□□□□ -0.81
SSBP1-210ENST00000481508 SLC35G6P0C7Q6 338 aa10.01□□□□□ -0.81
SSBP1-210ENST00000481508 PCNAP12004 261 aa10.01□□□□□ -0.81
SSBP1-210ENST00000481508 GP1BBP13224 206 aa10.01□□□□□ -0.81
SSBP1-210ENST00000481508 ATP5F1P24539 256 aaPredicted RBP10.01□□□□□ -0.81
SSBP1-210ENST00000481508 OTX2P32243 289 aa10.01□□□□□ -0.81
SSBP1-210ENST00000481508 CRHR1P34998 444 aa10.01□□□□□ -0.81
SSBP1-210ENST00000481508 FOLR3P41439 243 aa10.01□□□□□ -0.81
SSBP1-210ENST00000481508 PRKAA2P54646 552 aa10.01□□□□□ -0.81
SSBP1-210ENST00000481508 KLC1Q07866 573 aa10.01□□□□□ -0.81
SSBP1-210ENST00000481508 PWP1Q13610 501 aa10.01□□□□□ -0.81
SSBP1-210ENST00000481508 ATP1A4Q13733 1029 aa10.01□□□□□ -0.81
SSBP1-210ENST00000481508 NDUFA9Q16795 377 aa10.01□□□□□ -0.81
SSBP1-210ENST00000481508 KRT71Q3SY84 523 aa10.01□□□□□ -0.81
SSBP1-210ENST00000481508 DEFB134Q4QY38 66 aa10.01□□□□□ -0.81
SSBP1-210ENST00000481508 ZNF678Q5SXM1 525 aa10.01□□□□□ -0.81
SSBP1-210ENST00000481508 ZYG11AQ6WRX3 759 aa10.01□□□□□ -0.81
SSBP1-210ENST00000481508 UBE3DQ7Z6J8 389 aa10.01□□□□□ -0.81
SSBP1-210ENST00000481508 LCA5Q86VQ0 697 aa10.01□□□□□ -0.81
SSBP1-210ENST00000481508 MYLK4Q86YV6 388 aaPredicted RBP10.01□□□□□ -0.81
SSBP1-210ENST00000481508 SRRM1Q8IYB3 904 aaKnown RBP10.01□□□□□ -0.81
SSBP1-210ENST00000481508 LAS2Q8IYD9 372 aa10.01□□□□□ -0.81
SSBP1-210ENST00000481508 KRT78Q8N1N4 520 aa10.01□□□□□ -0.81
SSBP1-210ENST00000481508 EXD3Q8N9H8 876 aa10.01□□□□□ -0.81
SSBP1-210ENST00000481508 OR2Y1Q8NGV0 311 aa10.01□□□□□ -0.81
SSBP1-210ENST00000481508 STT3BQ8TCJ2 826 aa10.01□□□□□ -0.81
SSBP1-210ENST00000481508 ZNF473Q8WTR7 871 aaKnown RBP10.01□□□□□ -0.81
SSBP1-210ENST00000481508 CCT6BQ92526 530 aa10.01□□□□□ -0.81
SSBP1-210ENST00000481508 MS4A6EQ96DS6 147 aa10.01□□□□□ -0.81
SSBP1-210ENST00000481508 MVB12AQ96EY5 273 aa10.01□□□□□ -0.81
SSBP1-210ENST00000481508 QRFPRQ96P65 431 aa10.01□□□□□ -0.81
SSBP1-210ENST00000481508 F2RL3Q96RI0 385 aa10.01□□□□□ -0.81
SSBP1-210ENST00000481508 C1QTNF3Q9BXJ4 246 aa10.01□□□□□ -0.81
SSBP1-210ENST00000481508 CAPS2Q9BXY5 557 aa10.01□□□□□ -0.81
SSBP1-210ENST00000481508 TRIM55Q9BYV6 548 aa10.01□□□□□ -0.81
SSBP1-210ENST00000481508 ROPN1BQ9BZX4 212 aaPredicted RBP10.01□□□□□ -0.81
SSBP1-210ENST00000481508 RHBGQ9H310 441 aa10.01□□□□□ -0.81
SSBP1-210ENST00000481508 ROPN1Q9HAT0 212 aaPredicted RBP10.01□□□□□ -0.81
SSBP1-210ENST00000481508 MKS1Q9NXB0 559 aa10.01□□□□□ -0.81
SSBP1-210ENST00000481508 TRPC4Q9UBN4 977 aa10.01□□□□□ -0.81
SSBP1-210ENST00000481508 DCDC2Q9UHG0 476 aa10.01□□□□□ -0.81
SSBP1-210ENST00000481508 TMCO1Q9UM00 188 aa10.01□□□□□ -0.81
SSBP1-210ENST00000481508 ANGPTL3Q9Y5C1 460 aa10.01□□□□□ -0.81
SSBP1-210ENST00000481508 TNPO3Q9Y5L0 923 aaKnown RBP10.01□□□□□ -0.81
SSBP1-210ENST00000481508 SLC22A7Q9Y694 548 aa10.01□□□□□ -0.81
SSBP1-210ENST00000481508 SETD2Q9BYW2 2564 aaPredicted RBP10.01□□□□□ -0.81
SSBP1-210ENST00000481508 CCDC151A5D8V7 595 aa10□□□□□ -0.81
SSBP1-210ENST00000481508 SAP18O00422 153 aaKnown RBP10□□□□□ -0.81
SSBP1-210ENST00000481508 COPEO14579 308 aa10□□□□□ -0.81
SSBP1-210ENST00000481508 CTIFO43310 598 aaKnown RBP10□□□□□ -0.81
SSBP1-210ENST00000481508 CLEC3AO75596 197 aa10□□□□□ -0.81
SSBP1-210ENST00000481508 DNAJB5O75953 348 aa10□□□□□ -0.81
SSBP1-210ENST00000481508 ETHE1O95571 254 aa10□□□□□ -0.81
SSBP1-210ENST00000481508 ALBP02768 609 aa10□□□□□ -0.81
SSBP1-210ENST00000481508 SERPINA6P08185 405 aa10□□□□□ -0.81
SSBP1-210ENST00000481508 ZGLP1P0C6A0 271 aa10□□□□□ -0.81
SSBP1-210ENST00000481508 ALOX12P18054 663 aa10□□□□□ -0.81
SSBP1-210ENST00000481508 NEK2P51955 445 aa10□□□□□ -0.81
SSBP1-210ENST00000481508 HERVK_113P63132 956 aa10□□□□□ -0.81
SSBP1-210ENST00000481508 RGS1Q08116 209 aa10□□□□□ -0.81
SSBP1-210ENST00000481508 DDX39BQ13838 428 aaKnown RBP10□□□□□ -0.81
SSBP1-210ENST00000481508 PCLAFQ15004 111 aa10□□□□□ -0.81
SSBP1-210ENST00000481508 CPSF6Q16630 551 aaKnown RBP eCLIP10□□□□□ -0.81
SSBP1-210ENST00000481508 ADPRMQ3LIE5 342 aa10□□□□□ -0.81
SSBP1-210ENST00000481508 CRTC2Q53ET0 693 aaPredicted RBP10□□□□□ -0.81
SSBP1-210ENST00000481508 TNFAIP8L3Q5GJ75 292 aa10□□□□□ -0.81
SSBP1-210ENST00000481508 TCHHL1Q5QJ38 904 aaPredicted RBP10□□□□□ -0.81
SSBP1-210ENST00000481508 CEP85LQ5SZL2 805 aa10□□□□□ -0.81
SSBP1-210ENST00000481508 LETMD1Q6P1Q0 360 aa10□□□□□ -0.81
SSBP1-210ENST00000481508 MED27Q6P2C8 311 aa10□□□□□ -0.81
SSBP1-210ENST00000481508 ZNF793Q6ZN11 406 aa10□□□□□ -0.81
SSBP1-210ENST00000481508 MRGPREQ86SM8 312 aa10□□□□□ -0.81
SSBP1-210ENST00000481508 TBC1D19Q8N5T2 526 aa10□□□□□ -0.81
SSBP1-210ENST00000481508 L3MBTL4Q8NA19 623 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms