RNA–Protein interactions for RNA: ENST00000481116.5

ABCF3-215, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 4

Gene ABCF3, Length 568 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-215ENST00000481116 PRRC2CQ9Y520 2896 aaKnown RBP12.12□□□□□ -0.47
ABCF3-215ENST00000481116 URADA6NGE7 173 aa12.12□□□□□ -0.47
ABCF3-215ENST00000481116 ANKDD1BA6NHY2 528 aa12.12□□□□□ -0.47
ABCF3-215ENST00000481116 SH3BGRLO75368 114 aa12.12□□□□□ -0.47
ABCF3-215ENST00000481116 KLHL2O95198 593 aa12.12□□□□□ -0.47
ABCF3-215ENST00000481116 SERPINA7P05543 415 aa12.12□□□□□ -0.47
ABCF3-215ENST00000481116 FHP07954 510 aa12.12□□□□□ -0.47
ABCF3-215ENST00000481116 INHBAP08476 426 aa12.12□□□□□ -0.47
ABCF3-215ENST00000481116 FAM153BP0C7A2 387 aa12.12□□□□□ -0.47
ABCF3-215ENST00000481116 GNLYP22749 145 aa12.12□□□□□ -0.47
ABCF3-215ENST00000481116 SERPINB8P50452 374 aa12.12□□□□□ -0.47
ABCF3-215ENST00000481116 BTN3A2P78410 334 aa12.12□□□□□ -0.47
ABCF3-215ENST00000481116 BTG2P78543 158 aa12.12□□□□□ -0.47
ABCF3-215ENST00000481116 CHIT1Q13231 466 aa12.12□□□□□ -0.47
ABCF3-215ENST00000481116 RUNX2Q13950 521 aa12.12□□□□□ -0.47
ABCF3-215ENST00000481116 ABRAXAS2Q15018 415 aa12.12□□□□□ -0.47
ABCF3-215ENST00000481116 FAM83EQ2M2I3 478 aa12.12□□□□□ -0.47
ABCF3-215ENST00000481116 FAM153CQ494X1 144 aa12.12□□□□□ -0.47
ABCF3-215ENST00000481116 SFT2D3Q587I9 215 aa12.12□□□□□ -0.47
ABCF3-215ENST00000481116 IGFL2Q6UWQ7 119 aa12.12□□□□□ -0.47
ABCF3-215ENST00000481116 ISLR2Q6UXK2 745 aa12.12□□□□□ -0.47
ABCF3-215ENST00000481116 Q6ZS92 163 aa12.12□□□□□ -0.47
ABCF3-215ENST00000481116 CA13Q8N1Q1 262 aa12.12□□□□□ -0.47
ABCF3-215ENST00000481116 EFCAB3Q8N7B9 438 aa12.12□□□□□ -0.47
ABCF3-215ENST00000481116 PLPP5Q8NEB5 264 aa12.12□□□□□ -0.47
ABCF3-215ENST00000481116 DNAJB14Q8TBM8 379 aa12.12□□□□□ -0.47
ABCF3-215ENST00000481116 DCAKDQ8WVC6 231 aa12.12□□□□□ -0.47
ABCF3-215ENST00000481116 TM9SF4Q92544 642 aa12.12□□□□□ -0.47
ABCF3-215ENST00000481116 TBC1D20Q96BZ9 403 aa12.12□□□□□ -0.47
ABCF3-215ENST00000481116 SNRNP40Q96DI7 357 aaKnown RBP12.12□□□□□ -0.47
ABCF3-215ENST00000481116 MS4A6EQ96DS6 147 aa12.12□□□□□ -0.47
ABCF3-215ENST00000481116 PTCD3Q96EY7 689 aaKnown RBP12.12□□□□□ -0.47
ABCF3-215ENST00000481116 MAGEB10Q96LZ2 347 aaPredicted RBP12.12□□□□□ -0.47
ABCF3-215ENST00000481116 GPR78Q96P69 363 aa12.12□□□□□ -0.47
ABCF3-215ENST00000481116 WDR77Q9BQA1 342 aaPredicted RBP12.12□□□□□ -0.47
ABCF3-215ENST00000481116 TUBB6Q9BUF5 446 aa12.12□□□□□ -0.47
ABCF3-215ENST00000481116 CAPS2Q9BXY5 557 aa12.12□□□□□ -0.47
ABCF3-215ENST00000481116 TSPYL1Q9H0U9 437 aa12.12□□□□□ -0.47
ABCF3-215ENST00000481116 EPS8L2Q9H6S3 715 aa12.12□□□□□ -0.47
ABCF3-215ENST00000481116 NT5DC2Q9H857 520 aa12.12□□□□□ -0.47
ABCF3-215ENST00000481116 NTNG1Q9Y2I2 539 aa12.12□□□□□ -0.47
ABCF3-215ENST00000481116 LRIT2A6NDA9 550 aa12.11□□□□□ -0.47
ABCF3-215ENST00000481116 ERI3O43414 337 aaKnown RBP12.11□□□□□ -0.47
ABCF3-215ENST00000481116 WFS1O76024 890 aa12.11□□□□□ -0.47
ABCF3-215ENST00000481116 UQCRHP07919 91 aa12.11□□□□□ -0.47
ABCF3-215ENST00000481116 MAOAP21397 527 aa12.11□□□□□ -0.47
ABCF3-215ENST00000481116 SOX11P35716 441 aa12.11□□□□□ -0.47
ABCF3-215ENST00000481116 MSH2P43246 934 aa12.11□□□□□ -0.47
ABCF3-215ENST00000481116 PLA2G16P53816 162 aa12.11□□□□□ -0.47
ABCF3-215ENST00000481116 STXBP1P61764 594 aaKnown RBP12.11□□□□□ -0.47
ABCF3-215ENST00000481116 IRF8Q02556 426 aa12.11□□□□□ -0.47
ABCF3-215ENST00000481116 SRSF1Q07955 248 aaKnown RBP eCLIP12.11□□□□□ -0.47
ABCF3-215ENST00000481116 MFAP5Q13361 173 aa12.11□□□□□ -0.47
ABCF3-215ENST00000481116 ACAP2Q15057 778 aa12.11□□□□□ -0.47
ABCF3-215ENST00000481116 NSDHLQ15738 373 aa12.11□□□□□ -0.47
ABCF3-215ENST00000481116 PFKFB4Q16877 469 aa12.11□□□□□ -0.47
ABCF3-215ENST00000481116 BTBD16Q32M84 506 aa12.11□□□□□ -0.47
ABCF3-215ENST00000481116 FCRLBQ6BAA4 426 aa12.11□□□□□ -0.47
ABCF3-215ENST00000481116 LRRC70Q7Z2Q7 622 aa12.11□□□□□ -0.47
ABCF3-215ENST00000481116 GSPT2Q8IYD1 628 aaKnown RBP12.11□□□□□ -0.47
ABCF3-215ENST00000481116 IQCKQ8N0W5 287 aa12.11□□□□□ -0.47
ABCF3-215ENST00000481116 RNF175Q8N4F7 328 aa12.11□□□□□ -0.47
ABCF3-215ENST00000481116 TEX9Q8N6V9 391 aa12.11□□□□□ -0.47
ABCF3-215ENST00000481116 RHEBL1Q8TAI7 183 aa12.11□□□□□ -0.47
ABCF3-215ENST00000481116 PPP4R1Q8TF05 950 aa12.11□□□□□ -0.47
ABCF3-215ENST00000481116 UBTD2Q8WUN7 234 aa12.11□□□□□ -0.47
ABCF3-215ENST00000481116 GAL3ST3Q96A11 431 aa12.11□□□□□ -0.47
ABCF3-215ENST00000481116 WDR34Q96EX3 536 aa12.11□□□□□ -0.47
ABCF3-215ENST00000481116 OR1F2PQ96R84 312 aa12.11□□□□□ -0.47
ABCF3-215ENST00000481116 F2RL3Q96RI0 385 aa12.11□□□□□ -0.47
ABCF3-215ENST00000481116 EHD1Q9H4M9 534 aa12.11□□□□□ -0.47
ABCF3-215ENST00000481116 ASF1BQ9NVP2 202 aa12.11□□□□□ -0.47
ABCF3-215ENST00000481116 CPSF2Q9P2I0 782 aaKnown RBP12.11□□□□□ -0.47
ABCF3-215ENST00000481116 COPG2Q9UBF2 871 aa12.11□□□□□ -0.47
ABCF3-215ENST00000481116 OPTCQ9UBM4 332 aa12.11□□□□□ -0.47
ABCF3-215ENST00000481116 ESPL1Q14674 2120 aa12.11□□□□□ -0.47
ABCF3-215ENST00000481116 A0A087WUV0 522 aaPredicted RBP12.1□□□□□ -0.47
ABCF3-215ENST00000481116 A8MUA0 341 aa12.1□□□□□ -0.47
ABCF3-215ENST00000481116 A8MUI8 341 aa12.1□□□□□ -0.47
ABCF3-215ENST00000481116 TRIM49D1C9J1S8 452 aa12.1□□□□□ -0.47
ABCF3-215ENST00000481116 K7EPI3 171 aa12.1□□□□□ -0.47
ABCF3-215ENST00000481116 PCDH17O14917 1159 aa12.1□□□□□ -0.47
ABCF3-215ENST00000481116 VPS4BO75351 444 aa12.1□□□□□ -0.47
ABCF3-215ENST00000481116 CLEC3AO75596 197 aa12.1□□□□□ -0.47
ABCF3-215ENST00000481116 SIX3O95343 332 aaPredicted RBP12.1□□□□□ -0.47
ABCF3-215ENST00000481116 PCNAP12004 261 aa12.1□□□□□ -0.47
ABCF3-215ENST00000481116 RNH1P13489 461 aaKnown RBP12.1□□□□□ -0.47
ABCF3-215ENST00000481116 GFAPP14136 432 aa12.1□□□□□ -0.47
ABCF3-215ENST00000481116 IL10P22301 178 aa12.1□□□□□ -0.47
ABCF3-215ENST00000481116 GCAP28676 217 aa12.1□□□□□ -0.47
ABCF3-215ENST00000481116 MAGEA12P43365 314 aa12.1□□□□□ -0.47
ABCF3-215ENST00000481116 OR4D2P58180 307 aa12.1□□□□□ -0.47
ABCF3-215ENST00000481116 SKP1P63208 163 aa12.1□□□□□ -0.47
ABCF3-215ENST00000481116 ACTN3Q08043 901 aaPredicted RBP12.1□□□□□ -0.47
ABCF3-215ENST00000481116 MRPL49Q13405 166 aaKnown RBP12.1□□□□□ -0.47
ABCF3-215ENST00000481116 SETDB1Q15047 1291 aa12.1□□□□□ -0.47
ABCF3-215ENST00000481116 TECRLQ5HYJ1 363 aa12.1□□□□□ -0.47
ABCF3-215ENST00000481116 CRB2Q5IJ48 1285 aa12.1□□□□□ -0.47
ABCF3-215ENST00000481116 PAPD4Q6PIY7 484 aaKnown RBP12.1□□□□□ -0.47
ABCF3-215ENST00000481116 ATCAYQ86WG3 371 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms