RNA–Protein interactions for RNA: ENST00000480461.1

TRA2B-212, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 538 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-212ENST00000480461 HTR6P50406 440 aa11.61□□□□□ -0.55
TRA2B-212ENST00000480461 ATP1A2P50993 1020 aa11.61□□□□□ -0.55
TRA2B-212ENST00000480461 PKNOX1P55347 436 aa11.61□□□□□ -0.55
TRA2B-212ENST00000480461 FOXL2P58012 376 aa11.61□□□□□ -0.55
TRA2B-212ENST00000480461 RPS13P62277 151 aaKnown RBP11.61□□□□□ -0.55
TRA2B-212ENST00000480461 CLN3Q13286 438 aa11.61□□□□□ -0.55
TRA2B-212ENST00000480461 HIST2H2ACQ16777 129 aaPredicted RBP11.61□□□□□ -0.55
TRA2B-212ENST00000480461 FAM214AQ32MH5 1076 aa11.61□□□□□ -0.55
TRA2B-212ENST00000480461 ADPRMQ3LIE5 342 aa11.61□□□□□ -0.55
TRA2B-212ENST00000480461 LINC00303Q3SY05 128 aa11.61□□□□□ -0.55
TRA2B-212ENST00000480461 PAGE2BQ5JRK9 111 aa11.61□□□□□ -0.55
TRA2B-212ENST00000480461 CFAP157Q5JU67 520 aa11.61□□□□□ -0.55
TRA2B-212ENST00000480461 MANEAQ5SRI9 462 aa11.61□□□□□ -0.55
TRA2B-212ENST00000480461 HHATQ5VTY9 493 aa11.61□□□□□ -0.55
TRA2B-212ENST00000480461 FAM69BQ5VUD6 431 aa11.61□□□□□ -0.55
TRA2B-212ENST00000480461 FRG2Q64ET8 278 aa11.61□□□□□ -0.55
TRA2B-212ENST00000480461 CLEC6AQ6EIG7 209 aa11.61□□□□□ -0.55
TRA2B-212ENST00000480461 HIST2H2AA3Q6FI13 130 aa11.61□□□□□ -0.55
TRA2B-212ENST00000480461 SCIMPQ6UWF3 145 aa11.61□□□□□ -0.55
TRA2B-212ENST00000480461 C6orf15Q6UXA7 325 aaPredicted RBP11.61□□□□□ -0.55
TRA2B-212ENST00000480461 COX15Q7KZN9 410 aa11.61□□□□□ -0.55
TRA2B-212ENST00000480461 DSELQ8IZU8 1212 aa11.61□□□□□ -0.55
TRA2B-212ENST00000480461 CAMKVQ8NCB2 501 aa11.61□□□□□ -0.55
TRA2B-212ENST00000480461 TRPV3Q8NET8 790 aa11.61□□□□□ -0.55
TRA2B-212ENST00000480461 OR9A4Q8NGU2 314 aa11.61□□□□□ -0.55
TRA2B-212ENST00000480461 UTP15Q8TED0 518 aaKnown RBP11.61□□□□□ -0.55
TRA2B-212ENST00000480461 MS4A6EQ96DS6 147 aa11.61□□□□□ -0.55
TRA2B-212ENST00000480461 CLIP3Q96DZ5 547 aa11.61□□□□□ -0.55
TRA2B-212ENST00000480461 LRFN5Q96NI6 719 aa11.61□□□□□ -0.55
TRA2B-212ENST00000480461 FRG2BQ96QU4 278 aa11.61□□□□□ -0.55
TRA2B-212ENST00000480461 HBEGFQ99075 208 aa11.61□□□□□ -0.55
TRA2B-212ENST00000480461 SORT1Q99523 831 aa11.61□□□□□ -0.55
TRA2B-212ENST00000480461 NDC1Q9BTX1 674 aa11.61□□□□□ -0.55
TRA2B-212ENST00000480461 MS4A8Q9BY19 250 aa11.61□□□□□ -0.55
TRA2B-212ENST00000480461 OR51B5Q9H339 312 aa11.61□□□□□ -0.55
TRA2B-212ENST00000480461 LHX9Q9NQ69 397 aa11.61□□□□□ -0.55
TRA2B-212ENST00000480461 PRDM7Q9NQW5 492 aa11.61□□□□□ -0.55
TRA2B-212ENST00000480461 IRAK4Q9NWZ3 460 aa11.61□□□□□ -0.55
TRA2B-212ENST00000480461 TRPS1Q9UHF7 1281 aa11.61□□□□□ -0.55
TRA2B-212ENST00000480461 ZDHHC2Q9UIJ5 367 aa11.61□□□□□ -0.55
TRA2B-212ENST00000480461 PCDHGA11Q9Y5H2 935 aa11.61□□□□□ -0.55
TRA2B-212ENST00000480461 MAU2Q9Y6X3 613 aa11.61□□□□□ -0.55
TRA2B-212ENST00000480461 MYO9AB2RTY4 2548 aa11.61□□□□□ -0.55
TRA2B-212ENST00000480461 SDK2Q58EX2 2172 aa11.61□□□□□ -0.55
TRA2B-212ENST00000480461 A0A0A6YYC8 382 aaPredicted RBP11.6□□□□□ -0.55
TRA2B-212ENST00000480461 A0A0G2JN53 185 aa11.6□□□□□ -0.55
TRA2B-212ENST00000480461 LOC101059948A0A1B0GTJ6 334 aa11.6□□□□□ -0.55
TRA2B-212ENST00000480461 I3L1I5 382 aaPredicted RBP11.6□□□□□ -0.55
TRA2B-212ENST00000480461 FOXE1O00358 373 aaPredicted RBP11.6□□□□□ -0.55
TRA2B-212ENST00000480461 SAP18O00422 153 aaKnown RBP11.6□□□□□ -0.55
TRA2B-212ENST00000480461 SUV39H1O43463 412 aa11.6□□□□□ -0.55
TRA2B-212ENST00000480461 RAD1O60671 282 aa11.6□□□□□ -0.55
TRA2B-212ENST00000480461 CPNE3O75131 537 aaKnown RBP11.6□□□□□ -0.55
TRA2B-212ENST00000480461 KLHL18O94889 574 aa11.6□□□□□ -0.55
TRA2B-212ENST00000480461 SERPINE1P05121 402 aa11.6□□□□□ -0.55
TRA2B-212ENST00000480461 FGF4P08620 206 aa11.6□□□□□ -0.55
TRA2B-212ENST00000480461 ZNF888P0CJ79 500 aaPredicted RBP11.6□□□□□ -0.55
TRA2B-212ENST00000480461 WT1P19544 449 aaPredicted RBP11.6□□□□□ -0.55
TRA2B-212ENST00000480461 ARL1P40616 181 aaPredicted RBP11.6□□□□□ -0.55
TRA2B-212ENST00000480461 PIK3CBP42338 1070 aa11.6□□□□□ -0.55
TRA2B-212ENST00000480461 ARSFP54793 590 aa11.6□□□□□ -0.55
TRA2B-212ENST00000480461 RAB8AP61006 207 aa11.6□□□□□ -0.55
TRA2B-212ENST00000480461 PPP2R2AP63151 447 aa11.6□□□□□ -0.55
TRA2B-212ENST00000480461 BST1Q10588 318 aa11.6□□□□□ -0.55
TRA2B-212ENST00000480461 DDX39BQ13838 428 aaKnown RBP11.6□□□□□ -0.55
TRA2B-212ENST00000480461 FAM53BQ14153 422 aa11.6□□□□□ -0.55
TRA2B-212ENST00000480461 RCN2Q14257 317 aa11.6□□□□□ -0.55
TRA2B-212ENST00000480461 ABRAXAS2Q15018 415 aa11.6□□□□□ -0.55
TRA2B-212ENST00000480461 TOR1AIP1Q5JTV8 583 aa11.6□□□□□ -0.55
TRA2B-212ENST00000480461 DEPDC1Q5TB30 811 aa11.6□□□□□ -0.55
TRA2B-212ENST00000480461 GARNL3Q5VVW2 1013 aa11.6□□□□□ -0.55
TRA2B-212ENST00000480461 CUZD1Q86UP6 607 aa11.6□□□□□ -0.55
TRA2B-212ENST00000480461 GOLGA6L1Q8N7Z2 621 aa11.6□□□□□ -0.55
TRA2B-212ENST00000480461 ZCCHC10Q8TBK6 192 aa11.6□□□□□ -0.55
TRA2B-212ENST00000480461 METTL6Q8TCB7 284 aa11.6□□□□□ -0.55
TRA2B-212ENST00000480461 UBE2E3Q969T4 207 aa11.6□□□□□ -0.55
TRA2B-212ENST00000480461 QRFPRQ96P65 431 aa11.6□□□□□ -0.55
TRA2B-212ENST00000480461 SORBS1Q9BX66 1292 aaKnown RBP11.6□□□□□ -0.55
TRA2B-212ENST00000480461 CHST8Q9H2A9 424 aa11.6□□□□□ -0.55
TRA2B-212ENST00000480461 TUBB1Q9H4B7 451 aa11.6□□□□□ -0.55
TRA2B-212ENST00000480461 DMRT3Q9NQL9 472 aa11.6□□□□□ -0.55
TRA2B-212ENST00000480461 NKIRAS1Q9NYS0 192 aa11.6□□□□□ -0.55
TRA2B-212ENST00000480461 PADI1Q9ULC6 663 aa11.6□□□□□ -0.55
TRA2B-212ENST00000480461 PTGDR2Q9Y5Y4 395 aa11.6□□□□□ -0.55
TRA2B-212ENST00000480461 SLC22A7Q9Y694 548 aa11.6□□□□□ -0.55
TRA2B-212ENST00000480461 AHCTF1Q8WYP5 2266 aa11.6□□□□□ -0.55
TRA2B-212ENST00000480461 A0A1B0GX78 115 aa11.59□□□□□ -0.55
TRA2B-212ENST00000480461 STMND1H3BQB6 276 aa11.59□□□□□ -0.55
TRA2B-212ENST00000480461 SGK494L7N484 410 aa11.59□□□□□ -0.55
TRA2B-212ENST00000480461 RTCAO00442 366 aaKnown RBP11.59□□□□□ -0.55
TRA2B-212ENST00000480461 TXNDC9O14530 226 aa11.59□□□□□ -0.55
TRA2B-212ENST00000480461 GALR3O60755 368 aaPredicted RBP11.59□□□□□ -0.55
TRA2B-212ENST00000480461 SLC35G6P0C7Q6 338 aa11.59□□□□□ -0.55
TRA2B-212ENST00000480461 IL1RNP18510 177 aa11.59□□□□□ -0.55
TRA2B-212ENST00000480461 STAT5AP42229 794 aa11.59□□□□□ -0.55
TRA2B-212ENST00000480461 ABCE1P61221 599 aaKnown RBP11.59□□□□□ -0.55
TRA2B-212ENST00000480461 NAA20P61599 178 aa11.59□□□□□ -0.55
TRA2B-212ENST00000480461 MAT1AQ00266 395 aaKnown RBP11.59□□□□□ -0.55
TRA2B-212ENST00000480461 ABHD18Q0P651 414 aa11.59□□□□□ -0.55
TRA2B-212ENST00000480461 GALNT1Q10472 559 aaPredicted RBP11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms