RNA–Protein interactions for RNA: ENST00000479615.5

PRKN-207, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 5

Gene PRKN, Length 904 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-207ENST00000479615 PLEKHB1Q9UF11 243 aaPredicted RBP14.17□□□□□ -0.14
PRKN-207ENST00000479615 DOCK10Q96BY6 2186 aa14.17□□□□□ -0.14
PRKN-207ENST00000479615 PRRC2CQ9Y520 2896 aaKnown RBP14.16□□□□□ -0.14
PRKN-207ENST00000479615 ANKDD1BA6NHY2 528 aa14.16□□□□□ -0.14
PRKN-207ENST00000479615 CXorf49A8MYA2 514 aaPredicted RBP14.16□□□□□ -0.14
PRKN-207ENST00000479615 PRAMEF2O60811 474 aa14.16□□□□□ -0.14
PRKN-207ENST00000479615 CLEC3AO75596 197 aa14.16□□□□□ -0.14
PRKN-207ENST00000479615 RASAL1O95294 804 aa14.16□□□□□ -0.14
PRKN-207ENST00000479615 MLYCDO95822 493 aa14.16□□□□□ -0.14
PRKN-207ENST00000479615 CD1DP15813 335 aa14.16□□□□□ -0.14
PRKN-207ENST00000479615 MAGEA4P43358 317 aa14.16□□□□□ -0.14
PRKN-207ENST00000479615 EFNA3P52797 238 aa14.16□□□□□ -0.14
PRKN-207ENST00000479615 TGM3Q08188 693 aa14.16□□□□□ -0.14
PRKN-207ENST00000479615 HIST2H2ACQ16777 129 aaPredicted RBP14.16□□□□□ -0.14
PRKN-207ENST00000479615 ZNF800Q2TB10 664 aaPredicted RBP eCLIP14.16□□□□□ -0.14
PRKN-207ENST00000479615 C4orf17Q53FE4 359 aa14.16□□□□□ -0.14
PRKN-207ENST00000479615 HIST2H2AA3Q6FI13 130 aa14.16□□□□□ -0.14
PRKN-207ENST00000479615 TBC1D1Q86TI0 1168 aaPredicted RBP14.16□□□□□ -0.14
PRKN-207ENST00000479615 PDPRQ8NCN5 879 aa14.16□□□□□ -0.14
PRKN-207ENST00000479615 OR5T3Q8NGG3 340 aa14.16□□□□□ -0.14
PRKN-207ENST00000479615 UBE2E3Q969T4 207 aa14.16□□□□□ -0.14
PRKN-207ENST00000479615 WDR34Q96EX3 536 aa14.16□□□□□ -0.14
PRKN-207ENST00000479615 PTCD3Q96EY7 689 aaKnown RBP14.16□□□□□ -0.14
PRKN-207ENST00000479615 MAGEB10Q96LZ2 347 aaPredicted RBP14.16□□□□□ -0.14
PRKN-207ENST00000479615 PTCHD1Q96NR3 888 aa14.16□□□□□ -0.14
PRKN-207ENST00000479615 UTP23Q9BRU9 249 aaKnown RBP14.16□□□□□ -0.14
PRKN-207ENST00000479615 EFCAB11Q9BUY7 163 aa14.16□□□□□ -0.14
PRKN-207ENST00000479615 PRDM9Q9NQV7 894 aa14.16□□□□□ -0.14
PRKN-207ENST00000479615 MMACHCQ9Y4U1 282 aa14.16□□□□□ -0.14
PRKN-207ENST00000479615 IGHV3-20A0A0C4DH32 117 aa14.15□□□□□ -0.14
PRKN-207ENST00000479615 A0A1B0GUH1 482 aa14.15□□□□□ -0.14
PRKN-207ENST00000479615 LRIT2A6NDA9 550 aa14.15□□□□□ -0.14
PRKN-207ENST00000479615 ZNF860A6NHJ4 632 aa14.15□□□□□ -0.14
PRKN-207ENST00000479615 CLDN4O14493 209 aa14.15□□□□□ -0.14
PRKN-207ENST00000479615 CDC123O75794 336 aaPredicted RBP14.15□□□□□ -0.14
PRKN-207ENST00000479615 LDLRP01130 860 aa14.15□□□□□ -0.14
PRKN-207ENST00000479615 GDF5P43026 501 aa14.15□□□□□ -0.14
PRKN-207ENST00000479615 SLC26A5P58743 744 aa14.15□□□□□ -0.14
PRKN-207ENST00000479615 GPX6P59796 221 aa14.15□□□□□ -0.14
PRKN-207ENST00000479615 RAB8AP61006 207 aa14.15□□□□□ -0.14
PRKN-207ENST00000479615 MRPS25P82663 173 aaKnown RBP14.15□□□□□ -0.14
PRKN-207ENST00000479615 HYAL2Q12891 473 aa14.15□□□□□ -0.14
PRKN-207ENST00000479615 TERF2Q15554 542 aa14.15□□□□□ -0.14
PRKN-207ENST00000479615 TBCCQ15814 346 aa14.15□□□□□ -0.14
PRKN-207ENST00000479615 PDK4Q16654 411 aa14.15□□□□□ -0.14
PRKN-207ENST00000479615 KBTBD12Q3ZCT8 623 aa14.15□□□□□ -0.14
PRKN-207ENST00000479615 ZNF324BQ6AW86 544 aaPredicted RBP14.15□□□□□ -0.14
PRKN-207ENST00000479615 RAPH1Q70E73 1250 aa14.15□□□□□ -0.14
PRKN-207ENST00000479615 PPM1NQ8N819 430 aa14.15□□□□□ -0.14
PRKN-207ENST00000479615 SRFBP1Q8NEF9 429 aaKnown RBP14.15□□□□□ -0.14
PRKN-207ENST00000479615 NR4A3Q92570 626 aa14.15□□□□□ -0.14
PRKN-207ENST00000479615 ROGDIQ9GZN7 287 aa14.15□□□□□ -0.14
PRKN-207ENST00000479615 SPNS1Q9H2V7 528 aa14.15□□□□□ -0.14
PRKN-207ENST00000479615 CAB39LQ9H9S4 337 aa14.15□□□□□ -0.14
PRKN-207ENST00000479615 CD274Q9NZQ7 290 aa14.15□□□□□ -0.14
PRKN-207ENST00000479615 ERRFI1Q9UJM3 462 aaPredicted RBP14.15□□□□□ -0.14
PRKN-207ENST00000479615 PTBP2Q9UKA9 531 aaKnown RBP14.15□□□□□ -0.14
PRKN-207ENST00000479615 RNF112Q9ULX5 631 aa14.15□□□□□ -0.14
PRKN-207ENST00000479615 MRPS33Q9Y291 106 aaKnown RBP14.15□□□□□ -0.14
PRKN-207ENST00000479615 COL12A1Q99715 3063 aa14.15□□□□□ -0.14
PRKN-207ENST00000479615 POLEQ07864 2286 aa14.15□□□□□ -0.14
PRKN-207ENST00000479615 TCRBV16S1A1N1A0A5B0 115 aa14.14□□□□□ -0.15
PRKN-207ENST00000479615 NCF1BA6NI72 391 aaPredicted RBP14.14□□□□□ -0.15
PRKN-207ENST00000479615 SYCE1LA8MT33 242 aa14.14□□□□□ -0.15
PRKN-207ENST00000479615 NCF1CA8MVU1 366 aaPredicted RBP14.14□□□□□ -0.15
PRKN-207ENST00000479615 E2F3O00716 465 aa14.14□□□□□ -0.15
PRKN-207ENST00000479615 PHGDHO43175 533 aaKnown RBP14.14□□□□□ -0.15
PRKN-207ENST00000479615 B4GALT2O60909 372 aa14.14□□□□□ -0.15
PRKN-207ENST00000479615 C1QAP02745 245 aa14.14□□□□□ -0.15
PRKN-207ENST00000479615 TUBB4AP04350 444 aa14.14□□□□□ -0.15
PRKN-207ENST00000479615 CELA2AP08217 269 aa14.14□□□□□ -0.15
PRKN-207ENST00000479615 STSP08842 583 aa14.14□□□□□ -0.15
PRKN-207ENST00000479615 NCF1P14598 390 aaPredicted RBP14.14□□□□□ -0.15
PRKN-207ENST00000479615 CD46P15529 392 aa14.14□□□□□ -0.15
PRKN-207ENST00000479615 SERPINB1P30740 379 aa14.14□□□□□ -0.15
PRKN-207ENST00000479615 PHBP35232 272 aa14.14□□□□□ -0.15
PRKN-207ENST00000479615 HNF4AP41235 474 aa14.14□□□□□ -0.15
PRKN-207ENST00000479615 CASP2P42575 452 aa14.14□□□□□ -0.15
PRKN-207ENST00000479615 HSD17B7P56937 341 aa14.14□□□□□ -0.15
PRKN-207ENST00000479615 SLBPQ14493 270 aaKnown RBP eCLIP14.14□□□□□ -0.15
PRKN-207ENST00000479615 ADPRMQ3LIE5 342 aa14.14□□□□□ -0.15
PRKN-207ENST00000479615 TOR1AIP1Q5JTV8 583 aa14.14□□□□□ -0.15
PRKN-207ENST00000479615 C8orf74Q6P047 294 aa14.14□□□□□ -0.15
PRKN-207ENST00000479615 TRIM40Q6P9F5 258 aa14.14□□□□□ -0.15
PRKN-207ENST00000479615 LRRC70Q7Z2Q7 622 aa14.14□□□□□ -0.15
PRKN-207ENST00000479615 CCDC25Q86WR0 208 aa14.14□□□□□ -0.15
PRKN-207ENST00000479615 TMEM178AQ8NBL3 297 aa14.14□□□□□ -0.15
PRKN-207ENST00000479615 ELP5Q8TE02 316 aa14.14□□□□□ -0.15
PRKN-207ENST00000479615 RHBGQ9H310 441 aa14.14□□□□□ -0.15
PRKN-207ENST00000479615 NUDT4Q9NZJ9 180 aa14.14□□□□□ -0.15
PRKN-207ENST00000479615 OR2W5A6NFC9 320 aa14.13□□□□□ -0.15
PRKN-207ENST00000479615 TAPBPO15533 448 aa14.13□□□□□ -0.15
PRKN-207ENST00000479615 B3GALT2O43825 422 aa14.13□□□□□ -0.15
PRKN-207ENST00000479615 PIAS1O75925 651 aa14.13□□□□□ -0.15
PRKN-207ENST00000479615 BTN3A2P78410 334 aa14.13□□□□□ -0.15
PRKN-207ENST00000479615 GUCY2DQ02846 1103 aa14.13□□□□□ -0.15
PRKN-207ENST00000479615 RBPJQ06330 500 aa14.13□□□□□ -0.15
PRKN-207ENST00000479615 PCDH1Q08174 1060 aa14.13□□□□□ -0.15
PRKN-207ENST00000479615 WHAMMP3Q1A5X7 153 aa14.13□□□□□ -0.15
PRKN-207ENST00000479615 XKR6Q5GH73 641 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms