RNA–Protein interactions for RNA: ENST00000478050.1

SF3B6-202, Transcript of splicing factor 3b subunit 6, humanhuman

TSL 2

Gene SF3B6, Length 720 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-202ENST00000478050 ABRQ12979 859 aa4.77□□□□□ -1.65
SF3B6-202ENST00000478050 CSTF3Q12996 717 aaKnown RBP4.77□□□□□ -1.65
SF3B6-202ENST00000478050 IL18R1Q13478 541 aa4.77□□□□□ -1.65
SF3B6-202ENST00000478050 KCNC3Q14003 757 aa4.77□□□□□ -1.65
SF3B6-202ENST00000478050 DMC1Q14565 340 aa4.77□□□□□ -1.65
SF3B6-202ENST00000478050 RAB39AQ14964 217 aa4.77□□□□□ -1.65
SF3B6-202ENST00000478050 PON2Q15165 354 aa4.77□□□□□ -1.65
SF3B6-202ENST00000478050 VMACQ2NL98 169 aa4.77□□□□□ -1.65
SF3B6-202ENST00000478050 GAB4Q2WGN9 574 aa4.77□□□□□ -1.65
SF3B6-202ENST00000478050 PYCR3Q53H96 274 aa4.77□□□□□ -1.65
SF3B6-202ENST00000478050 CARD16Q5EG05 197 aa4.77□□□□□ -1.65
SF3B6-202ENST00000478050 SGO1Q5FBB7 561 aa4.77□□□□□ -1.65
SF3B6-202ENST00000478050 ZC3H12BQ5HYM0 836 aaKnown RBP4.77□□□□□ -1.65
SF3B6-202ENST00000478050 FAM209AQ5JX71 171 aa4.77□□□□□ -1.65
SF3B6-202ENST00000478050 TMEM240Q5SV17 173 aa4.77□□□□□ -1.65
SF3B6-202ENST00000478050 OTUD3Q5T2D3 398 aaPredicted RBP4.77□□□□□ -1.65
SF3B6-202ENST00000478050 YOD1Q5VVQ6 348 aaPredicted RBP4.77□□□□□ -1.65
SF3B6-202ENST00000478050 LRRC66Q68CR7 880 aa4.77□□□□□ -1.65
SF3B6-202ENST00000478050 ERICH5Q6P6B1 374 aa4.77□□□□□ -1.65
SF3B6-202ENST00000478050 TBPL2Q6SJ96 375 aa4.77□□□□□ -1.65
SF3B6-202ENST00000478050 SUSD1Q6UWL2 747 aa4.77□□□□□ -1.65
SF3B6-202ENST00000478050 ENPP6Q6UWR7 440 aa4.77□□□□□ -1.65
SF3B6-202ENST00000478050 CCDC149Q6ZUS6 474 aa4.77□□□□□ -1.65
SF3B6-202ENST00000478050 KCTD8Q6ZWB6 473 aa4.77□□□□□ -1.65
SF3B6-202ENST00000478050 TSPAN33Q86UF1 283 aa4.77□□□□□ -1.65
SF3B6-202ENST00000478050 HIPK1Q86Z02 1210 aa4.77□□□□□ -1.65
SF3B6-202ENST00000478050 TMC8Q8IU68 726 aa4.77□□□□□ -1.65
SF3B6-202ENST00000478050 RASGRP3Q8IV61 690 aa4.77□□□□□ -1.65
SF3B6-202ENST00000478050 MCATQ8IVS2 390 aaKnown RBP4.77□□□□□ -1.65
SF3B6-202ENST00000478050 BBS7Q8IWZ6 715 aa4.77□□□□□ -1.65
SF3B6-202ENST00000478050 MSRB3Q8IXL7 192 aa4.77□□□□□ -1.65
SF3B6-202ENST00000478050 KLHDC8AQ8IYD2 350 aa4.77□□□□□ -1.65
SF3B6-202ENST00000478050 ADGRG2Q8IZP9 1017 aa4.77□□□□□ -1.65
SF3B6-202ENST00000478050 OFCC1Q8IZS5 231 aa4.77□□□□□ -1.65
SF3B6-202ENST00000478050 C8orf59Q8N0T1 100 aaPredicted RBP4.77□□□□□ -1.65
SF3B6-202ENST00000478050 ELMOD1Q8N336 334 aa4.77□□□□□ -1.65
SF3B6-202ENST00000478050 ZCCHC7Q8N3Z6 543 aaKnown RBP4.77□□□□□ -1.65
SF3B6-202ENST00000478050 KRTCAP2Q8N6L1 136 aa4.77□□□□□ -1.65
SF3B6-202ENST00000478050 L3MBTL4Q8NA19 623 aa4.77□□□□□ -1.65
SF3B6-202ENST00000478050 OR10A6Q8NH74 314 aa4.77□□□□□ -1.65
SF3B6-202ENST00000478050 B4GALNT2Q8NHY0 566 aa4.77□□□□□ -1.65
SF3B6-202ENST00000478050 FBXO30Q8TB52 745 aa4.77□□□□□ -1.65
SF3B6-202ENST00000478050 MCOLN3Q8TDD5 553 aa4.77□□□□□ -1.65
SF3B6-202ENST00000478050 CSGALNACT1Q8TDX6 532 aa4.77□□□□□ -1.65
SF3B6-202ENST00000478050 GAB3Q8WWW8 586 aa4.77□□□□□ -1.65
SF3B6-202ENST00000478050 STARD8Q92502 1023 aa4.77□□□□□ -1.65
SF3B6-202ENST00000478050 NCLNQ969V3 563 aa4.77□□□□□ -1.65
SF3B6-202ENST00000478050 TBC1D20Q96BZ9 403 aa4.77□□□□□ -1.65
SF3B6-202ENST00000478050 C12orf43Q96C57 262 aaKnown RBP4.77□□□□□ -1.65
SF3B6-202ENST00000478050 ZNF689Q96CS4 500 aaPredicted RBP4.77□□□□□ -1.65
SF3B6-202ENST00000478050 REXO5Q96IC2 774 aaKnown RBP4.77□□□□□ -1.65
SF3B6-202ENST00000478050 METTL2AQ96IZ6 378 aaKnown RBP4.77□□□□□ -1.65
SF3B6-202ENST00000478050 LMLNQ96KR4 655 aa4.77□□□□□ -1.65
SF3B6-202ENST00000478050 FCRL1Q96LA6 429 aa4.77□□□□□ -1.65
SF3B6-202ENST00000478050 DHRS1Q96LJ7 313 aa4.77□□□□□ -1.65
SF3B6-202ENST00000478050 LGR4Q9BXB1 951 aa4.77□□□□□ -1.65
SF3B6-202ENST00000478050 ACPTQ9BZG2 426 aa4.77□□□□□ -1.65
SF3B6-202ENST00000478050 GABARAPL1Q9H0R8 117 aa4.77□□□□□ -1.65
SF3B6-202ENST00000478050 ING2Q9H160 280 aa4.77□□□□□ -1.65
SF3B6-202ENST00000478050 ELOVL6Q9H5J4 265 aa4.77□□□□□ -1.65
SF3B6-202ENST00000478050 KAT8Q9H7Z6 458 aaKnown RBP4.77□□□□□ -1.65
SF3B6-202ENST00000478050 POLR1BQ9H9Y6 1135 aa4.77□□□□□ -1.65
SF3B6-202ENST00000478050 CXorf21Q9HAI6 301 aa4.77□□□□□ -1.65
SF3B6-202ENST00000478050 PLGRKTQ9HBL7 147 aa4.77□□□□□ -1.65
SF3B6-202ENST00000478050 ZFP14Q9HCL3 533 aa4.77□□□□□ -1.65
SF3B6-202ENST00000478050 DCAF13Q9NV06 445 aaKnown RBP4.77□□□□□ -1.65
SF3B6-202ENST00000478050 DNAJC11Q9NVH1 559 aa4.77□□□□□ -1.65
SF3B6-202ENST00000478050 FAM118AQ9NWS6 357 aa4.77□□□□□ -1.65
SF3B6-202ENST00000478050 DLL3Q9NYJ7 618 aa4.77□□□□□ -1.65
SF3B6-202ENST00000478050 SLC25A37Q9NYZ2 338 aa4.77□□□□□ -1.65
SF3B6-202ENST00000478050 CHD7Q9P2D1 2997 aa4.77□□□□□ -1.65
SF3B6-202ENST00000478050 NFKBIL1Q9UBC1 381 aaPredicted RBP4.77□□□□□ -1.65
SF3B6-202ENST00000478050 HECAQ9UBI9 543 aaPredicted RBP4.77□□□□□ -1.65
SF3B6-202ENST00000478050 ZNHIT2Q9UHR6 403 aa4.77□□□□□ -1.65
SF3B6-202ENST00000478050 MUTYHQ9UIF7 546 aa4.77□□□□□ -1.65
SF3B6-202ENST00000478050 C3orf18Q9UK00 162 aa4.77□□□□□ -1.65
SF3B6-202ENST00000478050 INTS6Q9UL03 887 aaKnown RBP4.77□□□□□ -1.65
SF3B6-202ENST00000478050 SAMD4AQ9UPU9 718 aaKnown RBP4.77□□□□□ -1.65
SF3B6-202ENST00000478050 PDE10AQ9Y233 779 aa4.77□□□□□ -1.65
SF3B6-202ENST00000478050 INVSQ9Y283 1065 aa4.77□□□□□ -1.65
SF3B6-202ENST00000478050 MRPS23Q9Y3D9 190 aaKnown RBP4.77□□□□□ -1.65
SF3B6-202ENST00000478050 ORC6Q9Y5N6 252 aa4.77□□□□□ -1.65
SF3B6-202ENST00000478050 AP1M2Q9Y6Q5 423 aa4.77□□□□□ -1.65
SF3B6-202ENST00000478050 ZNF292O60281 2723 aa4.76□□□□□ -1.65
SF3B6-202ENST00000478050 BPTFQ12830 3046 aa4.76□□□□□ -1.65
SF3B6-202ENST00000478050 TRBV23-1A0A0A0MS06 115 aa4.76□□□□□ -1.65
SF3B6-202ENST00000478050 CCDC163A0A0D9SF12 145 aa4.76□□□□□ -1.65
SF3B6-202ENST00000478050 TSPAN11A1L157 253 aa4.76□□□□□ -1.65
SF3B6-202ENST00000478050 ANKRD34BA5PLL1 514 aa4.76□□□□□ -1.65
SF3B6-202ENST00000478050 TRIM64BA6NI03 449 aa4.76□□□□□ -1.65
SF3B6-202ENST00000478050 EVPLLA8MZ36 301 aa4.76□□□□□ -1.65
SF3B6-202ENST00000478050 WASH3PC4AMC7 463 aa4.76□□□□□ -1.65
SF3B6-202ENST00000478050 H3BMQ9 156 aa4.76□□□□□ -1.65
SF3B6-202ENST00000478050 GFYI3L273 518 aa4.76□□□□□ -1.65
SF3B6-202ENST00000478050 LEFTY2O00292 366 aa4.76□□□□□ -1.65
SF3B6-202ENST00000478050 RGS13O14921 159 aa4.76□□□□□ -1.65
SF3B6-202ENST00000478050 PER2O15055 1255 aa4.76□□□□□ -1.65
SF3B6-202ENST00000478050 TEX28O15482 410 aa4.76□□□□□ -1.65
SF3B6-202ENST00000478050 EFCAB14O75071 495 aa4.76□□□□□ -1.65
SF3B6-202ENST00000478050 E2F6O75461 281 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms