RNA–Protein interactions for RNA: ENST00000477757.5

PDLIM1-202, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 850 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-202ENST00000477757 IGHG3P01860 377 aa18.85■□□□□ 0.61
PDLIM1-202ENST00000477757 RAF1P04049 648 aa18.85■□□□□ 0.61
PDLIM1-202ENST00000477757 INHBBP09529 407 aa18.85■□□□□ 0.61
PDLIM1-202ENST00000477757 MPC1LP0DKB6 136 aa18.85■□□□□ 0.61
PDLIM1-202ENST00000477757 OGNP20774 298 aaKnown RBP18.85■□□□□ 0.61
PDLIM1-202ENST00000477757 MAOAP21397 527 aa18.85■□□□□ 0.61
PDLIM1-202ENST00000477757 ADSLP30566 484 aaPredicted RBP18.85■□□□□ 0.61
PDLIM1-202ENST00000477757 NAP1L1P55209 391 aaKnown RBP18.85■□□□□ 0.61
PDLIM1-202ENST00000477757 OLR1P78380 273 aa18.85■□□□□ 0.61
PDLIM1-202ENST00000477757 BTG2P78543 158 aa18.85■□□□□ 0.61
PDLIM1-202ENST00000477757 SNTB1Q13884 538 aaKnown RBP18.85■□□□□ 0.61
PDLIM1-202ENST00000477757 DEFB113Q30KQ7 82 aa18.85■□□□□ 0.61
PDLIM1-202ENST00000477757 DEFB134Q4QY38 66 aa18.85■□□□□ 0.61
PDLIM1-202ENST00000477757 FLYWCH1Q4VC44 716 aa18.85■□□□□ 0.61
PDLIM1-202ENST00000477757 NIPAL1Q6NVV3 410 aa18.85■□□□□ 0.61
PDLIM1-202ENST00000477757 ZNF585AQ6P3V2 769 aa18.85■□□□□ 0.61
PDLIM1-202ENST00000477757 UBL4BQ8N7F7 174 aa18.85■□□□□ 0.61
PDLIM1-202ENST00000477757 MFSD9Q8NBP5 474 aa18.85■□□□□ 0.61
PDLIM1-202ENST00000477757 ACRBPQ8NEB7 543 aa18.85■□□□□ 0.61
PDLIM1-202ENST00000477757 B3GNT7Q8NFL0 401 aa18.85■□□□□ 0.61
PDLIM1-202ENST00000477757 MFSD3Q96ES6 412 aa18.85■□□□□ 0.61
PDLIM1-202ENST00000477757 KIFC1Q9BW19 673 aa18.85■□□□□ 0.61
PDLIM1-202ENST00000477757 EIF2B3Q9NR50 452 aaKnown RBP18.85■□□□□ 0.61
PDLIM1-202ENST00000477757 KLHL42Q9P2K6 505 aa18.85■□□□□ 0.61
PDLIM1-202ENST00000477757 LIPGQ9Y5X9 500 aa18.85■□□□□ 0.61
PDLIM1-202ENST00000477757 COL6A5A8TX70 2615 aa18.84■□□□□ 0.61
PDLIM1-202ENST00000477757 BTNL10A8MVZ5 291 aa18.84■□□□□ 0.61
PDLIM1-202ENST00000477757 NDUFS4O43181 175 aa18.84■□□□□ 0.61
PDLIM1-202ENST00000477757 HEXAP06865 529 aa18.84■□□□□ 0.61
PDLIM1-202ENST00000477757 ENO3P13929 434 aaPredicted RBP18.84■□□□□ 0.61
PDLIM1-202ENST00000477757 ALOX12P18054 663 aa18.84■□□□□ 0.61
PDLIM1-202ENST00000477757 GRK3P35626 688 aa18.84■□□□□ 0.61
PDLIM1-202ENST00000477757 SSR4P51571 173 aa18.84■□□□□ 0.61
PDLIM1-202ENST00000477757 CLCN2P51788 898 aa18.84■□□□□ 0.61
PDLIM1-202ENST00000477757 PLGLB1Q02325 96 aa18.84■□□□□ 0.61
PDLIM1-202ENST00000477757 CUL1Q13616 776 aa18.84■□□□□ 0.61
PDLIM1-202ENST00000477757 TERF2Q15554 542 aa18.84■□□□□ 0.61
PDLIM1-202ENST00000477757 TMEM198Q66K66 360 aa18.84■□□□□ 0.61
PDLIM1-202ENST00000477757 CLEC9AQ6UXN8 241 aa18.84■□□□□ 0.61
PDLIM1-202ENST00000477757 WDR53Q7Z5U6 358 aaPredicted RBP18.84■□□□□ 0.61
PDLIM1-202ENST00000477757 PRUNE1Q86TP1 453 aa18.84■□□□□ 0.61
PDLIM1-202ENST00000477757 SLC22A16Q86VW1 577 aa18.84■□□□□ 0.61
PDLIM1-202ENST00000477757 C17orf64Q86WR6 236 aa18.84■□□□□ 0.61
PDLIM1-202ENST00000477757 PRIMA1Q86XR5 153 aa18.84■□□□□ 0.61
PDLIM1-202ENST00000477757 TC2NQ8N9U0 490 aa18.84■□□□□ 0.61
PDLIM1-202ENST00000477757 OR2M7Q8NG81 312 aa18.84■□□□□ 0.61
PDLIM1-202ENST00000477757 TTTY12Q9BZ98 90 aa18.84■□□□□ 0.61
PDLIM1-202ENST00000477757 PRDM9Q9NQV7 894 aa18.84■□□□□ 0.61
PDLIM1-202ENST00000477757 KCMF1Q9P0J7 381 aa18.84■□□□□ 0.61
PDLIM1-202ENST00000477757 B4GALT7Q9UBV7 327 aa18.84■□□□□ 0.61
PDLIM1-202ENST00000477757 CBLCQ9ULV8 474 aa18.84■□□□□ 0.61
PDLIM1-202ENST00000477757 A0A0G2JMM0 328 aa18.83■□□□□ 0.6
PDLIM1-202ENST00000477757 A0A1B0GVC2 190 aa18.83■□□□□ 0.6
PDLIM1-202ENST00000477757 A0A1W2PPB8 328 aa18.83■□□□□ 0.6
PDLIM1-202ENST00000477757 A0A1W2PRS3 328 aa18.83■□□□□ 0.6
PDLIM1-202ENST00000477757 KIR3DP1A8MWS1 328 aa18.83■□□□□ 0.6
PDLIM1-202ENST00000477757 MIF4GDA9UHW6 222 aaKnown RBP18.83■□□□□ 0.6
PDLIM1-202ENST00000477757 FAM47E-STBD1D6RA91 191 aa18.83■□□□□ 0.6
PDLIM1-202ENST00000477757 WDR1O75083 606 aa18.83■□□□□ 0.6
PDLIM1-202ENST00000477757 GLSO94925 669 aaPredicted RBP18.83■□□□□ 0.6
PDLIM1-202ENST00000477757 ETS1P14921 441 aa18.83■□□□□ 0.6
PDLIM1-202ENST00000477757 HOXC12P31275 282 aa18.83■□□□□ 0.6
PDLIM1-202ENST00000477757 CYLC1P35663 651 aaPredicted RBP18.83■□□□□ 0.6
PDLIM1-202ENST00000477757 CENPUQ71F23 418 aa18.83■□□□□ 0.6
PDLIM1-202ENST00000477757 CILP2Q8IUL8 1156 aa18.83■□□□□ 0.6
PDLIM1-202ENST00000477757 GPALPP1Q8IXQ4 340 aa18.83■□□□□ 0.6
PDLIM1-202ENST00000477757 FAM222BQ8WU58 562 aa18.83■□□□□ 0.6
PDLIM1-202ENST00000477757 REPIN1Q9BWE0 567 aaKnown RBP18.83■□□□□ 0.6
PDLIM1-202ENST00000477757 NECTIN3Q9NQS3 549 aa18.83■□□□□ 0.6
PDLIM1-202ENST00000477757 BFARQ9NZS9 450 aa18.83■□□□□ 0.6
PDLIM1-202ENST00000477757 PAK5Q9P286 719 aa18.83■□□□□ 0.6
PDLIM1-202ENST00000477757 ZNF223Q9UK11 482 aaPredicted RBP18.83■□□□□ 0.6
PDLIM1-202ENST00000477757 FBXW2Q9UKT8 454 aa18.83■□□□□ 0.6
PDLIM1-202ENST00000477757 ERVK-11Q9UQG0 969 aa18.83■□□□□ 0.6
PDLIM1-202ENST00000477757 DRG1Q9Y295 367 aaKnown RBP18.83■□□□□ 0.6
PDLIM1-202ENST00000477757 VPS9D1Q9Y2B5 631 aa18.83■□□□□ 0.6
PDLIM1-202ENST00000477757 MED16Q9Y2X0 877 aa18.83■□□□□ 0.6
PDLIM1-202ENST00000477757 KIAA1324LA8MWY0 1029 aaPredicted RBP18.82■□□□□ 0.6
PDLIM1-202ENST00000477757 CEP104O60308 925 aa18.82■□□□□ 0.6
PDLIM1-202ENST00000477757 B3GALT4O96024 378 aa18.82■□□□□ 0.6
PDLIM1-202ENST00000477757 CDH1P12830 882 aa18.82■□□□□ 0.6
PDLIM1-202ENST00000477757 NPY2RP49146 381 aa18.82■□□□□ 0.6
PDLIM1-202ENST00000477757 PWP1Q13610 501 aa18.82■□□□□ 0.6
PDLIM1-202ENST00000477757 C1orf185Q5T7R7 199 aa18.82■□□□□ 0.6
PDLIM1-202ENST00000477757 NDUFAF5Q5TEU4 345 aa18.82■□□□□ 0.6
PDLIM1-202ENST00000477757 KIAA0930Q6ICG6 404 aaPredicted RBP18.82■□□□□ 0.6
PDLIM1-202ENST00000477757 CES3Q6UWW8 571 aa18.82■□□□□ 0.6
PDLIM1-202ENST00000477757 CYHR1Q6ZMK1 362 aa18.82■□□□□ 0.6
PDLIM1-202ENST00000477757 UBE2R2Q712K3 238 aaPredicted RBP18.82■□□□□ 0.6
PDLIM1-202ENST00000477757 TRILQ7L0X0 811 aa18.82■□□□□ 0.6
PDLIM1-202ENST00000477757 PEX26Q7Z412 305 aa18.82■□□□□ 0.6
PDLIM1-202ENST00000477757 SPNS2Q8IVW8 549 aa18.82■□□□□ 0.6
PDLIM1-202ENST00000477757 ARMC2Q8NEN0 867 aa18.82■□□□□ 0.6
PDLIM1-202ENST00000477757 KCNJ9Q92806 393 aa18.82■□□□□ 0.6
PDLIM1-202ENST00000477757 SLCO2A1Q92959 643 aa18.82■□□□□ 0.6
PDLIM1-202ENST00000477757 FRMD8P1Q9BZ68 369 aaPredicted RBP18.82■□□□□ 0.6
PDLIM1-202ENST00000477757 INTS10Q9NVR2 710 aaKnown RBP18.82■□□□□ 0.6
PDLIM1-202ENST00000477757 SYBUQ9NX95 663 aa18.82■□□□□ 0.6
PDLIM1-202ENST00000477757 AMFRQ9UKV5 643 aa18.82■□□□□ 0.6
PDLIM1-202ENST00000477757 PACSIN2Q9UNF0 486 aaPredicted RBP18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 86.1 ms