RNA–Protein interactions for RNA: ENST00000477554.5

PTPN7-209, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS ALT2 TSL 2

Gene PTPN7, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-209ENST00000477554 OR51Q1Q8NH59 317 aa16.69■□□□□ 0.26
PTPN7-209ENST00000477554 RHEBL1Q8TAI7 183 aa16.69■□□□□ 0.26
PTPN7-209ENST00000477554 TCP10LQ8TDR4 215 aa16.69■□□□□ 0.26
PTPN7-209ENST00000477554 THAP11Q96EK4 314 aa16.69■□□□□ 0.26
PTPN7-209ENST00000477554 MVB12AQ96EY5 273 aa16.69■□□□□ 0.26
PTPN7-209ENST00000477554 SCYL1Q96KG9 808 aa16.69■□□□□ 0.26
PTPN7-209ENST00000477554 VN1R1Q9GZP7 353 aa16.69■□□□□ 0.26
PTPN7-209ENST00000477554 PELI2Q9HAT8 420 aa16.69■□□□□ 0.26
PTPN7-209ENST00000477554 ZNF160Q9HCG1 818 aa16.69■□□□□ 0.26
PTPN7-209ENST00000477554 GPR83Q9NYM4 423 aa16.69■□□□□ 0.26
PTPN7-209ENST00000477554 NKIRAS1Q9NYS0 192 aa16.69■□□□□ 0.26
PTPN7-209ENST00000477554 TMEM120BA0PK00 339 aa16.68■□□□□ 0.26
PTPN7-209ENST00000477554 GGT5P36269 586 aa16.68■□□□□ 0.26
PTPN7-209ENST00000477554 CASRP41180 1078 aa16.68■□□□□ 0.26
PTPN7-209ENST00000477554 XCR1P46094 333 aa16.68■□□□□ 0.26
PTPN7-209ENST00000477554 HNMTP50135 292 aa16.68■□□□□ 0.26
PTPN7-209ENST00000477554 EMP2P54851 167 aa16.68■□□□□ 0.26
PTPN7-209ENST00000477554 CDC16Q13042 620 aa16.68■□□□□ 0.26
PTPN7-209ENST00000477554 DEFB134Q4QY38 66 aa16.68■□□□□ 0.26
PTPN7-209ENST00000477554 ATG14Q6ZNE5 492 aa16.68■□□□□ 0.26
PTPN7-209ENST00000477554 Q8NA96 180 aa16.68■□□□□ 0.26
PTPN7-209ENST00000477554 STAG3L4Q8TBR4 150 aa16.68■□□□□ 0.26
PTPN7-209ENST00000477554 NT5CQ8TCD5 201 aa16.68■□□□□ 0.26
PTPN7-209ENST00000477554 UTP15Q8TED0 518 aaKnown RBP16.68■□□□□ 0.26
PTPN7-209ENST00000477554 PEX11GQ96HA9 241 aa16.68■□□□□ 0.26
PTPN7-209ENST00000477554 SMAD5Q99717 465 aaKnown RBP16.68■□□□□ 0.26
PTPN7-209ENST00000477554 MRPL57Q9BQC6 102 aaKnown RBP16.68■□□□□ 0.26
PTPN7-209ENST00000477554 TGIF2Q9GZN2 237 aa16.68■□□□□ 0.26
PTPN7-209ENST00000477554 CNOT10Q9H9A5 744 aaKnown RBP16.68■□□□□ 0.26
PTPN7-209ENST00000477554 SEMA3GQ9NS98 782 aa16.68■□□□□ 0.26
PTPN7-209ENST00000477554 FAM53CQ9NYF3 392 aa16.68■□□□□ 0.26
PTPN7-209ENST00000477554 TMEM216Q9P0N5 145 aa16.68■□□□□ 0.26
PTPN7-209ENST00000477554 ZFP69BQ9UJL9 534 aa16.68■□□□□ 0.26
PTPN7-209ENST00000477554 MKL2Q9ULH7 1088 aa16.68■□□□□ 0.26
PTPN7-209ENST00000477554 ZNF490Q9ULM2 529 aaPredicted RBP16.68■□□□□ 0.26
PTPN7-209ENST00000477554 CDC14AQ9UNH5 594 aa16.68■□□□□ 0.26
PTPN7-209ENST00000477554 KCNE2Q9Y6J6 123 aa16.68■□□□□ 0.26
PTPN7-209ENST00000477554 PRRC2CQ9Y520 2896 aaKnown RBP16.68■□□□□ 0.26
PTPN7-209ENST00000477554 UBR5O95071 2799 aaPredicted RBP16.67■□□□□ 0.26
PTPN7-209ENST00000477554 SUPT3HB4E1H0 165 aa16.67■□□□□ 0.26
PTPN7-209ENST00000477554 TXNDC9O14530 226 aa16.67■□□□□ 0.26
PTPN7-209ENST00000477554 CCNT2O60583 730 aaKnown RBP16.67■□□□□ 0.26
PTPN7-209ENST00000477554 SUPT3HO75486 399 aa16.67■□□□□ 0.26
PTPN7-209ENST00000477554 CD63P08962 238 aa16.67■□□□□ 0.26
PTPN7-209ENST00000477554 C1GALT1C1LP0DN25 315 aa16.67■□□□□ 0.26
PTPN7-209ENST00000477554 ITGA3P26006 1051 aa16.67■□□□□ 0.26
PTPN7-209ENST00000477554 HNRNPH1P31943 449 aaKnown RBP16.67■□□□□ 0.26
PTPN7-209ENST00000477554 GRK3P35626 688 aa16.67■□□□□ 0.26
PTPN7-209ENST00000477554 AVPR1BP47901 424 aa16.67■□□□□ 0.26
PTPN7-209ENST00000477554 RRADP55042 308 aa16.67■□□□□ 0.26
PTPN7-209ENST00000477554 KLRB1Q12918 225 aa16.67■□□□□ 0.26
PTPN7-209ENST00000477554 NDUFA9Q16795 377 aa16.67■□□□□ 0.26
PTPN7-209ENST00000477554 SULT1C3Q6IMI6 304 aa16.67■□□□□ 0.26
PTPN7-209ENST00000477554 MTERF4Q7Z6M4 381 aaKnown RBP16.67■□□□□ 0.26
PTPN7-209ENST00000477554 RNF175Q8N4F7 328 aa16.67■□□□□ 0.26
PTPN7-209ENST00000477554 SNX31Q8N9S9 440 aa16.67■□□□□ 0.26
PTPN7-209ENST00000477554 TEX19Q8NA77 164 aa16.67■□□□□ 0.26
PTPN7-209ENST00000477554 CLEC1AQ8NC01 280 aa16.67■□□□□ 0.26
PTPN7-209ENST00000477554 FER1L6-AS2Q96M78 137 aa16.67■□□□□ 0.26
PTPN7-209ENST00000477554 SLC6A16Q9GZN6 736 aa16.67■□□□□ 0.26
PTPN7-209ENST00000477554 MRPL46Q9H2W6 279 aaKnown RBP16.67■□□□□ 0.26
PTPN7-209ENST00000477554 MKKSQ9NPJ1 570 aaPredicted RBP16.67■□□□□ 0.26
PTPN7-209ENST00000477554 DNAJC11Q9NVH1 559 aa16.67■□□□□ 0.26
PTPN7-209ENST00000477554 MID2Q9UJV3 735 aa16.67■□□□□ 0.26
PTPN7-209ENST00000477554 NXT1Q9UKK6 140 aaKnown RBP16.67■□□□□ 0.26
PTPN7-209ENST00000477554 NBASA2RRP1 2371 aa16.67■□□□□ 0.26
PTPN7-209ENST00000477554 SYCE1LA8MT33 242 aa16.66■□□□□ 0.26
PTPN7-209ENST00000477554 H0YIG0 161 aa16.66■□□□□ 0.26
PTPN7-209ENST00000477554 PLIN3O60664 434 aa16.66■□□□□ 0.26
PTPN7-209ENST00000477554 GALR3O60755 368 aaPredicted RBP16.66■□□□□ 0.26
PTPN7-209ENST00000477554 KERAO60938 352 aa16.66■□□□□ 0.26
PTPN7-209ENST00000477554 HEXBP07686 556 aa16.66■□□□□ 0.26
PTPN7-209ENST00000477554 SLC35G6P0C7Q6 338 aa16.66■□□□□ 0.26
PTPN7-209ENST00000477554 SMIM10L1P0DMW3 83 aa16.66■□□□□ 0.26
PTPN7-209ENST00000477554 ST13P50502 369 aaKnown RBP16.66■□□□□ 0.26
PTPN7-209ENST00000477554 DOC2AQ14183 400 aa16.66■□□□□ 0.26
PTPN7-209ENST00000477554 MYBPC3Q14896 1274 aa16.66■□□□□ 0.26
PTPN7-209ENST00000477554 PCOLCEQ15113 449 aa16.66■□□□□ 0.26
PTPN7-209ENST00000477554 TUBB8Q3ZCM7 444 aa16.66■□□□□ 0.26
PTPN7-209ENST00000477554 TECRLQ5HYJ1 363 aa16.66■□□□□ 0.26
PTPN7-209ENST00000477554 TOR1AIP1Q5JTV8 583 aa16.66■□□□□ 0.26
PTPN7-209ENST00000477554 CCDC63Q8NA47 563 aa16.66■□□□□ 0.26
PTPN7-209ENST00000477554 FAM76AQ8TAV0 307 aa16.66■□□□□ 0.26
PTPN7-209ENST00000477554 TSLPQ969D9 159 aa16.66■□□□□ 0.26
PTPN7-209ENST00000477554 SMIM10Q96HG1 83 aa16.66■□□□□ 0.26
PTPN7-209ENST00000477554 FAM111AQ96PZ2 611 aa16.66■□□□□ 0.26
PTPN7-209ENST00000477554 AIF1LQ9BQI0 150 aa16.66■□□□□ 0.26
PTPN7-209ENST00000477554 ANKHQ9HCJ1 492 aa16.66■□□□□ 0.26
PTPN7-209ENST00000477554 LANCL2Q9NS86 450 aa16.66■□□□□ 0.26
PTPN7-209ENST00000477554 IGHV1-45A0A0A0MS14 117 aa16.65■□□□□ 0.26
PTPN7-209ENST00000477554 FAM227AF5H4B4 570 aa16.65■□□□□ 0.26
PTPN7-209ENST00000477554 STK16O75716 305 aa16.65■□□□□ 0.26
PTPN7-209ENST00000477554 PROCP04070 461 aa16.65■□□□□ 0.26
PTPN7-209ENST00000477554 ACPPP15309 386 aa16.65■□□□□ 0.26
PTPN7-209ENST00000477554 GNAZP19086 355 aa16.65■□□□□ 0.26
PTPN7-209ENST00000477554 PWP1Q13610 501 aa16.65■□□□□ 0.26
PTPN7-209ENST00000477554 MINDY4Q4G0A6 757 aa16.65■□□□□ 0.26
PTPN7-209ENST00000477554 MFSD4BQ5TF39 518 aa16.65■□□□□ 0.26
PTPN7-209ENST00000477554 TMEM205Q6UW68 189 aa16.65■□□□□ 0.26
PTPN7-209ENST00000477554 ANKRD42Q8N9B4 389 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms