RNA–Protein interactions for RNA: ENST00000476772.5

VEGFA-211, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 1,683 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-211ENST00000476772 LOXL4Q96JB6 756 aa27.47■■□□□ 1.99
VEGFA-211ENST00000476772 GTPBP2Q9BX10 602 aaKnown RBP27.47■■□□□ 1.99
VEGFA-211ENST00000476772 RAB33BQ9H082 229 aa27.47■■□□□ 1.99
VEGFA-211ENST00000476772 SLAMF8Q9P0V8 285 aa27.47■■□□□ 1.99
VEGFA-211ENST00000476772 EPHA6Q9UF33 1036 aa27.47■■□□□ 1.99
VEGFA-211ENST00000476772 PRPF19Q9UMS4 504 aaKnown RBP27.47■■□□□ 1.99
VEGFA-211ENST00000476772 H0YGG7 62 aa27.46■■□□□ 1.99
VEGFA-211ENST00000476772 B4GAT1O43505 415 aa27.46■■□□□ 1.99
VEGFA-211ENST00000476772 PDE5AO76074 875 aa27.46■■□□□ 1.99
VEGFA-211ENST00000476772 MAPK12P53778 367 aa27.46■■□□□ 1.99
VEGFA-211ENST00000476772 ARF3P61204 181 aaPredicted RBP27.46■■□□□ 1.99
VEGFA-211ENST00000476772 CAPRIN1Q14444 709 aaKnown RBP27.46■■□□□ 1.99
VEGFA-211ENST00000476772 DPY19L1Q2PZI1 675 aa27.46■■□□□ 1.99
VEGFA-211ENST00000476772 TRMT5Q32P41 509 aaKnown RBP27.46■■□□□ 1.99
VEGFA-211ENST00000476772 FAM71E1Q6IPT2 247 aa27.46■■□□□ 1.99
VEGFA-211ENST00000476772 ANKRD26P1Q6NSI1 321 aa27.46■■□□□ 1.99
VEGFA-211ENST00000476772 ZNF793Q6ZN11 406 aa27.46■■□□□ 1.99
VEGFA-211ENST00000476772 DGLUCYQ7Z3D6 616 aa27.46■■□□□ 1.99
VEGFA-211ENST00000476772 LRRC58Q96CX6 371 aa27.46■■□□□ 1.99
VEGFA-211ENST00000476772 CDRT15Q96T59 188 aa27.46■■□□□ 1.99
VEGFA-211ENST00000476772 DDX31Q9H8H2 851 aaKnown RBP27.46■■□□□ 1.99
VEGFA-211ENST00000476772 PACSIN3Q9UKS6 424 aa27.46■■□□□ 1.99
VEGFA-211ENST00000476772 MAPRE3Q9UPY8 281 aa27.46■■□□□ 1.99
VEGFA-211ENST00000476772 LY6G6EA0A0G2JKS1 128 aa27.46■■□□□ 1.99
VEGFA-211ENST00000476772 A8MUI8 341 aa27.46■■□□□ 1.99
VEGFA-211ENST00000476772 IL3P08700 152 aa27.46■■□□□ 1.99
VEGFA-211ENST00000476772 KIR3DL1P43629 444 aa27.46■■□□□ 1.99
VEGFA-211ENST00000476772 ELF3P78545 371 aaPredicted RBP27.46■■□□□ 1.99
VEGFA-211ENST00000476772 PLIN5Q00G26 463 aa27.46■■□□□ 1.99
VEGFA-211ENST00000476772 MC1RQ01726 317 aa27.46■■□□□ 1.99
VEGFA-211ENST00000476772 SRSF11Q05519 484 aaKnown RBP27.46■■□□□ 1.99
VEGFA-211ENST00000476772 NR0B2Q15466 257 aa27.46■■□□□ 1.99
VEGFA-211ENST00000476772 MAPKAPK3Q16644 382 aa27.46■■□□□ 1.99
VEGFA-211ENST00000476772 OR4F3Q6IEY1 312 aa27.46■■□□□ 1.99
VEGFA-211ENST00000476772 TRIM40Q6P9F5 258 aa27.46■■□□□ 1.99
VEGFA-211ENST00000476772 RERGQ96A58 199 aaPredicted RBP27.46■■□□□ 1.99
VEGFA-211ENST00000476772 CCDC74AQ96AQ1 378 aa27.46■■□□□ 1.99
VEGFA-211ENST00000476772 KCNC2Q96PR1 638 aa27.46■■□□□ 1.99
VEGFA-211ENST00000476772 GPATCH1Q9BRR8 931 aaKnown RBP27.46■■□□□ 1.99
VEGFA-211ENST00000476772 BTBD3Q9Y2F9 522 aa27.46■■□□□ 1.99
VEGFA-211ENST00000476772 U3KQA8 63 aa27.46■■□□□ 1.99
VEGFA-211ENST00000476772 A0A0A6YYD5 115 aa27.45■■□□□ 1.98
VEGFA-211ENST00000476772 GABRR3A8MPY1 467 aa27.45■■□□□ 1.98
VEGFA-211ENST00000476772 TMPRSS11DO60235 418 aa27.45■■□□□ 1.98
VEGFA-211ENST00000476772 B3GALT4O96024 378 aa27.45■■□□□ 1.98
VEGFA-211ENST00000476772 PIM1P11309 404 aaPredicted RBP27.45■■□□□ 1.98
VEGFA-211ENST00000476772 RAB8AP61006 207 aa27.45■■□□□ 1.98
VEGFA-211ENST00000476772 C2orf80Q0P641 193 aa27.45■■□□□ 1.98
VEGFA-211ENST00000476772 AMZ1Q400G9 498 aa27.45■■□□□ 1.98
VEGFA-211ENST00000476772 PGM2L1Q6PCE3 622 aa27.45■■□□□ 1.98
VEGFA-211ENST00000476772 ZC3H14Q6PJT7 736 aaKnown RBP27.45■■□□□ 1.98
VEGFA-211ENST00000476772 DHDDSQ86SQ9 333 aa27.45■■□□□ 1.98
VEGFA-211ENST00000476772 GPR180Q86V85 440 aa27.45■■□□□ 1.98
VEGFA-211ENST00000476772 EID2Q8N6I1 236 aa27.45■■□□□ 1.98
VEGFA-211ENST00000476772 CAMKVQ8NCB2 501 aa27.45■■□□□ 1.98
VEGFA-211ENST00000476772 GTF2H4Q92759 462 aa27.45■■□□□ 1.98
VEGFA-211ENST00000476772 ZDHHC12Q96GR4 267 aa27.45■■□□□ 1.98
VEGFA-211ENST00000476772 EPB41L1Q9H4G0 881 aa27.45■■□□□ 1.98
VEGFA-211ENST00000476772 REEP4Q9H6H4 257 aa27.45■■□□□ 1.98
VEGFA-211ENST00000476772 PRDM7Q9NQW5 492 aa27.45■■□□□ 1.98
VEGFA-211ENST00000476772 SLC7A8Q9UHI5 535 aa27.45■■□□□ 1.98
VEGFA-211ENST00000476772 TLCD2A6NGC4 264 aa27.44■■□□□ 1.98
VEGFA-211ENST00000476772 HCRTR1O43613 425 aa27.44■■□□□ 1.98
VEGFA-211ENST00000476772 DUX1O43812 170 aa27.44■■□□□ 1.98
VEGFA-211ENST00000476772 SORBS2O94875 1100 aaKnown RBP27.44■■□□□ 1.98
VEGFA-211ENST00000476772 ARFIP1P53367 373 aa27.44■■□□□ 1.98
VEGFA-211ENST00000476772 DEFB110Q30KQ9 67 aa27.44■■□□□ 1.98
VEGFA-211ENST00000476772 TCEAL6Q6IPX3 200 aa27.44■■□□□ 1.98
VEGFA-211ENST00000476772 IKBIPQ70UQ0 350 aa27.44■■□□□ 1.98
VEGFA-211ENST00000476772 MINDY1Q8N5J2 469 aa27.44■■□□□ 1.98
VEGFA-211ENST00000476772 SRFBP1Q8NEF9 429 aaKnown RBP27.44■■□□□ 1.98
VEGFA-211ENST00000476772 OR8K5Q8NH50 307 aa27.44■■□□□ 1.98
VEGFA-211ENST00000476772 TCEAL3Q969E4 200 aa27.44■■□□□ 1.98
VEGFA-211ENST00000476772 GAL3ST3Q96A11 431 aa27.44■■□□□ 1.98
VEGFA-211ENST00000476772 TM4SF18Q96CE8 201 aa27.44■■□□□ 1.98
VEGFA-211ENST00000476772 HOPXQ9BPY8 73 aaPredicted RBP27.44■■□□□ 1.98
VEGFA-211ENST00000476772 ATP6V1HQ9UI12 483 aa27.44■■□□□ 1.98
VEGFA-211ENST00000476772 PCDHGA5Q9Y5G8 931 aa27.44■■□□□ 1.98
VEGFA-211ENST00000476772 WDFY4Q6ZS81 3184 aa27.44■■□□□ 1.98
VEGFA-211ENST00000476772 DMDP11532 3685 aa27.44■■□□□ 1.98
VEGFA-211ENST00000476772 TNFRSF10AO00220 468 aa27.43■■□□□ 1.98
VEGFA-211ENST00000476772 EIF2S1P05198 315 aaKnown RBP27.43■■□□□ 1.98
VEGFA-211ENST00000476772 LAMP1P11279 417 aa27.43■■□□□ 1.98
VEGFA-211ENST00000476772 ENGP17813 658 aa27.43■■□□□ 1.98
VEGFA-211ENST00000476772 GPLD1P80108 840 aa27.43■■□□□ 1.98
VEGFA-211ENST00000476772 DLEU7Q6UYE1 221 aa27.43■■□□□ 1.98
VEGFA-211ENST00000476772 CAMKMTQ7Z624 323 aa27.43■■□□□ 1.98
VEGFA-211ENST00000476772 MMP21Q8N119 569 aa27.43■■□□□ 1.98
VEGFA-211ENST00000476772 FAM181AQ8N9Y4 354 aa27.43■■□□□ 1.98
VEGFA-211ENST00000476772 OR8J2Q8NGG1 315 aa27.43■■□□□ 1.98
VEGFA-211ENST00000476772 TBCDQ9BTW9 1192 aa27.43■■□□□ 1.98
VEGFA-211ENST00000476772 ZMYND15Q9H091 742 aa27.43■■□□□ 1.98
VEGFA-211ENST00000476772 SPAG4Q9NPE6 437 aa27.43■■□□□ 1.98
VEGFA-211ENST00000476772 ADA2Q9NZK5 511 aa27.43■■□□□ 1.98
VEGFA-211ENST00000476772 KLHL3Q9UH77 587 aa27.43■■□□□ 1.98
VEGFA-211ENST00000476772 FURINP09958 794 aa27.43■■□□□ 1.98
VEGFA-211ENST00000476772 ZNF888P0CJ79 500 aaPredicted RBP27.43■■□□□ 1.98
VEGFA-211ENST00000476772 HIST1H1TP22492 207 aaPredicted RBP27.43■■□□□ 1.98
VEGFA-211ENST00000476772 ATP5A1P25705 553 aaKnown RBP27.43■■□□□ 1.98
VEGFA-211ENST00000476772 MTTPP55157 894 aa27.43■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms