RNA–Protein interactions for RNA: ENST00000476594.1

CCM2-208, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 533 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-208ENST00000476594 UTP15Q8TED0 518 aaKnown RBP9.64□□□□□ -0.87
CCM2-208ENST00000476594 REPS1Q96D71 796 aa9.64□□□□□ -0.87
CCM2-208ENST00000476594 MRRFQ96E11 262 aaKnown RBP9.64□□□□□ -0.87
CCM2-208ENST00000476594 TMEM79Q9BSE2 394 aa9.64□□□□□ -0.87
CCM2-208ENST00000476594 NPLQ9BXD5 320 aaPredicted RBP9.64□□□□□ -0.87
CCM2-208ENST00000476594 CD244Q9BZW8 370 aa9.64□□□□□ -0.87
CCM2-208ENST00000476594 CDC42EP4Q9H3Q1 356 aaKnown RBP9.64□□□□□ -0.87
CCM2-208ENST00000476594 SYNPO2LQ9H987 977 aa9.64□□□□□ -0.87
CCM2-208ENST00000476594 SNX15Q9NRS6 342 aa9.64□□□□□ -0.87
CCM2-208ENST00000476594 PTGFRNQ9P2B2 879 aa9.64□□□□□ -0.87
CCM2-208ENST00000476594 COPG2Q9UBF2 871 aa9.64□□□□□ -0.87
CCM2-208ENST00000476594 ADGRE2Q9UHX3 823 aa9.64□□□□□ -0.87
CCM2-208ENST00000476594 PTBP2Q9UKA9 531 aaKnown RBP9.64□□□□□ -0.87
CCM2-208ENST00000476594 PLAAQ9Y263 795 aa9.64□□□□□ -0.87
CCM2-208ENST00000476594 TNPO3Q9Y5L0 923 aaKnown RBP9.64□□□□□ -0.87
CCM2-208ENST00000476594 COPG1Q9Y678 874 aaKnown RBP9.64□□□□□ -0.87
CCM2-208ENST00000476594 SPACA6W5XKT8 324 aa9.64□□□□□ -0.87
CCM2-208ENST00000476594 TNRC6AQ8NDV7 1962 aaKnown RBP9.64□□□□□ -0.87
CCM2-208ENST00000476594 UBR5O95071 2799 aaPredicted RBP9.63□□□□□ -0.87
CCM2-208ENST00000476594 A0A096LPK6 155 aa9.63□□□□□ -0.87
CCM2-208ENST00000476594 TRAV17A0A0B4J275 112 aa9.63□□□□□ -0.87
CCM2-208ENST00000476594 ZNF860A6NHJ4 632 aa9.63□□□□□ -0.87
CCM2-208ENST00000476594 CDK2AP1O14519 115 aa9.63□□□□□ -0.87
CCM2-208ENST00000476594 ERI3O43414 337 aaKnown RBP9.63□□□□□ -0.87
CCM2-208ENST00000476594 CHST10O43529 356 aa9.63□□□□□ -0.87
CCM2-208ENST00000476594 B3GALT2O43825 422 aa9.63□□□□□ -0.87
CCM2-208ENST00000476594 PRMT3O60678 531 aa9.63□□□□□ -0.87
CCM2-208ENST00000476594 FAM155BO75949 473 aa9.63□□□□□ -0.87
CCM2-208ENST00000476594 KLHL2O95198 593 aa9.63□□□□□ -0.87
CCM2-208ENST00000476594 ACSL3O95573 720 aa9.63□□□□□ -0.87
CCM2-208ENST00000476594 C1QAP02745 245 aa9.63□□□□□ -0.87
CCM2-208ENST00000476594 C2P06681 752 aa9.63□□□□□ -0.87
CCM2-208ENST00000476594 RBP1P09455 135 aa9.63□□□□□ -0.87
CCM2-208ENST00000476594 HNF4AP41235 474 aa9.63□□□□□ -0.87
CCM2-208ENST00000476594 GDF5P43026 501 aa9.63□□□□□ -0.87
CCM2-208ENST00000476594 OR4D2P58180 307 aa9.63□□□□□ -0.87
CCM2-208ENST00000476594 RAB8AP61006 207 aa9.63□□□□□ -0.87
CCM2-208ENST00000476594 CHIT1Q13231 466 aa9.63□□□□□ -0.87
CCM2-208ENST00000476594 PCOLCEQ15113 449 aa9.63□□□□□ -0.87
CCM2-208ENST00000476594 OR4D1Q15615 310 aa9.63□□□□□ -0.87
CCM2-208ENST00000476594 TRADDQ15628 312 aa9.63□□□□□ -0.87
CCM2-208ENST00000476594 COLEC12Q5KU26 742 aa9.63□□□□□ -0.87
CCM2-208ENST00000476594 FHL5Q5TD97 284 aa9.63□□□□□ -0.87
CCM2-208ENST00000476594 METTL2BQ6P1Q9 378 aaKnown RBP9.63□□□□□ -0.87
CCM2-208ENST00000476594 PAPD4Q6PIY7 484 aaKnown RBP9.63□□□□□ -0.87
CCM2-208ENST00000476594 FAM180AQ6UWF9 173 aa9.63□□□□□ -0.87
CCM2-208ENST00000476594 LINC00696Q6ZRV3 163 aa9.63□□□□□ -0.87
CCM2-208ENST00000476594 CHSY3Q70JA7 882 aa9.63□□□□□ -0.87
CCM2-208ENST00000476594 ANKRD37Q7Z713 158 aa9.63□□□□□ -0.87
CCM2-208ENST00000476594 ISCA2Q86U28 154 aa9.63□□□□□ -0.87
CCM2-208ENST00000476594 PDSS2Q86YH6 399 aa9.63□□□□□ -0.87
CCM2-208ENST00000476594 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP9.63□□□□□ -0.87
CCM2-208ENST00000476594 FAM26EQ8N5C1 309 aa9.63□□□□□ -0.87
CCM2-208ENST00000476594 SLC5A8Q8N695 610 aa9.63□□□□□ -0.87
CCM2-208ENST00000476594 HORMAD2Q8N7B1 307 aa9.63□□□□□ -0.87
CCM2-208ENST00000476594 M1APQ8TC57 530 aa9.63□□□□□ -0.87
CCM2-208ENST00000476594 BRIX1Q8TDN6 353 aaKnown RBP9.63□□□□□ -0.87
CCM2-208ENST00000476594 UBTD2Q8WUN7 234 aa9.63□□□□□ -0.87
CCM2-208ENST00000476594 ZNF354BQ96LW1 612 aa9.63□□□□□ -0.87
CCM2-208ENST00000476594 FUT8Q9BYC5 575 aa9.63□□□□□ -0.87
CCM2-208ENST00000476594 REXO4Q9GZR2 422 aaKnown RBP9.63□□□□□ -0.87
CCM2-208ENST00000476594 RNF32Q9H0A6 362 aa9.63□□□□□ -0.87
CCM2-208ENST00000476594 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP9.63□□□□□ -0.87
CCM2-208ENST00000476594 SPNS1Q9H2V7 528 aa9.63□□□□□ -0.87
CCM2-208ENST00000476594 KCNK13Q9HB14 408 aa9.63□□□□□ -0.87
CCM2-208ENST00000476594 LUZP4Q9P127 313 aa9.63□□□□□ -0.87
CCM2-208ENST00000476594 DMGDHQ9UI17 866 aaKnown RBP9.63□□□□□ -0.87
CCM2-208ENST00000476594 MMACHCQ9Y4U1 282 aa9.63□□□□□ -0.87
CCM2-208ENST00000476594 TENM4Q6N022 2769 aa9.63□□□□□ -0.87
CCM2-208ENST00000476594 EXOC1LA0A1B0GW35 172 aa9.62□□□□□ -0.87
CCM2-208ENST00000476594 BLACEA4D250 179 aa9.62□□□□□ -0.87
CCM2-208ENST00000476594 TAPBPO15533 448 aa9.62□□□□□ -0.87
CCM2-208ENST00000476594 SMIM24O75264 130 aa9.62□□□□□ -0.87
CCM2-208ENST00000476594 JRKO75564 520 aa9.62□□□□□ -0.87
CCM2-208ENST00000476594 CDC123O75794 336 aaPredicted RBP9.62□□□□□ -0.87
CCM2-208ENST00000476594 SEC24DO94855 1032 aaPredicted RBP9.62□□□□□ -0.87
CCM2-208ENST00000476594 COL6A2P12110 1019 aa9.62□□□□□ -0.87
CCM2-208ENST00000476594 SOX11P35716 441 aa9.62□□□□□ -0.87
CCM2-208ENST00000476594 KCNC1P48547 511 aa9.62□□□□□ -0.87
CCM2-208ENST00000476594 ALDH18A1P54886 795 aaKnown RBP9.62□□□□□ -0.87
CCM2-208ENST00000476594 MTTPP55157 894 aa9.62□□□□□ -0.87
CCM2-208ENST00000476594 BTN3A2P78410 334 aa9.62□□□□□ -0.87
CCM2-208ENST00000476594 BMPR2Q13873 1038 aa9.62□□□□□ -0.87
CCM2-208ENST00000476594 DOC2AQ14183 400 aa9.62□□□□□ -0.87
CCM2-208ENST00000476594 EFTUD2Q15029 972 aaKnown RBP eCLIP9.62□□□□□ -0.87
CCM2-208ENST00000476594 MEP1AQ16819 746 aa9.62□□□□□ -0.87
CCM2-208ENST00000476594 PLEKHN1Q494U1 663 aaPredicted RBP9.62□□□□□ -0.87
CCM2-208ENST00000476594 TMEM35AQ53FP2 167 aa9.62□□□□□ -0.87
CCM2-208ENST00000476594 SFT2D3Q587I9 215 aa9.62□□□□□ -0.87
CCM2-208ENST00000476594 RPUSD3Q6P087 351 aaKnown RBP9.62□□□□□ -0.87
CCM2-208ENST00000476594 MED27Q6P2C8 311 aa9.62□□□□□ -0.87
CCM2-208ENST00000476594 TRMT10CQ7L0Y3 403 aaKnown RBP9.62□□□□□ -0.87
CCM2-208ENST00000476594 MYLK4Q86YV6 388 aaPredicted RBP9.62□□□□□ -0.87
CCM2-208ENST00000476594 SIRT6Q8N6T7 355 aa9.62□□□□□ -0.87
CCM2-208ENST00000476594 Q8NA96 180 aa9.62□□□□□ -0.87
CCM2-208ENST00000476594 NOA1Q8NC60 698 aaKnown RBP9.62□□□□□ -0.87
CCM2-208ENST00000476594 OR2L5Q8NG80 312 aa9.62□□□□□ -0.87
CCM2-208ENST00000476594 CREB3L4Q8TEY5 395 aa9.62□□□□□ -0.87
CCM2-208ENST00000476594 KCTD4Q8WVF5 259 aa9.62□□□□□ -0.87
CCM2-208ENST00000476594 SLC44A1Q8WWI5 657 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 84.9 ms