RNA–Protein interactions for RNA: ENST00000476342.1

HOXB3-208, Transcript of homeobox B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXB3, Length 1,420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-208ENST00000476342 YIPF2Q9BWQ6 316 aa28.03■■■□□ 2.08
HOXB3-208ENST00000476342 ELOVL6Q9H5J4 265 aa28.03■■■□□ 2.08
HOXB3-208ENST00000476342 CPNE5Q9HCH3 593 aa28.03■■■□□ 2.08
HOXB3-208ENST00000476342 ZNF225Q9UK10 706 aa28.03■■■□□ 2.08
HOXB3-208ENST00000476342 SNX6Q9UNH7 406 aa28.03■■■□□ 2.08
HOXB3-208ENST00000476342 PTPRQQ9UMZ3 2332 aa28.03■■■□□ 2.08
HOXB3-208ENST00000476342 A0A1B0GTL3 188 aa28.02■■■□□ 2.08
HOXB3-208ENST00000476342 K7ENP7 123 aa28.02■■■□□ 2.08
HOXB3-208ENST00000476342 SGK494L7N484 410 aa28.02■■■□□ 2.08
HOXB3-208ENST00000476342 ERI3O43414 337 aaKnown RBP28.02■■■□□ 2.08
HOXB3-208ENST00000476342 GALR3O60755 368 aaPredicted RBP28.02■■■□□ 2.08
HOXB3-208ENST00000476342 CREG1O75629 220 aa28.02■■■□□ 2.08
HOXB3-208ENST00000476342 OR4F21O95013 312 aa28.02■■■□□ 2.08
HOXB3-208ENST00000476342 TBX6O95947 436 aaPredicted RBP28.02■■■□□ 2.08
HOXB3-208ENST00000476342 WT1P19544 449 aaPredicted RBP28.02■■■□□ 2.08
HOXB3-208ENST00000476342 RPS18P62269 152 aaKnown RBP28.02■■■□□ 2.08
HOXB3-208ENST00000476342 INO80CQ6PI98 192 aaPredicted RBP28.02■■■□□ 2.08
HOXB3-208ENST00000476342 PDSS2Q86YH6 399 aa28.02■■■□□ 2.08
HOXB3-208ENST00000476342 AMER3Q8N944 861 aa28.02■■■□□ 2.08
HOXB3-208ENST00000476342 MID1IP1Q9NPA3 183 aa28.02■■■□□ 2.08
HOXB3-208ENST00000476342 MKKSQ9NPJ1 570 aaPredicted RBP28.02■■■□□ 2.08
HOXB3-208ENST00000476342 DMRT3Q9NQL9 472 aa28.02■■■□□ 2.08
HOXB3-208ENST00000476342 TRPC4Q9UBN4 977 aa28.02■■■□□ 2.08
HOXB3-208ENST00000476342 CTSFQ9UBX1 484 aa28.02■■■□□ 2.08
HOXB3-208ENST00000476342 CCDC88CQ9P219 2028 aa28.02■■■□□ 2.08
HOXB3-208ENST00000476342 FFAR3O14843 346 aa28.01■■■□□ 2.08
HOXB3-208ENST00000476342 GPR42O15529 346 aa28.01■■■□□ 2.08
HOXB3-208ENST00000476342 ESRRBO95718 433 aa28.01■■■□□ 2.08
HOXB3-208ENST00000476342 TGFB1P01137 390 aa28.01■■■□□ 2.08
HOXB3-208ENST00000476342 BPGMP07738 259 aa28.01■■■□□ 2.08
HOXB3-208ENST00000476342 SMIM10L1P0DMW3 83 aa28.01■■■□□ 2.08
HOXB3-208ENST00000476342 CXADRP78310 365 aa28.01■■■□□ 2.08
HOXB3-208ENST00000476342 NKG7Q16617 165 aa28.01■■■□□ 2.08
HOXB3-208ENST00000476342 CRTC2Q53ET0 693 aaPredicted RBP28.01■■■□□ 2.08
HOXB3-208ENST00000476342 TMEM35AQ53FP2 167 aa28.01■■■□□ 2.08
HOXB3-208ENST00000476342 AGAP11Q8TF27 550 aa28.01■■■□□ 2.08
HOXB3-208ENST00000476342 SMIM10Q96HG1 83 aa28.01■■■□□ 2.08
HOXB3-208ENST00000476342 CNDP1Q96KN2 507 aa28.01■■■□□ 2.08
HOXB3-208ENST00000476342 TRMOQ9BU70 441 aa28.01■■■□□ 2.08
HOXB3-208ENST00000476342 GATA5Q9BWX5 397 aaPredicted RBP28.01■■■□□ 2.08
HOXB3-208ENST00000476342 AICDAQ9GZX7 198 aa28.01■■■□□ 2.08
HOXB3-208ENST00000476342 PTRH2Q9Y3E5 179 aaKnown RBP28.01■■■□□ 2.08
HOXB3-208ENST00000476342 EPG5Q9HCE0 2579 aa28.01■■■□□ 2.07
HOXB3-208ENST00000476342 IGLV3-12A0A075B6K2 115 aa28.01■■■□□ 2.07
HOXB3-208ENST00000476342 FOXE1O00358 373 aaPredicted RBP28.01■■■□□ 2.07
HOXB3-208ENST00000476342 RDH16O75452 317 aa28.01■■■□□ 2.07
HOXB3-208ENST00000476342 RECKO95980 971 aa28.01■■■□□ 2.07
HOXB3-208ENST00000476342 ENO1P06733 434 aaKnown RBP28.01■■■□□ 2.07
HOXB3-208ENST00000476342 FOLR3P41439 243 aa28.01■■■□□ 2.07
HOXB3-208ENST00000476342 SERPINB4P48594 390 aa28.01■■■□□ 2.07
HOXB3-208ENST00000476342 CDYL2Q8N8U2 506 aa28.01■■■□□ 2.07
HOXB3-208ENST00000476342 OR2Y1Q8NGV0 311 aa28.01■■■□□ 2.07
HOXB3-208ENST00000476342 F2RL3Q96RI0 385 aa28.01■■■□□ 2.07
HOXB3-208ENST00000476342 SLC29A3Q9BZD2 475 aa28.01■■■□□ 2.07
HOXB3-208ENST00000476342 CLK4Q9HAZ1 481 aaKnown RBP28.01■■■□□ 2.07
HOXB3-208ENST00000476342 C14orf105Q9NVL8 296 aa28.01■■■□□ 2.07
HOXB3-208ENST00000476342 PSD3Q9NYI0 1048 aa28.01■■■□□ 2.07
HOXB3-208ENST00000476342 PPT2Q9UMR5 302 aa28.01■■■□□ 2.07
HOXB3-208ENST00000476342 PKD1L2Q7Z442 2459 aa28■■■□□ 2.07
HOXB3-208ENST00000476342 MAGEB17A8MXT2 336 aa28■■■□□ 2.07
HOXB3-208ENST00000476342 KLF7O75840 302 aaPredicted RBP28■■■□□ 2.07
HOXB3-208ENST00000476342 PTX3P26022 381 aaPredicted RBP28■■■□□ 2.07
HOXB3-208ENST00000476342 HMOX2P30519 316 aa28■■■□□ 2.07
HOXB3-208ENST00000476342 PLA2G16P53816 162 aa28■■■□□ 2.07
HOXB3-208ENST00000476342 KHDRBS2Q5VWX1 349 aaKnown RBP28■■■□□ 2.07
HOXB3-208ENST00000476342 NUDCD3Q8IVD9 361 aa28■■■□□ 2.07
HOXB3-208ENST00000476342 STT3BQ8TCJ2 826 aa28■■■□□ 2.07
HOXB3-208ENST00000476342 MIEF2Q96C03 454 aa28■■■□□ 2.07
HOXB3-208ENST00000476342 KCNC2Q96PR1 638 aa28■■■□□ 2.07
HOXB3-208ENST00000476342 ACBD3Q9H3P7 528 aa28■■■□□ 2.07
HOXB3-208ENST00000476342 COPS7BQ9H9Q2 264 aaPredicted RBP28■■■□□ 2.07
HOXB3-208ENST00000476342 TMEM120BA0PK00 339 aa27.99■■■□□ 2.07
HOXB3-208ENST00000476342 ZNF860A6NHJ4 632 aa27.99■■■□□ 2.07
HOXB3-208ENST00000476342 C4orf51C9J302 202 aa27.99■■■□□ 2.07
HOXB3-208ENST00000476342 CNOT3O75175 753 aaKnown RBP27.99■■■□□ 2.07
HOXB3-208ENST00000476342 KRT6AP02538 564 aa27.99■■■□□ 2.07
HOXB3-208ENST00000476342 KRT6BP04259 564 aa27.99■■■□□ 2.07
HOXB3-208ENST00000476342 KRT6CP48668 564 aa27.99■■■□□ 2.07
HOXB3-208ENST00000476342 NEK2P51955 445 aa27.99■■■□□ 2.07
HOXB3-208ENST00000476342 RPS13P62277 151 aaKnown RBP27.99■■■□□ 2.07
HOXB3-208ENST00000476342 MAT1AQ00266 395 aaKnown RBP27.99■■■□□ 2.07
HOXB3-208ENST00000476342 SYT16Q17RD7 645 aa27.99■■■□□ 2.07
HOXB3-208ENST00000476342 DEPDC1Q5TB30 811 aa27.99■■■□□ 2.07
HOXB3-208ENST00000476342 ABHD17CQ6PCB6 329 aa27.99■■■□□ 2.07
HOXB3-208ENST00000476342 RNF175Q8N4F7 328 aa27.99■■■□□ 2.07
HOXB3-208ENST00000476342 METTL6Q8TCB7 284 aa27.99■■■□□ 2.07
HOXB3-208ENST00000476342 SELENOMQ8WWX9 145 aa27.99■■■□□ 2.07
HOXB3-208ENST00000476342 ARL8AQ96BM9 186 aa27.99■■■□□ 2.07
HOXB3-208ENST00000476342 MTFMTQ96DP5 389 aaKnown RBP27.99■■■□□ 2.07
HOXB3-208ENST00000476342 SPSB2Q99619 263 aa27.99■■■□□ 2.07
HOXB3-208ENST00000476342 SH3GL2Q99962 352 aa27.99■■■□□ 2.07
HOXB3-208ENST00000476342 ROGDIQ9GZN7 287 aa27.99■■■□□ 2.07
HOXB3-208ENST00000476342 HCN3Q9P1Z3 774 aa27.99■■■□□ 2.07
HOXB3-208ENST00000476342 VSTM2BA6NLU5 285 aa27.98■■■□□ 2.07
HOXB3-208ENST00000476342 BIRC5O15392 142 aa27.98■■■□□ 2.07
HOXB3-208ENST00000476342 NPHS1O60500 1241 aa27.98■■■□□ 2.07
HOXB3-208ENST00000476342 ZGLP1P0C6A0 271 aa27.98■■■□□ 2.07
HOXB3-208ENST00000476342 RAP1GDS1P52306 607 aa27.98■■■□□ 2.07
HOXB3-208ENST00000476342 BTN3A2P78410 334 aa27.98■■■□□ 2.07
HOXB3-208ENST00000476342 ERV3-1Q14264 604 aa27.98■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms