RNA–Protein interactions for RNA: ENST00000475772.5

CALD1-217, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 753 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-217ENST00000475772 AGGF1Q8N302 714 aaeCLIP9.8□□□□□ -0.84
CALD1-217ENST00000475772 OTUD6BQ8N6M0 293 aa9.8□□□□□ -0.84
CALD1-217ENST00000475772 METTL21AQ8WXB1 218 aa9.8□□□□□ -0.84
CALD1-217ENST00000475772 TSLPQ969D9 159 aa9.8□□□□□ -0.84
CALD1-217ENST00000475772 DMRTA2Q96SC8 542 aa9.8□□□□□ -0.84
CALD1-217ENST00000475772 TREX2Q9BQ50 279 aaPredicted RBP9.8□□□□□ -0.84
CALD1-217ENST00000475772 ENKD1Q9H0I2 346 aa9.8□□□□□ -0.84
CALD1-217ENST00000475772 CDCP1Q9H5V8 836 aa9.8□□□□□ -0.84
CALD1-217ENST00000475772 FBXO6Q9NRD1 293 aaPredicted RBP9.8□□□□□ -0.84
CALD1-217ENST00000475772 UTP6Q9NYH9 597 aaKnown RBP9.8□□□□□ -0.84
CALD1-217ENST00000475772 TEKT2Q9UIF3 430 aa9.8□□□□□ -0.84
CALD1-217ENST00000475772 ZCWPW2A0A1B0GU75 182 aa9.79□□□□□ -0.84
CALD1-217ENST00000475772 GABRR3A8MPY1 467 aa9.79□□□□□ -0.84
CALD1-217ENST00000475772 E5RI56 91 aa9.79□□□□□ -0.84
CALD1-217ENST00000475772 FAM227AF5H4B4 570 aa9.79□□□□□ -0.84
CALD1-217ENST00000475772 AP3B1O00203 1094 aa9.79□□□□□ -0.84
CALD1-217ENST00000475772 ZBTB14O43829 449 aa9.79□□□□□ -0.84
CALD1-217ENST00000475772 RDH16O75452 317 aa9.79□□□□□ -0.84
CALD1-217ENST00000475772 HAUS5O94927 633 aa9.79□□□□□ -0.84
CALD1-217ENST00000475772 SP1P08047 785 aa9.79□□□□□ -0.84
CALD1-217ENST00000475772 AGTR2P50052 363 aa9.79□□□□□ -0.84
CALD1-217ENST00000475772 SMSP52788 366 aa9.79□□□□□ -0.84
CALD1-217ENST00000475772 TERF1P54274 439 aa9.79□□□□□ -0.84
CALD1-217ENST00000475772 RPS15AP62244 130 aaKnown RBP9.79□□□□□ -0.84
CALD1-217ENST00000475772 SFT2D3Q587I9 215 aa9.79□□□□□ -0.84
CALD1-217ENST00000475772 MFSD4BQ5TF39 518 aa9.79□□□□□ -0.84
CALD1-217ENST00000475772 SLC25A25Q6KCM7 469 aa9.79□□□□□ -0.84
CALD1-217ENST00000475772 PAPD4Q6PIY7 484 aaKnown RBP9.79□□□□□ -0.84
CALD1-217ENST00000475772 C4orf22Q6V702 233 aa9.79□□□□□ -0.84
CALD1-217ENST00000475772 KIF2BQ8N4N8 673 aa9.79□□□□□ -0.84
CALD1-217ENST00000475772 OR5T3Q8NGG3 340 aa9.79□□□□□ -0.84
CALD1-217ENST00000475772 CD200R1Q8TD46 325 aa9.79□□□□□ -0.84
CALD1-217ENST00000475772 ELP5Q8TE02 316 aa9.79□□□□□ -0.84
CALD1-217ENST00000475772 C14orf79Q96F83 325 aa9.79□□□□□ -0.84
CALD1-217ENST00000475772 PEX11GQ96HA9 241 aa9.79□□□□□ -0.84
CALD1-217ENST00000475772 GPR21Q99679 349 aa9.79□□□□□ -0.84
CALD1-217ENST00000475772 UTP23Q9BRU9 249 aaKnown RBP9.79□□□□□ -0.84
CALD1-217ENST00000475772 MRPL18Q9H0U6 180 aaKnown RBP9.79□□□□□ -0.84
CALD1-217ENST00000475772 FAM114A2Q9NRY5 505 aa9.79□□□□□ -0.84
CALD1-217ENST00000475772 INTS10Q9NVR2 710 aaKnown RBP9.79□□□□□ -0.84
CALD1-217ENST00000475772 KLHL42Q9P2K6 505 aa9.79□□□□□ -0.84
CALD1-217ENST00000475772 ADAMTS6Q9UKP5 1117 aa9.79□□□□□ -0.84
CALD1-217ENST00000475772 GUCA1BQ9UMX6 200 aa9.79□□□□□ -0.84
CALD1-217ENST00000475772 ITPR3Q14573 2671 aa9.79□□□□□ -0.84
CALD1-217ENST00000475772 FAM237BA0A1B0GVD1 139 aa9.78□□□□□ -0.84
CALD1-217ENST00000475772 CTAGE15A4D2H0 777 aa9.78□□□□□ -0.84
CALD1-217ENST00000475772 ZNF839A8K0R7 811 aa9.78□□□□□ -0.84
CALD1-217ENST00000475772 KIF5CO60282 957 aa9.78□□□□□ -0.84
CALD1-217ENST00000475772 ADAM11O75078 769 aa9.78□□□□□ -0.84
CALD1-217ENST00000475772 CDC123O75794 336 aaPredicted RBP9.78□□□□□ -0.84
CALD1-217ENST00000475772 B3GALT4O96024 378 aa9.78□□□□□ -0.84
CALD1-217ENST00000475772 NPPBP16860 134 aa9.78□□□□□ -0.84
CALD1-217ENST00000475772 EEF1DP29692 281 aaKnown RBP9.78□□□□□ -0.84
CALD1-217ENST00000475772 SSTR2P30874 369 aa9.78□□□□□ -0.84
CALD1-217ENST00000475772 MAGEA6P43360 314 aa9.78□□□□□ -0.84
CALD1-217ENST00000475772 NR0B1P51843 470 aaKnown RBP9.78□□□□□ -0.84
CALD1-217ENST00000475772 CASP6P55212 293 aa9.78□□□□□ -0.84
CALD1-217ENST00000475772 SLC26A5P58743 744 aa9.78□□□□□ -0.84
CALD1-217ENST00000475772 TBPL1P62380 186 aa9.78□□□□□ -0.84
CALD1-217ENST00000475772 CDK16Q00536 496 aa9.78□□□□□ -0.84
CALD1-217ENST00000475772 DHX34Q14147 1143 aaKnown RBP9.78□□□□□ -0.84
CALD1-217ENST00000475772 USP10Q14694 798 aaKnown RBP9.78□□□□□ -0.84
CALD1-217ENST00000475772 TRIP13Q15645 432 aaPredicted RBP9.78□□□□□ -0.84
CALD1-217ENST00000475772 EXT1Q16394 746 aa9.78□□□□□ -0.84
CALD1-217ENST00000475772 THEMIS2Q5TEJ8 643 aa9.78□□□□□ -0.84
CALD1-217ENST00000475772 C3P1Q6ZMU1 363 aa9.78□□□□□ -0.84
CALD1-217ENST00000475772 MBOAT1Q6ZNC8 495 aa9.78□□□□□ -0.84
CALD1-217ENST00000475772 UBE2R2Q712K3 238 aaPredicted RBP9.78□□□□□ -0.84
CALD1-217ENST00000475772 PIWIL4Q7Z3Z4 852 aaKnown RBP9.78□□□□□ -0.84
CALD1-217ENST00000475772 CTAGE6Q86UF2 777 aa9.78□□□□□ -0.84
CALD1-217ENST00000475772 GAS2L3Q86XJ1 694 aa9.78□□□□□ -0.84
CALD1-217ENST00000475772 CPNE9Q8IYJ1 553 aa9.78□□□□□ -0.84
CALD1-217ENST00000475772 AFAP1L2Q8N4X5 818 aa9.78□□□□□ -0.84
CALD1-217ENST00000475772 CPSF7Q8N684 471 aaKnown RBP9.78□□□□□ -0.84
CALD1-217ENST00000475772 ZCCHC10Q8TBK6 192 aa9.78□□□□□ -0.84
CALD1-217ENST00000475772 AGAP11Q8TF27 550 aa9.78□□□□□ -0.84
CALD1-217ENST00000475772 SLC13A3Q8WWT9 602 aa9.78□□□□□ -0.84
CALD1-217ENST00000475772 WFDC12Q8WWY7 111 aa9.78□□□□□ -0.84
CALD1-217ENST00000475772 KCNJ9Q92806 393 aa9.78□□□□□ -0.84
CALD1-217ENST00000475772 EBNA1BP2Q99848 306 aaKnown RBP9.78□□□□□ -0.84
CALD1-217ENST00000475772 ATG10Q9H0Y0 220 aa9.78□□□□□ -0.84
CALD1-217ENST00000475772 TRIM45Q9H8W5 580 aaPredicted RBP9.78□□□□□ -0.84
CALD1-217ENST00000475772 LRFN1Q9P244 771 aa9.78□□□□□ -0.84
CALD1-217ENST00000475772 C19orf25Q9UFG5 118 aaPredicted RBP9.78□□□□□ -0.84
CALD1-217ENST00000475772 PDE10AQ9Y233 779 aa9.78□□□□□ -0.84
CALD1-217ENST00000475772 NAALAD2Q9Y3Q0 740 aa9.78□□□□□ -0.84
CALD1-217ENST00000475772 NF1P21359 2839 aa9.77□□□□□ -0.85
CALD1-217ENST00000475772 ZNF860A6NHJ4 632 aa9.77□□□□□ -0.85
CALD1-217ENST00000475772 MAGEB17A8MXT2 336 aa9.77□□□□□ -0.85
CALD1-217ENST00000475772 PFDN6O15212 129 aa9.77□□□□□ -0.85
CALD1-217ENST00000475772 ENO3P13929 434 aaPredicted RBP9.77□□□□□ -0.85
CALD1-217ENST00000475772 HRH2P25021 359 aa9.77□□□□□ -0.85
CALD1-217ENST00000475772 TPP2P29144 1249 aaPredicted RBP9.77□□□□□ -0.85
CALD1-217ENST00000475772 BTG2P78543 158 aa9.77□□□□□ -0.85
CALD1-217ENST00000475772 ACTN3Q08043 901 aaPredicted RBP9.77□□□□□ -0.85
CALD1-217ENST00000475772 ABRAXAS2Q15018 415 aa9.77□□□□□ -0.85
CALD1-217ENST00000475772 NSDHLQ15738 373 aa9.77□□□□□ -0.85
CALD1-217ENST00000475772 MAPKAPK3Q16644 382 aa9.77□□□□□ -0.85
CALD1-217ENST00000475772 ZNF470Q6ECI4 717 aa9.77□□□□□ -0.85
CALD1-217ENST00000475772 CAPN13Q6MZZ7 669 aaPredicted RBP9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms