RNA–Protein interactions for RNA: ENST00000475329.5

TRAF4-210, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-210ENST00000475329 PDE7AQ13946 482 aa13.09□□□□□ -0.31
TRAF4-210ENST00000475329 DUOXA1Q1HG43 343 aa13.09□□□□□ -0.31
TRAF4-210ENST00000475329 ANXA8L1Q5VT79 327 aa13.09□□□□□ -0.31
TRAF4-210ENST00000475329 OR4C11Q6IEV9 310 aa13.09□□□□□ -0.31
TRAF4-210ENST00000475329 TRIM40Q6P9F5 258 aa13.09□□□□□ -0.31
TRAF4-210ENST00000475329 VN1R4Q7Z5H5 301 aa13.09□□□□□ -0.31
TRAF4-210ENST00000475329 UBE3DQ7Z6J8 389 aa13.09□□□□□ -0.31
TRAF4-210ENST00000475329 SLC15A3Q8IY34 581 aa13.09□□□□□ -0.31
TRAF4-210ENST00000475329 KIAA2013Q8IYS2 634 aa13.09□□□□□ -0.31
TRAF4-210ENST00000475329 SLC25A45Q8N413 288 aa13.09□□□□□ -0.31
TRAF4-210ENST00000475329 RNF148Q8N7C7 305 aa13.09□□□□□ -0.31
TRAF4-210ENST00000475329 OR2L5Q8NG80 312 aa13.09□□□□□ -0.31
TRAF4-210ENST00000475329 CEP76Q8TAP6 659 aa13.09□□□□□ -0.31
TRAF4-210ENST00000475329 DNAJB14Q8TBM8 379 aa13.09□□□□□ -0.31
TRAF4-210ENST00000475329 JADE3Q92613 823 aa13.09□□□□□ -0.31
TRAF4-210ENST00000475329 GAL3ST3Q96A11 431 aa13.09□□□□□ -0.31
TRAF4-210ENST00000475329 PPCDCQ96CD2 204 aa13.09□□□□□ -0.31
TRAF4-210ENST00000475329 COQ8BQ96D53 544 aa13.09□□□□□ -0.31
TRAF4-210ENST00000475329 PPM1MQ96MI6 270 aa13.09□□□□□ -0.31
TRAF4-210ENST00000475329 KCNC2Q96PR1 638 aa13.09□□□□□ -0.31
TRAF4-210ENST00000475329 CGREF1Q99674 301 aa13.09□□□□□ -0.31
TRAF4-210ENST00000475329 BHLHE41Q9C0J9 482 aaPredicted RBP13.09□□□□□ -0.31
TRAF4-210ENST00000475329 SLC6A16Q9GZN6 736 aa13.09□□□□□ -0.31
TRAF4-210ENST00000475329 AICDAQ9GZX7 198 aa13.09□□□□□ -0.31
TRAF4-210ENST00000475329 KLHL25Q9H0H3 589 aa13.09□□□□□ -0.31
TRAF4-210ENST00000475329 ABCG4Q9H172 646 aa13.09□□□□□ -0.31
TRAF4-210ENST00000475329 DDX31Q9H8H2 851 aaKnown RBP13.09□□□□□ -0.31
TRAF4-210ENST00000475329 CMTM6Q9NX76 183 aa13.09□□□□□ -0.31
TRAF4-210ENST00000475329 SLAMF8Q9P0V8 285 aa13.09□□□□□ -0.31
TRAF4-210ENST00000475329 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.09□□□□□ -0.31
TRAF4-210ENST00000475329 CD300AQ9UGN4 299 aa13.09□□□□□ -0.31
TRAF4-210ENST00000475329 BCAP29Q9UHQ4 241 aa13.09□□□□□ -0.31
TRAF4-210ENST00000475329 PILRAQ9UKJ1 303 aa13.09□□□□□ -0.31
TRAF4-210ENST00000475329 RNF215Q9Y6U7 377 aa13.09□□□□□ -0.31
TRAF4-210ENST00000475329 SDK1Q7Z5N4 2213 aa13.08□□□□□ -0.32
TRAF4-210ENST00000475329 A0A0A6YYD5 115 aa13.08□□□□□ -0.32
TRAF4-210ENST00000475329 A0A0J9YVX5 310 aa13.08□□□□□ -0.32
TRAF4-210ENST00000475329 A0A1B0GTQ1 180 aa13.08□□□□□ -0.32
TRAF4-210ENST00000475329 GABRR3A8MPY1 467 aa13.08□□□□□ -0.32
TRAF4-210ENST00000475329 MAP3K7O43318 606 aa13.08□□□□□ -0.32
TRAF4-210ENST00000475329 DFNA5O60443 496 aa13.08□□□□□ -0.32
TRAF4-210ENST00000475329 CTSVO60911 334 aa13.08□□□□□ -0.32
TRAF4-210ENST00000475329 FURINP09958 794 aa13.08□□□□□ -0.32
TRAF4-210ENST00000475329 SP9P0CG40 484 aa13.08□□□□□ -0.32
TRAF4-210ENST00000475329 LAMP1P11279 417 aa13.08□□□□□ -0.32
TRAF4-210ENST00000475329 PIM1P11309 404 aaPredicted RBP13.08□□□□□ -0.32
TRAF4-210ENST00000475329 HSD17B1P14061 328 aa13.08□□□□□ -0.32
TRAF4-210ENST00000475329 TSFMP43897 325 aaKnown RBP13.08□□□□□ -0.32
TRAF4-210ENST00000475329 TRPC1P48995 793 aa13.08□□□□□ -0.32
TRAF4-210ENST00000475329 PLA2G16P53816 162 aa13.08□□□□□ -0.32
TRAF4-210ENST00000475329 WNT3P56703 355 aa13.08□□□□□ -0.32
TRAF4-210ENST00000475329 LRRC74AQ0VAA2 488 aa13.08□□□□□ -0.32
TRAF4-210ENST00000475329 FLOT2Q14254 428 aa13.08□□□□□ -0.32
TRAF4-210ENST00000475329 SNCBQ16143 134 aa13.08□□□□□ -0.32
TRAF4-210ENST00000475329 LRIF1Q5T3J3 769 aa13.08□□□□□ -0.32
TRAF4-210ENST00000475329 ANKRD26P1Q6NSI1 321 aa13.08□□□□□ -0.32
TRAF4-210ENST00000475329 NANOGP8Q6NSW7 305 aa13.08□□□□□ -0.32
TRAF4-210ENST00000475329 IRGCQ6NXR0 463 aa13.08□□□□□ -0.32
TRAF4-210ENST00000475329 FBXO42Q6P3S6 717 aa13.08□□□□□ -0.32
TRAF4-210ENST00000475329 ABHD17CQ6PCB6 329 aa13.08□□□□□ -0.32
TRAF4-210ENST00000475329 DNAJC14Q6Y2X3 702 aaPredicted RBP13.08□□□□□ -0.32
TRAF4-210ENST00000475329 ZNF438Q7Z4V0 828 aa13.08□□□□□ -0.32
TRAF4-210ENST00000475329 BMP8AQ7Z5Y6 402 aa13.08□□□□□ -0.32
TRAF4-210ENST00000475329 ANKRD46Q86W74 232 aa13.08□□□□□ -0.32
TRAF4-210ENST00000475329 SLC35F3Q8IY50 421 aa13.08□□□□□ -0.32
TRAF4-210ENST00000475329 ZNF655Q8N720 491 aaPredicted RBP13.08□□□□□ -0.32
TRAF4-210ENST00000475329 C19orf47Q8N9M1 422 aaKnown RBP13.08□□□□□ -0.32
TRAF4-210ENST00000475329 CAMKVQ8NCB2 501 aa13.08□□□□□ -0.32
TRAF4-210ENST00000475329 OR8J3Q8NGG0 315 aa13.08□□□□□ -0.32
TRAF4-210ENST00000475329 RERGQ96A58 199 aaPredicted RBP13.08□□□□□ -0.32
TRAF4-210ENST00000475329 ASB9Q96DX5 294 aa13.08□□□□□ -0.32
TRAF4-210ENST00000475329 TM4SF19Q96DZ7 209 aa13.08□□□□□ -0.32
TRAF4-210ENST00000475329 TEFMQ96QE5 360 aaKnown RBP13.08□□□□□ -0.32
TRAF4-210ENST00000475329 OR2A5Q96R48 311 aa13.08□□□□□ -0.32
TRAF4-210ENST00000475329 MACROD1Q9BQ69 325 aa13.08□□□□□ -0.32
TRAF4-210ENST00000475329 TBCDQ9BTW9 1192 aa13.08□□□□□ -0.32
TRAF4-210ENST00000475329 PAIP1Q9H074 479 aaKnown RBP13.08□□□□□ -0.32
TRAF4-210ENST00000475329 EPB41L1Q9H4G0 881 aa13.08□□□□□ -0.32
TRAF4-210ENST00000475329 KLHL31Q9H511 634 aa13.08□□□□□ -0.32
TRAF4-210ENST00000475329 SYNPO2LQ9H987 977 aa13.08□□□□□ -0.32
TRAF4-210ENST00000475329 COPS7BQ9H9Q2 264 aaPredicted RBP13.08□□□□□ -0.32
TRAF4-210ENST00000475329 NANOGQ9H9S0 305 aa13.08□□□□□ -0.32
TRAF4-210ENST00000475329 SERHLQ9NQF3 203 aa13.08□□□□□ -0.32
TRAF4-210ENST00000475329 MIEF1Q9NQG6 463 aa13.08□□□□□ -0.32
TRAF4-210ENST00000475329 NLGN3Q9NZ94 848 aa13.08□□□□□ -0.32
TRAF4-210ENST00000475329 SH3BP4Q9P0V3 963 aa13.08□□□□□ -0.32
TRAF4-210ENST00000475329 EXO1Q9UQ84 846 aaKnown RBP13.08□□□□□ -0.32
TRAF4-210ENST00000475329 AP3M1Q9Y2T2 418 aa13.08□□□□□ -0.32
TRAF4-210ENST00000475329 ZDBF2Q9HCK1 2354 aa13.07□□□□□ -0.32
TRAF4-210ENST00000475329 SCN3AQ9NY46 2000 aa13.07□□□□□ -0.32
TRAF4-210ENST00000475329 A0A0G2JN53 185 aa13.07□□□□□ -0.32
TRAF4-210ENST00000475329 PRORSD1PA6NEY8 169 aa13.07□□□□□ -0.32
TRAF4-210ENST00000475329 URADA6NGE7 173 aa13.07□□□□□ -0.32
TRAF4-210ENST00000475329 C4orf51C9J302 202 aa13.07□□□□□ -0.32
TRAF4-210ENST00000475329 RFXANKO14593 260 aa13.07□□□□□ -0.32
TRAF4-210ENST00000475329 NUDT21O43809 227 aaKnown RBP13.07□□□□□ -0.32
TRAF4-210ENST00000475329 TMPRSS11DO60235 418 aa13.07□□□□□ -0.32
TRAF4-210ENST00000475329 DNAJA2O60884 412 aa13.07□□□□□ -0.32
TRAF4-210ENST00000475329 GUCY1B2O75343 617 aa13.07□□□□□ -0.32
TRAF4-210ENST00000475329 ANP32DO95626 131 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms