RNA–Protein interactions for RNA: ENST00000474825.1

ATG4A-207, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-207ENST00000474825 FAM13CQ8NE31 585 aa6.31□□□□□ -1.4
ATG4A-207ENST00000474825 SRFBP1Q8NEF9 429 aaKnown RBP6.31□□□□□ -1.4
ATG4A-207ENST00000474825 OR6C4Q8NGE1 309 aa6.31□□□□□ -1.4
ATG4A-207ENST00000474825 OR4C6Q8NH72 309 aa6.31□□□□□ -1.4
ATG4A-207ENST00000474825 JPH3Q8WXH2 748 aaPredicted RBP6.31□□□□□ -1.4
ATG4A-207ENST00000474825 GTF2H4Q92759 462 aa6.31□□□□□ -1.4
ATG4A-207ENST00000474825 RGMAQ96B86 450 aa6.31□□□□□ -1.4
ATG4A-207ENST00000474825 MS4A6EQ96DS6 147 aa6.31□□□□□ -1.4
ATG4A-207ENST00000474825 EGLN2Q96KS0 407 aa6.31□□□□□ -1.4
ATG4A-207ENST00000474825 QRFPRQ96P65 431 aa6.31□□□□□ -1.4
ATG4A-207ENST00000474825 CD180Q99467 661 aa6.31□□□□□ -1.4
ATG4A-207ENST00000474825 NPAS2Q99743 824 aa6.31□□□□□ -1.4
ATG4A-207ENST00000474825 DUSP23Q9BVJ7 150 aa6.31□□□□□ -1.4
ATG4A-207ENST00000474825 KRTAP4-8Q9BYQ9 185 aa6.31□□□□□ -1.4
ATG4A-207ENST00000474825 DPY30Q9C005 99 aa6.31□□□□□ -1.4
ATG4A-207ENST00000474825 ABCG4Q9H172 646 aa6.31□□□□□ -1.4
ATG4A-207ENST00000474825 SEMA6CQ9H3T2 930 aa6.31□□□□□ -1.4
ATG4A-207ENST00000474825 WDR41Q9HAD4 459 aa6.31□□□□□ -1.4
ATG4A-207ENST00000474825 SERHLQ9NQF3 203 aa6.31□□□□□ -1.4
ATG4A-207ENST00000474825 PRDM7Q9NQW5 492 aa6.31□□□□□ -1.4
ATG4A-207ENST00000474825 C1GALT1Q9NS00 363 aa6.31□□□□□ -1.4
ATG4A-207ENST00000474825 GID8Q9NWU2 228 aa6.31□□□□□ -1.4
ATG4A-207ENST00000474825 TAS2R7Q9NYW3 318 aa6.31□□□□□ -1.4
ATG4A-207ENST00000474825 NLGN3Q9NZ94 848 aa6.31□□□□□ -1.4
ATG4A-207ENST00000474825 BAIAP2L1Q9UHR4 511 aa6.31□□□□□ -1.4
ATG4A-207ENST00000474825 LEF1Q9UJU2 399 aaPredicted RBP6.31□□□□□ -1.4
ATG4A-207ENST00000474825 SLC6A14Q9UN76 642 aa6.31□□□□□ -1.4
ATG4A-207ENST00000474825 PCDHGA5Q9Y5G8 931 aa6.31□□□□□ -1.4
ATG4A-207ENST00000474825 FRYLO94915 3013 aa6.31□□□□□ -1.4
ATG4A-207ENST00000474825 GON4LQ3T8J9 2241 aa6.31□□□□□ -1.4
ATG4A-207ENST00000474825 PCM1Q15154 2024 aa6.3□□□□□ -1.4
ATG4A-207ENST00000474825 CACNA1HO95180 2353 aa6.3□□□□□ -1.4
ATG4A-207ENST00000474825 A0A0A6YYD5 115 aa6.3□□□□□ -1.4
ATG4A-207ENST00000474825 LY6G6EA0A0G2JKS1 128 aa6.3□□□□□ -1.4
ATG4A-207ENST00000474825 CCDC154A6NI56 674 aa6.3□□□□□ -1.4
ATG4A-207ENST00000474825 GABRR3A8MPY1 467 aa6.3□□□□□ -1.4
ATG4A-207ENST00000474825 NR5A2O00482 541 aa6.3□□□□□ -1.4
ATG4A-207ENST00000474825 ANGPT2O15123 496 aa6.3□□□□□ -1.4
ATG4A-207ENST00000474825 SCAMP2O15127 329 aaKnown RBP6.3□□□□□ -1.4
ATG4A-207ENST00000474825 NDUFS4O43181 175 aa6.3□□□□□ -1.4
ATG4A-207ENST00000474825 B4GAT1O43505 415 aa6.3□□□□□ -1.4
ATG4A-207ENST00000474825 PCDH7O60245 1069 aa6.3□□□□□ -1.4
ATG4A-207ENST00000474825 SRPX2O60687 465 aaPredicted RBP6.3□□□□□ -1.4
ATG4A-207ENST00000474825 ERN1O75460 977 aaKnown RBP6.3□□□□□ -1.4
ATG4A-207ENST00000474825 EPN2O95208 641 aa6.3□□□□□ -1.4
ATG4A-207ENST00000474825 C9P02748 559 aa6.3□□□□□ -1.4
ATG4A-207ENST00000474825 PGRP06401 933 aa6.3□□□□□ -1.4
ATG4A-207ENST00000474825 PROS1P07225 676 aa6.3□□□□□ -1.4
ATG4A-207ENST00000474825 ANXA4P09525 319 aaPredicted RBP6.3□□□□□ -1.4
ATG4A-207ENST00000474825 FURINP09958 794 aa6.3□□□□□ -1.4
ATG4A-207ENST00000474825 CCNYL3P0C7X3 344 aa6.3□□□□□ -1.4
ATG4A-207ENST00000474825 MSL3P1P0C860 447 aa6.3□□□□□ -1.4
ATG4A-207ENST00000474825 ZNF883P0CG24 379 aa6.3□□□□□ -1.4
ATG4A-207ENST00000474825 MAGP20916 626 aa6.3□□□□□ -1.4
ATG4A-207ENST00000474825 SLC6A2P23975 617 aa6.3□□□□□ -1.4
ATG4A-207ENST00000474825 HNRNPH1P31943 449 aaKnown RBP6.3□□□□□ -1.4
ATG4A-207ENST00000474825 RPL3P39023 403 aaKnown RBP6.3□□□□□ -1.4
ATG4A-207ENST00000474825 FRKP42685 505 aaPredicted RBP6.3□□□□□ -1.4
ATG4A-207ENST00000474825 TRPC1P48995 793 aa6.3□□□□□ -1.4
ATG4A-207ENST00000474825 NUDT2P50583 147 aa6.3□□□□□ -1.4
ATG4A-207ENST00000474825 PSME3P61289 254 aa6.3□□□□□ -1.4
ATG4A-207ENST00000474825 ZNF763Q0D2J5 394 aa6.3□□□□□ -1.4
ATG4A-207ENST00000474825 LRRC74AQ0VAA2 488 aa6.3□□□□□ -1.4
ATG4A-207ENST00000474825 ART3Q13508 389 aa6.3□□□□□ -1.4
ATG4A-207ENST00000474825 DDX39BQ13838 428 aaKnown RBP6.3□□□□□ -1.4
ATG4A-207ENST00000474825 TCEA2Q15560 299 aa6.3□□□□□ -1.4
ATG4A-207ENST00000474825 HLA-BQ31612 363 aa6.3□□□□□ -1.4
ATG4A-207ENST00000474825 TRMT5Q32P41 509 aaKnown RBP6.3□□□□□ -1.4
ATG4A-207ENST00000474825 SPANXN4Q5MJ08 99 aa6.3□□□□□ -1.4
ATG4A-207ENST00000474825 WASHC2DQ5SRD0 308 aa6.3□□□□□ -1.4
ATG4A-207ENST00000474825 ZNF385CQ66K41 422 aaPredicted RBP6.3□□□□□ -1.4
ATG4A-207ENST00000474825 OR4C11Q6IEV9 310 aa6.3□□□□□ -1.4
ATG4A-207ENST00000474825 ZCCHC8Q6NZY4 707 aaKnown RBP6.3□□□□□ -1.4
ATG4A-207ENST00000474825 BNC2Q6ZN30 1099 aaPredicted RBP6.3□□□□□ -1.4
ATG4A-207ENST00000474825 ASCL5Q7RTU5 278 aa6.3□□□□□ -1.4
ATG4A-207ENST00000474825 PAGE2Q7Z2X7 111 aa6.3□□□□□ -1.4
ATG4A-207ENST00000474825 ASPGQ86U10 573 aa6.3□□□□□ -1.4
ATG4A-207ENST00000474825 PLD3Q8IV08 490 aa6.3□□□□□ -1.4
ATG4A-207ENST00000474825 SCUBE1Q8IWY4 988 aa6.3□□□□□ -1.4
ATG4A-207ENST00000474825 ULK2Q8IYT8 1036 aa6.3□□□□□ -1.4
ATG4A-207ENST00000474825 DEFB107AQ8IZN7 70 aa6.3□□□□□ -1.4
ATG4A-207ENST00000474825 FBXW8Q8N3Y1 598 aa6.3□□□□□ -1.4
ATG4A-207ENST00000474825 ZCCHC7Q8N3Z6 543 aaKnown RBP6.3□□□□□ -1.4
ATG4A-207ENST00000474825 DNAJC22Q8N4W6 341 aa6.3□□□□□ -1.4
ATG4A-207ENST00000474825 KRTCAP2Q8N6L1 136 aa6.3□□□□□ -1.4
ATG4A-207ENST00000474825 NATD1Q8N6N6 113 aa6.3□□□□□ -1.4
ATG4A-207ENST00000474825 CAMKVQ8NCB2 501 aa6.3□□□□□ -1.4
ATG4A-207ENST00000474825 OR2L5Q8NG80 312 aa6.3□□□□□ -1.4
ATG4A-207ENST00000474825 GOT1L1Q8NHS2 421 aaPredicted RBP6.3□□□□□ -1.4
ATG4A-207ENST00000474825 WDR48Q8TAF3 677 aa6.3□□□□□ -1.4
ATG4A-207ENST00000474825 C16orf78Q8WTQ4 265 aa6.3□□□□□ -1.4
ATG4A-207ENST00000474825 SLC13A3Q8WWT9 602 aa6.3□□□□□ -1.4
ATG4A-207ENST00000474825 PIGKQ92643 395 aa6.3□□□□□ -1.4
ATG4A-207ENST00000474825 VPS33AQ96AX1 596 aa6.3□□□□□ -1.4
ATG4A-207ENST00000474825 TM4SF18Q96CE8 201 aa6.3□□□□□ -1.4
ATG4A-207ENST00000474825 LRRC58Q96CX6 371 aa6.3□□□□□ -1.4
ATG4A-207ENST00000474825 SLC45A3Q96JT2 553 aa6.3□□□□□ -1.4
ATG4A-207ENST00000474825 CNTNAP3BQ96NU0 1288 aa6.3□□□□□ -1.4
ATG4A-207ENST00000474825 TSSK3Q96PN8 268 aa6.3□□□□□ -1.4
ATG4A-207ENST00000474825 TRAPPC9Q96Q05 1148 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms