RNA–Protein interactions for RNA: ENST00000474056.5

UPF3A-203, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3A, Length 748 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-203ENST00000474056 SUPT3HO75486 399 aa16.89■□□□□ 0.29
UPF3A-203ENST00000474056 WFS1O76024 890 aa16.89■□□□□ 0.29
UPF3A-203ENST00000474056 S100BP04271 92 aaPredicted RBP16.89■□□□□ 0.29
UPF3A-203ENST00000474056 TUBB4AP04350 444 aa16.89■□□□□ 0.29
UPF3A-203ENST00000474056 EPORP19235 508 aa16.89■□□□□ 0.29
UPF3A-203ENST00000474056 CD22P20273 847 aa16.89■□□□□ 0.29
UPF3A-203ENST00000474056 IL10P22301 178 aa16.89■□□□□ 0.29
UPF3A-203ENST00000474056 HNRNPH1P31943 449 aaKnown RBP16.89■□□□□ 0.29
UPF3A-203ENST00000474056 AGTR2P50052 363 aa16.89■□□□□ 0.29
UPF3A-203ENST00000474056 ABRAXAS2Q15018 415 aa16.89■□□□□ 0.29
UPF3A-203ENST00000474056 PDK4Q16654 411 aa16.89■□□□□ 0.29
UPF3A-203ENST00000474056 NIPAL1Q6NVV3 410 aa16.89■□□□□ 0.29
UPF3A-203ENST00000474056 KRT78Q8N1N4 520 aa16.89■□□□□ 0.29
UPF3A-203ENST00000474056 CATSPER1Q8NEC5 780 aa16.89■□□□□ 0.29
UPF3A-203ENST00000474056 TTLQ8NG68 377 aa16.89■□□□□ 0.29
UPF3A-203ENST00000474056 CCT6BQ92526 530 aa16.89■□□□□ 0.29
UPF3A-203ENST00000474056 TBC1D20Q96BZ9 403 aa16.89■□□□□ 0.29
UPF3A-203ENST00000474056 CAPS2Q9BXY5 557 aa16.89■□□□□ 0.29
UPF3A-203ENST00000474056 EHD1Q9H4M9 534 aa16.89■□□□□ 0.29
UPF3A-203ENST00000474056 A0A0G2JN53 185 aa16.88■□□□□ 0.29
UPF3A-203ENST00000474056 ACSL3O95573 720 aa16.88■□□□□ 0.29
UPF3A-203ENST00000474056 TBX6O95947 436 aaPredicted RBP16.88■□□□□ 0.29
UPF3A-203ENST00000474056 C2P06681 752 aa16.88■□□□□ 0.29
UPF3A-203ENST00000474056 UQCRHP07919 91 aa16.88■□□□□ 0.29
UPF3A-203ENST00000474056 ICAM2P13598 275 aa16.88■□□□□ 0.29
UPF3A-203ENST00000474056 MRPL49Q13405 166 aaKnown RBP16.88■□□□□ 0.29
UPF3A-203ENST00000474056 UBAP2LQ14157 1087 aaKnown RBP16.88■□□□□ 0.29
UPF3A-203ENST00000474056 DOC2AQ14183 400 aa16.88■□□□□ 0.29
UPF3A-203ENST00000474056 ZNF169Q14929 603 aaPredicted RBP16.88■□□□□ 0.29
UPF3A-203ENST00000474056 NSDHLQ15738 373 aa16.88■□□□□ 0.29
UPF3A-203ENST00000474056 BTBD16Q32M84 506 aa16.88■□□□□ 0.29
UPF3A-203ENST00000474056 GLE1Q53GS7 698 aaKnown RBP16.88■□□□□ 0.29
UPF3A-203ENST00000474056 SFT2D3Q587I9 215 aa16.88■□□□□ 0.29
UPF3A-203ENST00000474056 XKR6Q5GH73 641 aa16.88■□□□□ 0.29
UPF3A-203ENST00000474056 ADNP2Q6IQ32 1131 aa16.88■□□□□ 0.29
UPF3A-203ENST00000474056 CEP128Q6ZU80 1094 aa16.88■□□□□ 0.29
UPF3A-203ENST00000474056 LRRC70Q7Z2Q7 622 aa16.88■□□□□ 0.29
UPF3A-203ENST00000474056 VN1R5Q7Z5H4 357 aa16.88■□□□□ 0.29
UPF3A-203ENST00000474056 GAL3ST3Q96A11 431 aa16.88■□□□□ 0.29
UPF3A-203ENST00000474056 PTCD3Q96EY7 689 aaKnown RBP16.88■□□□□ 0.29
UPF3A-203ENST00000474056 FMO2Q99518 471 aa16.88■□□□□ 0.29
UPF3A-203ENST00000474056 FUT8Q9BYC5 575 aa16.88■□□□□ 0.29
UPF3A-203ENST00000474056 SLC29A3Q9BZD2 475 aa16.88■□□□□ 0.29
UPF3A-203ENST00000474056 CD244Q9BZW8 370 aa16.88■□□□□ 0.29
UPF3A-203ENST00000474056 NT5DC2Q9H857 520 aa16.88■□□□□ 0.29
UPF3A-203ENST00000474056 PLA2G3Q9NZ20 509 aa16.88■□□□□ 0.29
UPF3A-203ENST00000474056 ACOT9Q9Y305 439 aa16.88■□□□□ 0.29
UPF3A-203ENST00000474056 SETXQ7Z333 2677 aaKnown RBP16.88■□□□□ 0.29
UPF3A-203ENST00000474056 LRRK2Q5S007 2527 aa16.88■□□□□ 0.29
UPF3A-203ENST00000474056 USP9XQ93008 2570 aaPredicted RBP16.87■□□□□ 0.29
UPF3A-203ENST00000474056 A0A087X1B8 175 aa16.87■□□□□ 0.29
UPF3A-203ENST00000474056 MAGEB17A8MXT2 336 aa16.87■□□□□ 0.29
UPF3A-203ENST00000474056 B4GALT2O60909 372 aa16.87■□□□□ 0.29
UPF3A-203ENST00000474056 F10P00742 488 aa16.87■□□□□ 0.29
UPF3A-203ENST00000474056 ALDOAP04075 364 aaKnown RBP16.87■□□□□ 0.29
UPF3A-203ENST00000474056 MTHFD2P13995 350 aa16.87■□□□□ 0.29
UPF3A-203ENST00000474056 TSFMP43897 325 aaKnown RBP16.87■□□□□ 0.29
UPF3A-203ENST00000474056 STXBP1P61764 594 aaKnown RBP16.87■□□□□ 0.29
UPF3A-203ENST00000474056 ARG2P78540 354 aa16.87■□□□□ 0.29
UPF3A-203ENST00000474056 BTG2P78543 158 aa16.87■□□□□ 0.29
UPF3A-203ENST00000474056 NR6A1Q15406 480 aa16.87■□□□□ 0.29
UPF3A-203ENST00000474056 PLAG1Q6DJT9 500 aa16.87■□□□□ 0.29
UPF3A-203ENST00000474056 PAPD4Q6PIY7 484 aaKnown RBP16.87■□□□□ 0.29
UPF3A-203ENST00000474056 CA13Q8N1Q1 262 aa16.87■□□□□ 0.29
UPF3A-203ENST00000474056 FAM26EQ8N5C1 309 aa16.87■□□□□ 0.29
UPF3A-203ENST00000474056 KIF18AQ8NI77 898 aa16.87■□□□□ 0.29
UPF3A-203ENST00000474056 UBTD2Q8WUN7 234 aa16.87■□□□□ 0.29
UPF3A-203ENST00000474056 MS4A6EQ96DS6 147 aa16.87■□□□□ 0.29
UPF3A-203ENST00000474056 WDR34Q96EX3 536 aa16.87■□□□□ 0.29
UPF3A-203ENST00000474056 PITHD1Q9GZP4 211 aaPredicted RBP16.87■□□□□ 0.29
UPF3A-203ENST00000474056 RHBGQ9H310 441 aa16.87■□□□□ 0.29
UPF3A-203ENST00000474056 ZNF490Q9ULM2 529 aaPredicted RBP16.87■□□□□ 0.29
UPF3A-203ENST00000474056 COPG1Q9Y678 874 aaKnown RBP16.87■□□□□ 0.29
UPF3A-203ENST00000474056 COL12A1Q99715 3063 aa16.87■□□□□ 0.29
UPF3A-203ENST00000474056 HECTD1Q9ULT8 2610 aa16.86■□□□□ 0.29
UPF3A-203ENST00000474056 A0A096LPK6 155 aa16.86■□□□□ 0.29
UPF3A-203ENST00000474056 DYTNA2CJ06 578 aa16.86■□□□□ 0.29
UPF3A-203ENST00000474056 LRIT2A6NDA9 550 aa16.86■□□□□ 0.29
UPF3A-203ENST00000474056 ANKDD1BA6NHY2 528 aa16.86■□□□□ 0.29
UPF3A-203ENST00000474056 ERI3O43414 337 aaKnown RBP16.86■□□□□ 0.29
UPF3A-203ENST00000474056 CLEC3AO75596 197 aa16.86■□□□□ 0.29
UPF3A-203ENST00000474056 RNH1P13489 461 aaKnown RBP16.86■□□□□ 0.29
UPF3A-203ENST00000474056 JAK1P23458 1154 aa16.86■□□□□ 0.29
UPF3A-203ENST00000474056 GSTM2P28161 218 aa16.86■□□□□ 0.29
UPF3A-203ENST00000474056 SERPINB8P50452 374 aa16.86■□□□□ 0.29
UPF3A-203ENST00000474056 AP2B1P63010 937 aa16.86■□□□□ 0.29
UPF3A-203ENST00000474056 BTN3A2P78410 334 aa16.86■□□□□ 0.29
UPF3A-203ENST00000474056 IRF8Q02556 426 aa16.86■□□□□ 0.29
UPF3A-203ENST00000474056 CHIT1Q13231 466 aa16.86■□□□□ 0.29
UPF3A-203ENST00000474056 TLR1Q15399 786 aa16.86■□□□□ 0.29
UPF3A-203ENST00000474056 QSOX2Q6ZRP7 698 aa16.86■□□□□ 0.29
UPF3A-203ENST00000474056 SLC44A1Q8WWI5 657 aa16.86■□□□□ 0.29
UPF3A-203ENST00000474056 MAGEB10Q96LZ2 347 aaPredicted RBP16.86■□□□□ 0.29
UPF3A-203ENST00000474056 TSPYL1Q9H0U9 437 aa16.86■□□□□ 0.29
UPF3A-203ENST00000474056 CLK4Q9HAZ1 481 aaKnown RBP16.86■□□□□ 0.29
UPF3A-203ENST00000474056 ICE1Q9Y2F5 2266 aa16.86■□□□□ 0.29
UPF3A-203ENST00000474056 POLEQ07864 2286 aa16.85■□□□□ 0.29
UPF3A-203ENST00000474056 FAM227AF5H4B4 570 aa16.85■□□□□ 0.29
UPF3A-203ENST00000474056 KLHL2O95198 593 aa16.85■□□□□ 0.29
UPF3A-203ENST00000474056 WDPCPO95876 746 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms