RNA–Protein interactions for RNA: ENST00000474048.1

PRPF38A-202, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 1 (best)

Gene PRPF38A, Length 1,059 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-202ENST00000474048 E2F1Q01094 437 aa9.79□□□□□ -0.84
PRPF38A-202ENST00000474048 TRA2AQ13595 282 aaKnown RBP eCLIP9.79□□□□□ -0.84
PRPF38A-202ENST00000474048 GRM7Q14831 915 aa9.79□□□□□ -0.84
PRPF38A-202ENST00000474048 HKDC1Q2TB90 917 aa9.79□□□□□ -0.84
PRPF38A-202ENST00000474048 FAM214AQ32MH5 1076 aa9.79□□□□□ -0.84
PRPF38A-202ENST00000474048 PGS1Q32NB8 556 aa9.79□□□□□ -0.84
PRPF38A-202ENST00000474048 WASHC2DQ5SRD0 308 aa9.79□□□□□ -0.84
PRPF38A-202ENST00000474048 FAM219BQ5XKK7 198 aa9.79□□□□□ -0.84
PRPF38A-202ENST00000474048 PAOXQ6QHF9 649 aa9.79□□□□□ -0.84
PRPF38A-202ENST00000474048 C16orf89Q6UX73 402 aa9.79□□□□□ -0.84
PRPF38A-202ENST00000474048 GK5Q6ZS86 529 aa9.79□□□□□ -0.84
PRPF38A-202ENST00000474048 YTHDF3Q7Z739 585 aaKnown RBP9.79□□□□□ -0.84
PRPF38A-202ENST00000474048 EFCAB3Q8N7B9 438 aa9.79□□□□□ -0.84
PRPF38A-202ENST00000474048 CLHC1Q8NHS4 586 aa9.79□□□□□ -0.84
PRPF38A-202ENST00000474048 CREB3L4Q8TEY5 395 aa9.79□□□□□ -0.84
PRPF38A-202ENST00000474048 MCUR1Q96AQ8 359 aa9.79□□□□□ -0.84
PRPF38A-202ENST00000474048 MS4A6EQ96DS6 147 aa9.79□□□□□ -0.84
PRPF38A-202ENST00000474048 PPM1MQ96MI6 270 aa9.79□□□□□ -0.84
PRPF38A-202ENST00000474048 FCRL4Q96PJ5 515 aa9.79□□□□□ -0.84
PRPF38A-202ENST00000474048 OR2A5Q96R48 311 aa9.79□□□□□ -0.84
PRPF38A-202ENST00000474048 NDC1Q9BTX1 674 aa9.79□□□□□ -0.84
PRPF38A-202ENST00000474048 STRADBQ9C0K7 418 aa9.79□□□□□ -0.84
PRPF38A-202ENST00000474048 ZNF768Q9H5H4 540 aaKnown RBP9.79□□□□□ -0.84
PRPF38A-202ENST00000474048 GIMAP4Q9NUV9 329 aa9.79□□□□□ -0.84
PRPF38A-202ENST00000474048 GID8Q9NWU2 228 aa9.79□□□□□ -0.84
PRPF38A-202ENST00000474048 PHF11Q9UIL8 331 aa9.79□□□□□ -0.84
PRPF38A-202ENST00000474048 LEF1Q9UJU2 399 aaPredicted RBP9.79□□□□□ -0.84
PRPF38A-202ENST00000474048 WBP11Q9Y2W2 641 aaKnown RBP9.79□□□□□ -0.84
PRPF38A-202ENST00000474048 NDUFAF1Q9Y375 327 aa9.79□□□□□ -0.84
PRPF38A-202ENST00000474048 CCL27Q9Y4X3 112 aa9.79□□□□□ -0.84
PRPF38A-202ENST00000474048 GPR45Q9Y5Y3 372 aa9.79□□□□□ -0.84
PRPF38A-202ENST00000474048 MDC1Q14676 2089 aaKnown RBP9.79□□□□□ -0.84
PRPF38A-202ENST00000474048 GOLGA4Q13439 2230 aaKnown RBP9.78□□□□□ -0.84
PRPF38A-202ENST00000474048 A0A0G2JN53 185 aa9.78□□□□□ -0.84
PRPF38A-202ENST00000474048 D6RAR5 112 aa9.78□□□□□ -0.84
PRPF38A-202ENST00000474048 TMX2-CTNND1H3BSU7 103 aa9.78□□□□□ -0.84
PRPF38A-202ENST00000474048 DLL1O00548 723 aa9.78□□□□□ -0.84
PRPF38A-202ENST00000474048 NVLO15381 856 aaKnown RBP9.78□□□□□ -0.84
PRPF38A-202ENST00000474048 GYG2O15488 501 aa9.78□□□□□ -0.84
PRPF38A-202ENST00000474048 AKAP10O43572 662 aa9.78□□□□□ -0.84
PRPF38A-202ENST00000474048 NRP2O60462 931 aa9.78□□□□□ -0.84
PRPF38A-202ENST00000474048 RFPL3O75679 317 aa9.78□□□□□ -0.84
PRPF38A-202ENST00000474048 UNC5CO95185 931 aa9.78□□□□□ -0.84
PRPF38A-202ENST00000474048 CBX6O95503 412 aa9.78□□□□□ -0.84
PRPF38A-202ENST00000474048 ETHE1O95571 254 aa9.78□□□□□ -0.84
PRPF38A-202ENST00000474048 ANP32DO95626 131 aa9.78□□□□□ -0.84
PRPF38A-202ENST00000474048 GBAP04062 536 aa9.78□□□□□ -0.84
PRPF38A-202ENST00000474048 ANKRD34CP0C6C1 535 aa9.78□□□□□ -0.84
PRPF38A-202ENST00000474048 HOXB3P14651 431 aaPredicted RBP9.78□□□□□ -0.84
PRPF38A-202ENST00000474048 ALOX12P18054 663 aa9.78□□□□□ -0.84
PRPF38A-202ENST00000474048 GPX3P22352 226 aa9.78□□□□□ -0.84
PRPF38A-202ENST00000474048 HNRNPH1P31943 449 aaKnown RBP9.78□□□□□ -0.84
PRPF38A-202ENST00000474048 MRPL19P49406 292 aaKnown RBP9.78□□□□□ -0.84
PRPF38A-202ENST00000474048 NUDT2P50583 147 aa9.78□□□□□ -0.84
PRPF38A-202ENST00000474048 ITGA1P56199 1179 aa9.78□□□□□ -0.84
PRPF38A-202ENST00000474048 CLDN8P56748 225 aa9.78□□□□□ -0.84
PRPF38A-202ENST00000474048 TAS2R50P59544 299 aa9.78□□□□□ -0.84
PRPF38A-202ENST00000474048 UFM1P61960 85 aa9.78□□□□□ -0.84
PRPF38A-202ENST00000474048 TRA2BP62995 288 aaKnown RBP9.78□□□□□ -0.84
PRPF38A-202ENST00000474048 SRSF11Q05519 484 aaKnown RBP9.78□□□□□ -0.84
PRPF38A-202ENST00000474048 FOXM1Q08050 763 aa9.78□□□□□ -0.84
PRPF38A-202ENST00000474048 C2orf80Q0P641 193 aa9.78□□□□□ -0.84
PRPF38A-202ENST00000474048 LRRC74AQ0VAA2 488 aa9.78□□□□□ -0.84
PRPF38A-202ENST00000474048 TBL3Q12788 808 aaKnown RBP9.78□□□□□ -0.84
PRPF38A-202ENST00000474048 ILKQ13418 452 aa9.78□□□□□ -0.84
PRPF38A-202ENST00000474048 SQSTM1Q13501 440 aa9.78□□□□□ -0.84
PRPF38A-202ENST00000474048 PTGR1Q14914 329 aa9.78□□□□□ -0.84
PRPF38A-202ENST00000474048 ZIC1Q15915 447 aa9.78□□□□□ -0.84
PRPF38A-202ENST00000474048 MUM1Q2TAK8 710 aa9.78□□□□□ -0.84
PRPF38A-202ENST00000474048 DNAL1Q4LDG9 190 aa9.78□□□□□ -0.84
PRPF38A-202ENST00000474048 TIGD2Q4W5G0 525 aa9.78□□□□□ -0.84
PRPF38A-202ENST00000474048 FRMPD2BQ6IN97 320 aa9.78□□□□□ -0.84
PRPF38A-202ENST00000474048 FBXO42Q6P3S6 717 aa9.78□□□□□ -0.84
PRPF38A-202ENST00000474048 GALNT18Q6P9A2 607 aa9.78□□□□□ -0.84
PRPF38A-202ENST00000474048 TLDC1Q6P9B6 456 aa9.78□□□□□ -0.84
PRPF38A-202ENST00000474048 C6orf89Q6UWU4 347 aa9.78□□□□□ -0.84
PRPF38A-202ENST00000474048 RBM44Q6ZP01 1051 aaKnown RBP9.78□□□□□ -0.84
PRPF38A-202ENST00000474048 VN1R5Q7Z5H4 357 aa9.78□□□□□ -0.84
PRPF38A-202ENST00000474048 GPR180Q86V85 440 aa9.78□□□□□ -0.84
PRPF38A-202ENST00000474048 POU5F2Q8N7G0 328 aa9.78□□□□□ -0.84
PRPF38A-202ENST00000474048 TSPEARQ8WU66 669 aa9.78□□□□□ -0.84
PRPF38A-202ENST00000474048 GFM2Q969S9 779 aaKnown RBP9.78□□□□□ -0.84
PRPF38A-202ENST00000474048 PPCDCQ96CD2 204 aa9.78□□□□□ -0.84
PRPF38A-202ENST00000474048 SPDL1Q96EA4 605 aa9.78□□□□□ -0.84
PRPF38A-202ENST00000474048 CCDC74BQ96LY2 380 aa9.78□□□□□ -0.84
PRPF38A-202ENST00000474048 SERINC2Q96SA4 455 aa9.78□□□□□ -0.84
PRPF38A-202ENST00000474048 SLC6A16Q9GZN6 736 aa9.78□□□□□ -0.84
PRPF38A-202ENST00000474048 TWSG1Q9GZX9 223 aa9.78□□□□□ -0.84
PRPF38A-202ENST00000474048 CHRNA10Q9GZZ6 450 aa9.78□□□□□ -0.84
PRPF38A-202ENST00000474048 EFCAB1Q9HAE3 211 aa9.78□□□□□ -0.84
PRPF38A-202ENST00000474048 MYNNQ9NPC7 610 aa9.78□□□□□ -0.84
PRPF38A-202ENST00000474048 SIRT5Q9NXA8 310 aa9.78□□□□□ -0.84
PRPF38A-202ENST00000474048 MS4A12Q9NXJ0 267 aa9.78□□□□□ -0.84
PRPF38A-202ENST00000474048 NDOR1Q9UHB4 597 aa9.78□□□□□ -0.84
PRPF38A-202ENST00000474048 BAIAP2L1Q9UHR4 511 aa9.78□□□□□ -0.84
PRPF38A-202ENST00000474048 PILRAQ9UKJ1 303 aa9.78□□□□□ -0.84
PRPF38A-202ENST00000474048 PSME2Q9UL46 239 aa9.78□□□□□ -0.84
PRPF38A-202ENST00000474048 PCDHGB4Q9UN71 923 aa9.78□□□□□ -0.84
PRPF38A-202ENST00000474048 MRPS33Q9Y291 106 aaKnown RBP9.78□□□□□ -0.84
PRPF38A-202ENST00000474048 DLGAP4Q9Y2H0 992 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms