RNA–Protein interactions for RNA: ENST00000473879.1

BRAT1-205, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 3

Gene BRAT1, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-205ENST00000473879 NPIPB8E9PQR5 432 aa12.65□□□□□ -0.38
BRAT1-205ENST00000473879 FCHO1O14526 889 aa12.65□□□□□ -0.38
BRAT1-205ENST00000473879 LSM1O15116 133 aaKnown RBP12.65□□□□□ -0.38
BRAT1-205ENST00000473879 UBDO15205 165 aa12.65□□□□□ -0.38
BRAT1-205ENST00000473879 OR1F1O43749 312 aa12.65□□□□□ -0.38
BRAT1-205ENST00000473879 RAD1O60671 282 aa12.65□□□□□ -0.38
BRAT1-205ENST00000473879 PEX11AO75192 247 aa12.65□□□□□ -0.38
BRAT1-205ENST00000473879 STK17BO94768 372 aa12.65□□□□□ -0.38
BRAT1-205ENST00000473879 MSL3P1P0C860 447 aa12.65□□□□□ -0.38
BRAT1-205ENST00000473879 FGF5P12034 268 aa12.65□□□□□ -0.38
BRAT1-205ENST00000473879 CDH3P22223 829 aa12.65□□□□□ -0.38
BRAT1-205ENST00000473879 PRPH2P23942 346 aa12.65□□□□□ -0.38
BRAT1-205ENST00000473879 MAPK1P28482 360 aa12.65□□□□□ -0.38
BRAT1-205ENST00000473879 AHRP35869 848 aa12.65□□□□□ -0.38
BRAT1-205ENST00000473879 SCTRP47872 440 aa12.65□□□□□ -0.38
BRAT1-205ENST00000473879 NEK2P51955 445 aa12.65□□□□□ -0.38
BRAT1-205ENST00000473879 STX1BP61266 288 aa12.65□□□□□ -0.38
BRAT1-205ENST00000473879 RPS15AP62244 130 aaKnown RBP12.65□□□□□ -0.38
BRAT1-205ENST00000473879 ERVK-8P63133 956 aa12.65□□□□□ -0.38
BRAT1-205ENST00000473879 YBX1P67809 324 aaKnown RBP12.65□□□□□ -0.38
BRAT1-205ENST00000473879 RHDQ02161 417 aa12.65□□□□□ -0.38
BRAT1-205ENST00000473879 FOXM1Q08050 763 aa12.65□□□□□ -0.38
BRAT1-205ENST00000473879 GALNTL6Q49A17 601 aa12.65□□□□□ -0.38
BRAT1-205ENST00000473879 SOWAHCQ53LP3 525 aaPredicted RBP12.65□□□□□ -0.38
BRAT1-205ENST00000473879 SPDYAQ5MJ70 313 aa12.65□□□□□ -0.38
BRAT1-205ENST00000473879 FAM219BQ5XKK7 198 aa12.65□□□□□ -0.38
BRAT1-205ENST00000473879 FIGLAQ6QHK4 219 aa12.65□□□□□ -0.38
BRAT1-205ENST00000473879 Q6ZSR9 355 aa12.65□□□□□ -0.38
BRAT1-205ENST00000473879 TRIM73Q86UV7 250 aa12.65□□□□□ -0.38
BRAT1-205ENST00000473879 PAQR7Q86WK9 346 aa12.65□□□□□ -0.38
BRAT1-205ENST00000473879 PARP9Q8IXQ6 854 aa12.65□□□□□ -0.38
BRAT1-205ENST00000473879 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.65□□□□□ -0.38
BRAT1-205ENST00000473879 FNDC5Q8NAU1 212 aa12.65□□□□□ -0.38
BRAT1-205ENST00000473879 LSM14AQ8ND56 463 aaKnown RBP12.65□□□□□ -0.38
BRAT1-205ENST00000473879 OR2T11Q8NH01 316 aa12.65□□□□□ -0.38
BRAT1-205ENST00000473879 ERP27Q96DN0 273 aa12.65□□□□□ -0.38
BRAT1-205ENST00000473879 CMTM7Q96FZ5 175 aa12.65□□□□□ -0.38
BRAT1-205ENST00000473879 OR6C1Q96RD1 312 aa12.65□□□□□ -0.38
BRAT1-205ENST00000473879 MTERF1Q99551 399 aaKnown RBP12.65□□□□□ -0.38
BRAT1-205ENST00000473879 SERPINI1Q99574 410 aa12.65□□□□□ -0.38
BRAT1-205ENST00000473879 NMUR2Q9GZQ4 415 aa12.65□□□□□ -0.38
BRAT1-205ENST00000473879 SPNS1Q9H2V7 528 aa12.65□□□□□ -0.38
BRAT1-205ENST00000473879 RHBGQ9H310 441 aa12.65□□□□□ -0.38
BRAT1-205ENST00000473879 LRTM1Q9HBL6 345 aa12.65□□□□□ -0.38
BRAT1-205ENST00000473879 DMRT3Q9NQL9 472 aa12.65□□□□□ -0.38
BRAT1-205ENST00000473879 WDR70Q9NW82 654 aa12.65□□□□□ -0.38
BRAT1-205ENST00000473879 C1orf109Q9NX04 203 aa12.65□□□□□ -0.38
BRAT1-205ENST00000473879 VPS29Q9UBQ0 182 aa12.65□□□□□ -0.38
BRAT1-205ENST00000473879 SLC12A4Q9UP95 1085 aa12.65□□□□□ -0.38
BRAT1-205ENST00000473879 FEZF1A0PJY2 475 aa12.64□□□□□ -0.39
BRAT1-205ENST00000473879 CCT8L1PA6NM43 557 aa12.64□□□□□ -0.39
BRAT1-205ENST00000473879 MAGEB17A8MXT2 336 aa12.64□□□□□ -0.39
BRAT1-205ENST00000473879 ERVH48-1M5A8F1 160 aa12.64□□□□□ -0.39
BRAT1-205ENST00000473879 HAT1O14929 419 aa12.64□□□□□ -0.39
BRAT1-205ENST00000473879 CLEC3AO75596 197 aa12.64□□□□□ -0.39
BRAT1-205ENST00000473879 ZBTB11O95625 1053 aaPredicted RBP12.64□□□□□ -0.39
BRAT1-205ENST00000473879 DLGAP3O95886 979 aa12.64□□□□□ -0.39
BRAT1-205ENST00000473879 PCSK2P16519 638 aa12.64□□□□□ -0.39
BRAT1-205ENST00000473879 MAGP20916 626 aa12.64□□□□□ -0.39
BRAT1-205ENST00000473879 ADSLP30566 484 aaPredicted RBP12.64□□□□□ -0.39
BRAT1-205ENST00000473879 ATP4BP51164 291 aa12.64□□□□□ -0.39
BRAT1-205ENST00000473879 RPS13P62277 151 aaKnown RBP12.64□□□□□ -0.39
BRAT1-205ENST00000473879 HSD11B2P80365 405 aa12.64□□□□□ -0.39
BRAT1-205ENST00000473879 HMGCS1Q01581 520 aa12.64□□□□□ -0.39
BRAT1-205ENST00000473879 ACY1Q03154 408 aa12.64□□□□□ -0.39
BRAT1-205ENST00000473879 RELAQ04206 551 aa12.64□□□□□ -0.39
BRAT1-205ENST00000473879 SRSF6Q13247 344 aaKnown RBP12.64□□□□□ -0.39
BRAT1-205ENST00000473879 MAP7Q14244 749 aa12.64□□□□□ -0.39
BRAT1-205ENST00000473879 SQLEQ14534 574 aa12.64□□□□□ -0.39
BRAT1-205ENST00000473879 GSTA3Q16772 222 aa12.64□□□□□ -0.39
BRAT1-205ENST00000473879 AP5B1Q2VPB7 878 aa12.64□□□□□ -0.39
BRAT1-205ENST00000473879 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.64□□□□□ -0.39
BRAT1-205ENST00000473879 C6orf136Q5SQH8 315 aa12.64□□□□□ -0.39
BRAT1-205ENST00000473879 FAM91A1Q658Y4 838 aa12.64□□□□□ -0.39
BRAT1-205ENST00000473879 CHSY3Q70JA7 882 aa12.64□□□□□ -0.39
BRAT1-205ENST00000473879 CLNKQ7Z7G1 428 aa12.64□□□□□ -0.39
BRAT1-205ENST00000473879 VASH2Q86V25 355 aa12.64□□□□□ -0.39
BRAT1-205ENST00000473879 BPHLQ86WA6 291 aaPredicted RBP12.64□□□□□ -0.39
BRAT1-205ENST00000473879 FAM20CQ8IXL6 584 aa12.64□□□□□ -0.39
BRAT1-205ENST00000473879 NLGN4XQ8N0W4 816 aa12.64□□□□□ -0.39
BRAT1-205ENST00000473879 D2HGDHQ8N465 521 aa12.64□□□□□ -0.39
BRAT1-205ENST00000473879 IL22RA1Q8N6P7 574 aa12.64□□□□□ -0.39
BRAT1-205ENST00000473879 ZNF740Q8NDX6 193 aa12.64□□□□□ -0.39
BRAT1-205ENST00000473879 TRPV3Q8NET8 790 aa12.64□□□□□ -0.39
BRAT1-205ENST00000473879 NLGN4YQ8NFZ3 816 aaPredicted RBP12.64□□□□□ -0.39
BRAT1-205ENST00000473879 THAP11Q96EK4 314 aa12.64□□□□□ -0.39
BRAT1-205ENST00000473879 WBP1Q96G27 269 aa12.64□□□□□ -0.39
BRAT1-205ENST00000473879 CATSPER2Q96P56 530 aa12.64□□□□□ -0.39
BRAT1-205ENST00000473879 BBC3Q96PG8 261 aaPredicted RBP12.64□□□□□ -0.39
BRAT1-205ENST00000473879 FCRL4Q96PJ5 515 aa12.64□□□□□ -0.39
BRAT1-205ENST00000473879 CENPKQ9BS16 269 aa12.64□□□□□ -0.39
BRAT1-205ENST00000473879 MYLK2Q9H1R3 596 aa12.64□□□□□ -0.39
BRAT1-205ENST00000473879 PDE7BQ9NP56 450 aa12.64□□□□□ -0.39
BRAT1-205ENST00000473879 C1GALT1Q9NS00 363 aa12.64□□□□□ -0.39
BRAT1-205ENST00000473879 NOP53Q9NZM5 478 aaKnown RBP12.64□□□□□ -0.39
BRAT1-205ENST00000473879 TMED5Q9Y3A6 229 aa12.64□□□□□ -0.39
BRAT1-205ENST00000473879 CCL27Q9Y4X3 112 aa12.64□□□□□ -0.39
BRAT1-205ENST00000473879 SLC22A2O15244 555 aa12.63□□□□□ -0.39
BRAT1-205ENST00000473879 ATXN7O15265 892 aaPredicted RBP12.63□□□□□ -0.39
BRAT1-205ENST00000473879 MAP3K7O43318 606 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms