RNA–Protein interactions for RNA: ENST00000473778.5

C9orf3-214, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 2,396 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-214ENST00000473778 STSP08842 583 aa10.51□□□□□ -0.73
C9orf3-214ENST00000473778 POU2F1P14859 743 aa10.51□□□□□ -0.73
C9orf3-214ENST00000473778 PTPN2P17706 415 aa10.51□□□□□ -0.73
C9orf3-214ENST00000473778 PCGF2P35227 344 aa10.51□□□□□ -0.73
C9orf3-214ENST00000473778 RCVRNP35243 200 aa10.51□□□□□ -0.73
C9orf3-214ENST00000473778 GGT2P36268 569 aa10.51□□□□□ -0.73
C9orf3-214ENST00000473778 CRATP43155 626 aa10.51□□□□□ -0.73
C9orf3-214ENST00000473778 IDH2P48735 452 aaKnown RBP10.51□□□□□ -0.73
C9orf3-214ENST00000473778 DGKEP52429 567 aa10.51□□□□□ -0.73
C9orf3-214ENST00000473778 LIMK1P53667 647 aa10.51□□□□□ -0.73
C9orf3-214ENST00000473778 KCNJ8Q15842 424 aa10.51□□□□□ -0.73
C9orf3-214ENST00000473778 GDPD4Q6W3E5 623 aa10.51□□□□□ -0.73
C9orf3-214ENST00000473778 NEK10Q6ZWH5 1172 aa10.51□□□□□ -0.73
C9orf3-214ENST00000473778 OR4A15Q8NGL6 344 aa10.51□□□□□ -0.73
C9orf3-214ENST00000473778 OR5AK3PQ8NH89 298 aa10.51□□□□□ -0.73
C9orf3-214ENST00000473778 PXYLP1Q8TE99 480 aa10.51□□□□□ -0.73
C9orf3-214ENST00000473778 MRPS31Q92665 395 aaKnown RBP10.51□□□□□ -0.73
C9orf3-214ENST00000473778 SLC38A4Q969I6 547 aa10.51□□□□□ -0.73
C9orf3-214ENST00000473778 PSD2Q9BQI7 771 aa10.51□□□□□ -0.73
C9orf3-214ENST00000473778 EHD1Q9H4M9 534 aa10.51□□□□□ -0.73
C9orf3-214ENST00000473778 PCDHGB3Q9Y5G1 929 aa10.51□□□□□ -0.73
C9orf3-214ENST00000473778 REV3LO60673 3130 aa10.5□□□□□ -0.73
C9orf3-214ENST00000473778 NOTCH4Q99466 2003 aa10.5□□□□□ -0.73
C9orf3-214ENST00000473778 GNG14A0A1W2PPG7 69 aa10.5□□□□□ -0.73
C9orf3-214ENST00000473778 TNFRSF11BO00300 401 aa10.5□□□□□ -0.73
C9orf3-214ENST00000473778 TLL1O43897 1013 aa10.5□□□□□ -0.73
C9orf3-214ENST00000473778 AIREO43918 545 aa10.5□□□□□ -0.73
C9orf3-214ENST00000473778 C6orf47O95873 294 aa10.5□□□□□ -0.73
C9orf3-214ENST00000473778 ALDH1A1P00352 501 aa10.5□□□□□ -0.73
C9orf3-214ENST00000473778 PBLDP30039 288 aaPredicted RBP10.5□□□□□ -0.73
C9orf3-214ENST00000473778 TIE1P35590 1138 aa10.5□□□□□ -0.73
C9orf3-214ENST00000473778 CDH12P55289 794 aa10.5□□□□□ -0.73
C9orf3-214ENST00000473778 CYP4F2P78329 520 aa10.5□□□□□ -0.73
C9orf3-214ENST00000473778 DEFB103AP81534 67 aa10.5□□□□□ -0.73
C9orf3-214ENST00000473778 MEF2AQ02078 507 aaPredicted RBP10.5□□□□□ -0.73
C9orf3-214ENST00000473778 EXOC3L2Q2M3D2 409 aa10.5□□□□□ -0.73
C9orf3-214ENST00000473778 COLEC12Q5KU26 742 aa10.5□□□□□ -0.73
C9orf3-214ENST00000473778 AGAP7PQ5VUJ5 663 aa10.5□□□□□ -0.73
C9orf3-214ENST00000473778 TMPRSS11BQ86T26 416 aa10.5□□□□□ -0.73
C9orf3-214ENST00000473778 METTL3Q86U44 580 aaKnown RBP10.5□□□□□ -0.73
C9orf3-214ENST00000473778 ZNF366Q8N895 744 aa10.5□□□□□ -0.73
C9orf3-214ENST00000473778 MCFD2Q8NI22 146 aa10.5□□□□□ -0.73
C9orf3-214ENST00000473778 CYB5D2Q8WUJ1 264 aa10.5□□□□□ -0.73
C9orf3-214ENST00000473778 IPCEF1Q8WWN9 437 aaPredicted RBP10.5□□□□□ -0.73
C9orf3-214ENST00000473778 CLP1Q92989 425 aaKnown RBP10.5□□□□□ -0.73
C9orf3-214ENST00000473778 CENPOQ9BU64 300 aa10.5□□□□□ -0.73
C9orf3-214ENST00000473778 MIR1-1HGQ9H1L0 117 aa10.5□□□□□ -0.73
C9orf3-214ENST00000473778 OR51E2Q9H255 320 aa10.5□□□□□ -0.73
C9orf3-214ENST00000473778 ITM2BQ9Y287 266 aa10.5□□□□□ -0.73
C9orf3-214ENST00000473778 KIAA1549LQ6ZVL6 1849 aa10.5□□□□□ -0.73
C9orf3-214ENST00000473778 PRAMEF33A0A0G2JMD5 474 aa10.5□□□□□ -0.73
C9orf3-214ENST00000473778 METTL15A6NJ78 407 aa10.5□□□□□ -0.73
C9orf3-214ENST00000473778 CLCA1A8K7I4 914 aa10.5□□□□□ -0.73
C9orf3-214ENST00000473778 FAM227AF5H4B4 570 aa10.5□□□□□ -0.73
C9orf3-214ENST00000473778 PCDH17O14917 1159 aa10.5□□□□□ -0.73
C9orf3-214ENST00000473778 PRAMEF10O60809 474 aa10.5□□□□□ -0.73
C9orf3-214ENST00000473778 LILRB3O75022 631 aa10.5□□□□□ -0.73
C9orf3-214ENST00000473778 CDK1P06493 297 aa10.5□□□□□ -0.73
C9orf3-214ENST00000473778 ADORA3P0DMS8 318 aa10.5□□□□□ -0.73
C9orf3-214ENST00000473778 TIA1P31483 386 aaKnown RBP eCLIP10.5□□□□□ -0.73
C9orf3-214ENST00000473778 GRK3P35626 688 aa10.5□□□□□ -0.73
C9orf3-214ENST00000473778 PXNP49023 591 aaPredicted RBP10.5□□□□□ -0.73
C9orf3-214ENST00000473778 TBCEQ15813 527 aaPredicted RBP10.5□□□□□ -0.73
C9orf3-214ENST00000473778 TIGD6Q17RP2 521 aa10.5□□□□□ -0.73
C9orf3-214ENST00000473778 SLCO4C1Q6ZQN7 724 aa10.5□□□□□ -0.73
C9orf3-214ENST00000473778 VASH1Q7L8A9 365 aaPredicted RBP10.5□□□□□ -0.73
C9orf3-214ENST00000473778 PLD3Q8IV08 490 aa10.5□□□□□ -0.73
C9orf3-214ENST00000473778 LYSMD2Q8IV50 215 aa10.5□□□□□ -0.73
C9orf3-214ENST00000473778 P3H2Q8IVL5 708 aa10.5□□□□□ -0.73
C9orf3-214ENST00000473778 C11orf65Q8NCR3 313 aa10.5□□□□□ -0.73
C9orf3-214ENST00000473778 FAM83FQ8NEG4 500 aaPredicted RBP10.5□□□□□ -0.73
C9orf3-214ENST00000473778 OR10G2Q8NGC3 310 aa10.5□□□□□ -0.73
C9orf3-214ENST00000473778 OR56A3Q8NH54 315 aa10.5□□□□□ -0.73
C9orf3-214ENST00000473778 NFKBIDQ8NI38 313 aa10.5□□□□□ -0.73
C9orf3-214ENST00000473778 WDR48Q8TAF3 677 aa10.5□□□□□ -0.73
C9orf3-214ENST00000473778 ZNF689Q96CS4 500 aaPredicted RBP10.5□□□□□ -0.73
C9orf3-214ENST00000473778 ZNF558Q96NG5 402 aa10.5□□□□□ -0.73
C9orf3-214ENST00000473778 NRTNQ99748 197 aa10.5□□□□□ -0.73
C9orf3-214ENST00000473778 CTRCQ99895 268 aa10.5□□□□□ -0.73
C9orf3-214ENST00000473778 CDADC1Q9BWV3 514 aa10.5□□□□□ -0.73
C9orf3-214ENST00000473778 LINC00597Q9H2U6 94 aa10.5□□□□□ -0.73
C9orf3-214ENST00000473778 BRF2Q9HAW0 419 aa10.5□□□□□ -0.73
C9orf3-214ENST00000473778 RC3H2Q9HBD1 1191 aaKnown RBP10.5□□□□□ -0.73
C9orf3-214ENST00000473778 ADPRHL2Q9NX46 363 aa10.5□□□□□ -0.73
C9orf3-214ENST00000473778 TMA7Q9Y2S6 64 aaKnown RBP10.5□□□□□ -0.73
C9orf3-214ENST00000473778 HCFC2Q9Y5Z7 792 aa10.5□□□□□ -0.73
C9orf3-214ENST00000473778 SLC5A10A0PJK1 596 aa10.49□□□□□ -0.73
C9orf3-214ENST00000473778 RNASET2O00584 256 aaKnown RBP10.49□□□□□ -0.73
C9orf3-214ENST00000473778 TCEA1P23193 301 aaKnown RBP10.49□□□□□ -0.73
C9orf3-214ENST00000473778 HNF4AP41235 474 aa10.49□□□□□ -0.73
C9orf3-214ENST00000473778 SERPINB10P48595 397 aa10.49□□□□□ -0.73
C9orf3-214ENST00000473778 PPP5CP53041 499 aa10.49□□□□□ -0.73
C9orf3-214ENST00000473778 METAP1P53582 386 aa10.49□□□□□ -0.73
C9orf3-214ENST00000473778 EEF1A2Q05639 463 aaKnown RBP10.49□□□□□ -0.73
C9orf3-214ENST00000473778 KCNC3Q14003 757 aa10.49□□□□□ -0.73
C9orf3-214ENST00000473778 GANABQ14697 944 aaKnown RBP10.49□□□□□ -0.73
C9orf3-214ENST00000473778 GRIN2CQ14957 1233 aa10.49□□□□□ -0.73
C9orf3-214ENST00000473778 CARTPTQ16568 116 aa10.49□□□□□ -0.73
C9orf3-214ENST00000473778 SLC5A12Q1EHB4 618 aa10.49□□□□□ -0.73
C9orf3-214ENST00000473778 ARSIQ5FYB1 569 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms