RNA–Protein interactions for RNA: ENST00000472024.2

CHMP2B-204, Transcript of charged multivesicular body protein 2B, humanhuman

TSL 5

Gene CHMP2B, Length 836 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-204ENST00000472024 PRDX6P30041 224 aa18.49■□□□□ 0.55
CHMP2B-204ENST00000472024 TRA2BP62995 288 aaKnown RBP18.49■□□□□ 0.55
CHMP2B-204ENST00000472024 KLF10Q13118 480 aa18.49■□□□□ 0.55
CHMP2B-204ENST00000472024 UBAP2LQ14157 1087 aaKnown RBP18.49■□□□□ 0.55
CHMP2B-204ENST00000472024 SPIDRQ14159 915 aa18.49■□□□□ 0.55
CHMP2B-204ENST00000472024 TOR1AIP1Q5JTV8 583 aa18.49■□□□□ 0.55
CHMP2B-204ENST00000472024 OR4C11Q6IEV9 310 aa18.49■□□□□ 0.55
CHMP2B-204ENST00000472024 NUDT13Q86X67 352 aa18.49■□□□□ 0.55
CHMP2B-204ENST00000472024 MIER2Q8N344 545 aa18.49■□□□□ 0.55
CHMP2B-204ENST00000472024 C1orf50Q9BV19 199 aa18.49■□□□□ 0.55
CHMP2B-204ENST00000472024 NLNQ9BYT8 704 aa18.49■□□□□ 0.55
CHMP2B-204ENST00000472024 KLHL3Q9UH77 587 aa18.49■□□□□ 0.55
CHMP2B-204ENST00000472024 CAPN7Q9Y6W3 813 aa18.49■□□□□ 0.55
CHMP2B-204ENST00000472024 ZFHX2Q9C0A1 2572 aaPredicted RBP18.49■□□□□ 0.55
CHMP2B-204ENST00000472024 FAM186AA6NE01 2351 aa18.48■□□□□ 0.55
CHMP2B-204ENST00000472024 PCNX2A6NKB5 2137 aa18.48■□□□□ 0.55
CHMP2B-204ENST00000472024 EBAG9O00559 213 aa18.48■□□□□ 0.55
CHMP2B-204ENST00000472024 TM4SF5O14894 197 aa18.48■□□□□ 0.55
CHMP2B-204ENST00000472024 PCDH7O60245 1069 aa18.48■□□□□ 0.55
CHMP2B-204ENST00000472024 CSRP1P21291 193 aaKnown RBP18.48■□□□□ 0.55
CHMP2B-204ENST00000472024 ASMTP46597 345 aa18.48■□□□□ 0.55
CHMP2B-204ENST00000472024 ZFP36L2P47974 494 aaKnown RBP18.48■□□□□ 0.55
CHMP2B-204ENST00000472024 PPM1FP49593 454 aaPredicted RBP18.48■□□□□ 0.55
CHMP2B-204ENST00000472024 CLDN8P56748 225 aa18.48■□□□□ 0.55
CHMP2B-204ENST00000472024 VSX2P58304 361 aaPredicted RBP18.48■□□□□ 0.55
CHMP2B-204ENST00000472024 STX1BP61266 288 aa18.48■□□□□ 0.55
CHMP2B-204ENST00000472024 HKDC1Q2TB90 917 aa18.48■□□□□ 0.55
CHMP2B-204ENST00000472024 WASHC2DQ5SRD0 308 aa18.48■□□□□ 0.55
CHMP2B-204ENST00000472024 YOD1Q5VVQ6 348 aaPredicted RBP18.48■□□□□ 0.55
CHMP2B-204ENST00000472024 MRM1Q6IN84 353 aaKnown RBP18.48■□□□□ 0.55
CHMP2B-204ENST00000472024 TRIM40Q6P9F5 258 aa18.48■□□□□ 0.55
CHMP2B-204ENST00000472024 ZNF793Q6ZN11 406 aa18.48■□□□□ 0.55
CHMP2B-204ENST00000472024 IKBIPQ70UQ0 350 aa18.48■□□□□ 0.55
CHMP2B-204ENST00000472024 ABHD13Q7L211 337 aa18.48■□□□□ 0.55
CHMP2B-204ENST00000472024 TREML1Q86YW5 311 aa18.48■□□□□ 0.55
CHMP2B-204ENST00000472024 RIMKLAQ8IXN7 391 aa18.48■□□□□ 0.55
CHMP2B-204ENST00000472024 LIX1Q8N485 282 aa18.48■□□□□ 0.55
CHMP2B-204ENST00000472024 KCT2Q8NC54 265 aa18.48■□□□□ 0.55
CHMP2B-204ENST00000472024 OR8K5Q8NH50 307 aa18.48■□□□□ 0.55
CHMP2B-204ENST00000472024 TSPEARQ8WU66 669 aa18.48■□□□□ 0.55
CHMP2B-204ENST00000472024 ZNF501Q96CX3 271 aaPredicted RBP18.48■□□□□ 0.55
CHMP2B-204ENST00000472024 ZNF764Q96H86 408 aaPredicted RBP18.48■□□□□ 0.55
CHMP2B-204ENST00000472024 MARK4Q96L34 752 aa18.48■□□□□ 0.55
CHMP2B-204ENST00000472024 TEFMQ96QE5 360 aaKnown RBP18.48■□□□□ 0.55
CHMP2B-204ENST00000472024 PHOX2BQ99453 314 aa18.48■□□□□ 0.55
CHMP2B-204ENST00000472024 ZMYND15Q9H091 742 aa18.48■□□□□ 0.55
CHMP2B-204ENST00000472024 MYNNQ9NPC7 610 aa18.48■□□□□ 0.55
CHMP2B-204ENST00000472024 MAPRE3Q9UPY8 281 aa18.48■□□□□ 0.55
CHMP2B-204ENST00000472024 PSMD12O00232 456 aaPredicted RBP18.47■□□□□ 0.55
CHMP2B-204ENST00000472024 ERI3O43414 337 aaKnown RBP18.47■□□□□ 0.55
CHMP2B-204ENST00000472024 SERPIND1P05546 499 aa18.47■□□□□ 0.55
CHMP2B-204ENST00000472024 ALOX12P18054 663 aa18.47■□□□□ 0.55
CHMP2B-204ENST00000472024 HIST1H1TP22492 207 aaPredicted RBP18.47■□□□□ 0.55
CHMP2B-204ENST00000472024 TACR1P25103 407 aa18.47■□□□□ 0.55
CHMP2B-204ENST00000472024 ATP5A1P25705 553 aaKnown RBP18.47■□□□□ 0.55
CHMP2B-204ENST00000472024 PIK3R1P27986 724 aa18.47■□□□□ 0.55
CHMP2B-204ENST00000472024 RAP1GDS1P52306 607 aa18.47■□□□□ 0.55
CHMP2B-204ENST00000472024 ACY1Q03154 408 aa18.47■□□□□ 0.55
CHMP2B-204ENST00000472024 ZNF763Q0D2J5 394 aa18.47■□□□□ 0.55
CHMP2B-204ENST00000472024 FAM53BQ14153 422 aa18.47■□□□□ 0.55
CHMP2B-204ENST00000472024 DEFB110Q30KQ9 67 aa18.47■□□□□ 0.55
CHMP2B-204ENST00000472024 NIPAL1Q6NVV3 410 aa18.47■□□□□ 0.55
CHMP2B-204ENST00000472024 RBM44Q6ZP01 1051 aaKnown RBP18.47■□□□□ 0.55
CHMP2B-204ENST00000472024 FUNDC1Q8IVP5 155 aa18.47■□□□□ 0.55
CHMP2B-204ENST00000472024 GLB1L3Q8NCI6 653 aaPredicted RBP18.47■□□□□ 0.55
CHMP2B-204ENST00000472024 PROKR1Q8TCW9 393 aa18.47■□□□□ 0.55
CHMP2B-204ENST00000472024 MACROD1Q9BQ69 325 aa18.47■□□□□ 0.55
CHMP2B-204ENST00000472024 CLK4Q9HAZ1 481 aaKnown RBP18.47■□□□□ 0.55
CHMP2B-204ENST00000472024 SLC52A3Q9NQ40 469 aa18.47■□□□□ 0.55
CHMP2B-204ENST00000472024 ARMCX1Q9P291 453 aa18.47■□□□□ 0.55
CHMP2B-204ENST00000472024 SAP18O00422 153 aaKnown RBP18.46■□□□□ 0.55
CHMP2B-204ENST00000472024 TBX19O60806 448 aa18.46■□□□□ 0.55
CHMP2B-204ENST00000472024 SH3BGRLO75368 114 aa18.46■□□□□ 0.55
CHMP2B-204ENST00000472024 EEDO75530 441 aaKnown RBP18.46■□□□□ 0.55
CHMP2B-204ENST00000472024 CTSBP07858 339 aa18.46■□□□□ 0.55
CHMP2B-204ENST00000472024 ANXA4P09525 319 aaPredicted RBP18.46■□□□□ 0.55
CHMP2B-204ENST00000472024 FOLR1P15328 257 aa18.46■□□□□ 0.55
CHMP2B-204ENST00000472024 ARL4DP49703 201 aa18.46■□□□□ 0.55
CHMP2B-204ENST00000472024 SEPHS1P49903 392 aa18.46■□□□□ 0.55
CHMP2B-204ENST00000472024 RCAN2Q14206 197 aa18.46■□□□□ 0.55
CHMP2B-204ENST00000472024 GRM7Q14831 915 aa18.46■□□□□ 0.55
CHMP2B-204ENST00000472024 PTGR1Q14914 329 aa18.46■□□□□ 0.55
CHMP2B-204ENST00000472024 SNAP47Q5SQN1 464 aa18.46■□□□□ 0.55
CHMP2B-204ENST00000472024 TLDC1Q6P9B6 456 aa18.46■□□□□ 0.55
CHMP2B-204ENST00000472024 BPHLQ86WA6 291 aaPredicted RBP18.46■□□□□ 0.55
CHMP2B-204ENST00000472024 CACTIN-AS1Q8N1I8 211 aa18.46■□□□□ 0.55
CHMP2B-204ENST00000472024 NETO1Q8TDF5 533 aa18.46■□□□□ 0.55
CHMP2B-204ENST00000472024 TESCQ96BS2 214 aa18.46■□□□□ 0.55
CHMP2B-204ENST00000472024 C10orf90Q96M02 699 aa18.46■□□□□ 0.55
CHMP2B-204ENST00000472024 C17orf62Q9BQA9 187 aa18.46■□□□□ 0.55
CHMP2B-204ENST00000472024 PRDM9Q9NQV7 894 aa18.46■□□□□ 0.55
CHMP2B-204ENST00000472024 A0A088AWK7 358 aa18.45■□□□□ 0.54
CHMP2B-204ENST00000472024 DYTNA2CJ06 578 aa18.45■□□□□ 0.54
CHMP2B-204ENST00000472024 TMX2-CTNND1H3BSU7 103 aa18.45■□□□□ 0.54
CHMP2B-204ENST00000472024 RTCAO00442 366 aaKnown RBP18.45■□□□□ 0.54
CHMP2B-204ENST00000472024 SLC22A3O75751 556 aa18.45■□□□□ 0.54
CHMP2B-204ENST00000472024 KLK1P06870 262 aa18.45■□□□□ 0.54
CHMP2B-204ENST00000472024 ZNF888P0CJ79 500 aaPredicted RBP18.45■□□□□ 0.54
CHMP2B-204ENST00000472024 PRPS1L1P21108 318 aa18.45■□□□□ 0.54
CHMP2B-204ENST00000472024 ZNF10P21506 573 aaPredicted RBP18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 114 ms