RNA–Protein interactions for RNA: ENST00000471996.1

SORT1-203, Transcript of sortilin 1, humanhuman

TSL 3

Gene SORT1, Length 469 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-203ENST00000471996 SDCCAG8Q86SQ7 713 aaPredicted RBP17.68■□□□□ 0.42
SORT1-203ENST00000471996 ASB11Q8WXH4 323 aa17.68■□□□□ 0.42
SORT1-203ENST00000471996 SLCO2A1Q92959 643 aa17.68■□□□□ 0.42
SORT1-203ENST00000471996 ATG10Q9H0Y0 220 aa17.68■□□□□ 0.42
SORT1-203ENST00000471996 CCDC177Q9NQR7 707 aaPredicted RBP17.68■□□□□ 0.42
SORT1-203ENST00000471996 FBXW2Q9UKT8 454 aa17.68■□□□□ 0.42
SORT1-203ENST00000471996 ERVK-11Q9UQG0 969 aa17.68■□□□□ 0.42
SORT1-203ENST00000471996 CRYL1Q9Y2S2 319 aa17.68■□□□□ 0.42
SORT1-203ENST00000471996 SCN3AQ9NY46 2000 aa17.67■□□□□ 0.42
SORT1-203ENST00000471996 ZNF407Q9C0G0 2248 aa17.67■□□□□ 0.42
SORT1-203ENST00000471996 IGKV3D-11A0A0A0MRZ8 115 aa17.67■□□□□ 0.42
SORT1-203ENST00000471996 A8MUA0 341 aa17.67■□□□□ 0.42
SORT1-203ENST00000471996 AQP7O14520 342 aa17.67■□□□□ 0.42
SORT1-203ENST00000471996 NMBRP28336 390 aa17.67■□□□□ 0.42
SORT1-203ENST00000471996 NDUFAF5Q5TEU4 345 aa17.67■□□□□ 0.42
SORT1-203ENST00000471996 SHEQ5VZ18 495 aa17.67■□□□□ 0.42
SORT1-203ENST00000471996 FBXW10Q5XX13 1052 aa17.67■□□□□ 0.42
SORT1-203ENST00000471996 MRNIPQ6NTE8 343 aa17.67■□□□□ 0.42
SORT1-203ENST00000471996 GPALPP1Q8IXQ4 340 aa17.67■□□□□ 0.42
SORT1-203ENST00000471996 ZNF740Q8NDX6 193 aa17.67■□□□□ 0.42
SORT1-203ENST00000471996 B3GNT7Q8NFL0 401 aa17.67■□□□□ 0.42
SORT1-203ENST00000471996 PLEKHF2Q9H8W4 249 aa17.67■□□□□ 0.42
SORT1-203ENST00000471996 ACAD8Q9UKU7 415 aa17.67■□□□□ 0.42
SORT1-203ENST00000471996 SH2B3Q9UQQ2 575 aa17.67■□□□□ 0.42
SORT1-203ENST00000471996 YARS2Q9Y2Z4 477 aaKnown RBP17.67■□□□□ 0.42
SORT1-203ENST00000471996 PCDHA13Q9Y5I0 950 aa17.67■□□□□ 0.42
SORT1-203ENST00000471996 DNAJC13O75165 2243 aa17.67■□□□□ 0.42
SORT1-203ENST00000471996 A8MVJ9 347 aa17.66■□□□□ 0.42
SORT1-203ENST00000471996 E5RI56 91 aa17.66■□□□□ 0.42
SORT1-203ENST00000471996 GFYI3L273 518 aa17.66■□□□□ 0.42
SORT1-203ENST00000471996 ZBTB14O43829 449 aa17.66■□□□□ 0.42
SORT1-203ENST00000471996 ALOX12P18054 663 aa17.66■□□□□ 0.42
SORT1-203ENST00000471996 MAOAP21397 527 aa17.66■□□□□ 0.42
SORT1-203ENST00000471996 ARNTP27540 789 aa17.66■□□□□ 0.42
SORT1-203ENST00000471996 PCSK6P29122 969 aa17.66■□□□□ 0.42
SORT1-203ENST00000471996 STIP1P31948 543 aaKnown RBP17.66■□□□□ 0.42
SORT1-203ENST00000471996 CLCN7P51798 805 aa17.66■□□□□ 0.42
SORT1-203ENST00000471996 TBPL1P62380 186 aa17.66■□□□□ 0.42
SORT1-203ENST00000471996 SKP1P63208 163 aa17.66■□□□□ 0.42
SORT1-203ENST00000471996 NKX6-1P78426 367 aaPredicted RBP17.66■□□□□ 0.42
SORT1-203ENST00000471996 CRADDP78560 199 aa17.66■□□□□ 0.42
SORT1-203ENST00000471996 DEFB134Q4QY38 66 aa17.66■□□□□ 0.42
SORT1-203ENST00000471996 VSTM4Q8IW00 320 aa17.66■□□□□ 0.42
SORT1-203ENST00000471996 MFSD9Q8NBP5 474 aa17.66■□□□□ 0.42
SORT1-203ENST00000471996 TCF12Q99081 682 aa17.66■□□□□ 0.42
SORT1-203ENST00000471996 SLC30A3Q99726 388 aa17.66■□□□□ 0.42
SORT1-203ENST00000471996 SH3GL2Q99962 352 aa17.66■□□□□ 0.42
SORT1-203ENST00000471996 PCBD2Q9H0N5 130 aa17.66■□□□□ 0.42
SORT1-203ENST00000471996 PRDM9Q9NQV7 894 aa17.66■□□□□ 0.42
SORT1-203ENST00000471996 RAB6BQ9NRW1 208 aa17.66■□□□□ 0.42
SORT1-203ENST00000471996 HPF1Q9NWY4 346 aa17.66■□□□□ 0.42
SORT1-203ENST00000471996 A0A0G2JMM0 328 aa17.65■□□□□ 0.42
SORT1-203ENST00000471996 A0A1W2PPB8 328 aa17.65■□□□□ 0.42
SORT1-203ENST00000471996 A0A1W2PRS3 328 aa17.65■□□□□ 0.42
SORT1-203ENST00000471996 KIR3DP1A8MWS1 328 aa17.65■□□□□ 0.42
SORT1-203ENST00000471996 PFDN6O15212 129 aa17.65■□□□□ 0.42
SORT1-203ENST00000471996 SUSD5O60279 629 aa17.65■□□□□ 0.42
SORT1-203ENST00000471996 VAPBO95292 243 aa17.65■□□□□ 0.42
SORT1-203ENST00000471996 B3GALT4O96024 378 aa17.65■□□□□ 0.42
SORT1-203ENST00000471996 GRK3P35626 688 aa17.65■□□□□ 0.42
SORT1-203ENST00000471996 MAGEA5P43359 124 aa17.65■□□□□ 0.42
SORT1-203ENST00000471996 SESN2P58004 480 aaPredicted RBP17.65■□□□□ 0.42
SORT1-203ENST00000471996 DCAF7P61962 342 aa17.65■□□□□ 0.42
SORT1-203ENST00000471996 TTLL9Q3SXZ7 439 aa17.65■□□□□ 0.42
SORT1-203ENST00000471996 WLSQ5T9L3 541 aa17.65■□□□□ 0.42
SORT1-203ENST00000471996 NIPAL1Q6NVV3 410 aa17.65■□□□□ 0.42
SORT1-203ENST00000471996 C17orf64Q86WR6 236 aa17.65■□□□□ 0.42
SORT1-203ENST00000471996 FAM109AQ8N4B1 249 aa17.65■□□□□ 0.42
SORT1-203ENST00000471996 TMEM251Q8N6I4 163 aa17.65■□□□□ 0.42
SORT1-203ENST00000471996 RELL2Q8NC24 303 aaPredicted RBP17.65■□□□□ 0.42
SORT1-203ENST00000471996 RNASE6Q93091 150 aaKnown RBP17.65■□□□□ 0.42
SORT1-203ENST00000471996 SARAFQ96BY9 339 aa17.65■□□□□ 0.42
SORT1-203ENST00000471996 LRRC46Q96FV0 321 aa17.65■□□□□ 0.42
SORT1-203ENST00000471996 COX4I2Q96KJ9 171 aa17.65■□□□□ 0.42
SORT1-203ENST00000471996 CALR3Q96L12 384 aaKnown RBP17.65■□□□□ 0.42
SORT1-203ENST00000471996 NECTIN3Q9NQS3 549 aa17.65■□□□□ 0.42
SORT1-203ENST00000471996 BEX4Q9NWD9 120 aaPredicted RBP17.65■□□□□ 0.42
SORT1-203ENST00000471996 ALKBH4Q9NXW9 302 aa17.65■□□□□ 0.42
SORT1-203ENST00000471996 ZNF223Q9UK11 482 aaPredicted RBP17.65■□□□□ 0.42
SORT1-203ENST00000471996 DRG1Q9Y295 367 aaKnown RBP17.65■□□□□ 0.42
SORT1-203ENST00000471996 HSPB2A8KAH6 182 aa17.64■□□□□ 0.41
SORT1-203ENST00000471996 GOLGA8KD6RF30 607 aa17.64■□□□□ 0.41
SORT1-203ENST00000471996 GOLGA8TH3BQL2 631 aa17.64■□□□□ 0.41
SORT1-203ENST00000471996 NDUFS4O43181 175 aa17.64■□□□□ 0.41
SORT1-203ENST00000471996 CBFA2T2O43439 604 aa17.64■□□□□ 0.41
SORT1-203ENST00000471996 MYO1DO94832 1006 aa17.64■□□□□ 0.41
SORT1-203ENST00000471996 APRTP07741 180 aa17.64■□□□□ 0.41
SORT1-203ENST00000471996 MPC1LP0DKB6 136 aa17.64■□□□□ 0.41
SORT1-203ENST00000471996 EPXP11678 715 aa17.64■□□□□ 0.41
SORT1-203ENST00000471996 GABRA1P14867 456 aa17.64■□□□□ 0.41
SORT1-203ENST00000471996 MAN2A2P49641 1150 aa17.64■□□□□ 0.41
SORT1-203ENST00000471996 ASCL1P50553 236 aa17.64■□□□□ 0.41
SORT1-203ENST00000471996 HYAL2Q12891 473 aa17.64■□□□□ 0.41
SORT1-203ENST00000471996 PWP1Q13610 501 aa17.64■□□□□ 0.41
SORT1-203ENST00000471996 PCBP2Q15366 365 aaKnown RBP eCLIP17.64■□□□□ 0.41
SORT1-203ENST00000471996 TERF2Q15554 542 aa17.64■□□□□ 0.41
SORT1-203ENST00000471996 HSPB2Q16082 182 aa17.64■□□□□ 0.41
SORT1-203ENST00000471996 FBXL19-AS1Q494R0 122 aa17.64■□□□□ 0.41
SORT1-203ENST00000471996 IL20RBQ6UXL0 311 aa17.64■□□□□ 0.41
SORT1-203ENST00000471996 CYHR1Q6ZMK1 362 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms