RNA–Protein interactions for RNA: ENST00000471246.1

UBXN4-207, Transcript of UBX domain protein 4, humanhuman

TSL 3

Gene UBXN4, Length 395 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-207ENST00000471246 KRBOX4Q5JUW0 171 aa1.06□□□□□ -2.24
UBXN4-207ENST00000471246 ZNF506Q5JVG8 444 aa1.06□□□□□ -2.24
UBXN4-207ENST00000471246 MUC21Q5SSG8 566 aa1.06□□□□□ -2.24
UBXN4-207ENST00000471246 TEX35Q5T0J7 233 aa1.06□□□□□ -2.24
UBXN4-207ENST00000471246 ATAD3CQ5T2N8 411 aa1.06□□□□□ -2.24
UBXN4-207ENST00000471246 CFAP58Q5T655 872 aa1.06□□□□□ -2.24
UBXN4-207ENST00000471246 FHL5Q5TD97 284 aa1.06□□□□□ -2.24
UBXN4-207ENST00000471246 FAM166AQ6J272 317 aa1.06□□□□□ -2.24
UBXN4-207ENST00000471246 KRT80Q6KB66 452 aa1.06□□□□□ -2.24
UBXN4-207ENST00000471246 FUT10Q6P4F1 479 aa1.06□□□□□ -2.24
UBXN4-207ENST00000471246 EMBQ6PCB8 327 aa1.06□□□□□ -2.24
UBXN4-207ENST00000471246 CCBE1Q6UXH8 406 aaPredicted RBP1.06□□□□□ -2.24
UBXN4-207ENST00000471246 MACC1Q6ZN28 852 aa1.06□□□□□ -2.24
UBXN4-207ENST00000471246 Q6ZVQ6 151 aa1.06□□□□□ -2.24
UBXN4-207ENST00000471246 Q71RC1 249 aaPredicted RBP1.06□□□□□ -2.24
UBXN4-207ENST00000471246 TRMT11Q7Z4G4 463 aaKnown RBP1.06□□□□□ -2.24
UBXN4-207ENST00000471246 NRARPQ7Z6K4 114 aa1.06□□□□□ -2.24
UBXN4-207ENST00000471246 PRUNE1Q86TP1 453 aa1.06□□□□□ -2.24
UBXN4-207ENST00000471246 RPAINQ86UA6 219 aa1.06□□□□□ -2.24
UBXN4-207ENST00000471246 FAM219AQ8IW50 185 aa1.06□□□□□ -2.24
UBXN4-207ENST00000471246 ZC3H3Q8IXZ2 948 aaKnown RBP1.06□□□□□ -2.24
UBXN4-207ENST00000471246 PRSS35Q8N3Z0 413 aa1.06□□□□□ -2.24
UBXN4-207ENST00000471246 CCDC185Q8N715 623 aa1.06□□□□□ -2.24
UBXN4-207ENST00000471246 KCTD6Q8NC69 237 aa1.06□□□□□ -2.24
UBXN4-207ENST00000471246 CAMKVQ8NCB2 501 aa1.06□□□□□ -2.24
UBXN4-207ENST00000471246 KIAA1524Q8TCG1 905 aa1.06□□□□□ -2.24
UBXN4-207ENST00000471246 SLC26A7Q8TE54 656 aa1.06□□□□□ -2.24
UBXN4-207ENST00000471246 GRK7Q8WTQ7 553 aa1.06□□□□□ -2.24
UBXN4-207ENST00000471246 ITLN1Q8WWA0 313 aa1.06□□□□□ -2.24
UBXN4-207ENST00000471246 MRPS27Q92552 414 aaKnown RBP1.06□□□□□ -2.24
UBXN4-207ENST00000471246 EXT2Q93063 718 aa1.06□□□□□ -2.24
UBXN4-207ENST00000471246 NABP1Q96AH0 204 aa1.06□□□□□ -2.24
UBXN4-207ENST00000471246 RUNDC3BQ96NL0 473 aa1.06□□□□□ -2.24
UBXN4-207ENST00000471246 ZIM3Q96PE6 472 aa1.06□□□□□ -2.24
UBXN4-207ENST00000471246 PCDHB18PQ96TA0 734 aa1.06□□□□□ -2.24
UBXN4-207ENST00000471246 APOL2Q9BQE5 337 aa1.06□□□□□ -2.24
UBXN4-207ENST00000471246 SLF1Q9BQI6 1058 aa1.06□□□□□ -2.24
UBXN4-207ENST00000471246 KATNB1Q9BVA0 655 aa1.06□□□□□ -2.24
UBXN4-207ENST00000471246 CHMP4AQ9BY43 222 aa1.06□□□□□ -2.24
UBXN4-207ENST00000471246 MAF1Q9H063 256 aa1.06□□□□□ -2.24
UBXN4-207ENST00000471246 MARCH7Q9H992 704 aa1.06□□□□□ -2.24
UBXN4-207ENST00000471246 KCNK13Q9HB14 408 aa1.06□□□□□ -2.24
UBXN4-207ENST00000471246 DEPPQ9NTK1 212 aa1.06□□□□□ -2.24
UBXN4-207ENST00000471246 NYAP2Q9P242 653 aa1.06□□□□□ -2.24
UBXN4-207ENST00000471246 UBQLN2Q9UHD9 624 aa1.06□□□□□ -2.24
UBXN4-207ENST00000471246 PRO0461Q9UI25 63 aa1.06□□□□□ -2.24
UBXN4-207ENST00000471246 ZNF346Q9UL40 294 aaKnown RBP1.06□□□□□ -2.24
UBXN4-207ENST00000471246 AGTPBP1Q9UPW5 1226 aa1.06□□□□□ -2.24
UBXN4-207ENST00000471246 SATB2Q9UPW6 733 aa1.06□□□□□ -2.24
UBXN4-207ENST00000471246 NAALAD2Q9Y3Q0 740 aa1.06□□□□□ -2.24
UBXN4-207ENST00000471246 HEG1Q9ULI3 1381 aa1.06□□□□□ -2.24
UBXN4-207ENST00000471246 RPL37AP8A6NKH3 93 aa1.05□□□□□ -2.24
UBXN4-207ENST00000471246 TCP10L2B9ZVM9 353 aa1.05□□□□□ -2.24
UBXN4-207ENST00000471246 PRSS46E5RG02 174 aa1.05□□□□□ -2.24
UBXN4-207ENST00000471246 ANHXE9PGG2 379 aa1.05□□□□□ -2.24
UBXN4-207ENST00000471246 LMO7DNF2Z398 122 aa1.05□□□□□ -2.24
UBXN4-207ENST00000471246 CCDC188H7C350 402 aa1.05□□□□□ -2.24
UBXN4-207ENST00000471246 UBE2CO00762 179 aa1.05□□□□□ -2.24
UBXN4-207ENST00000471246 MLNRO43193 412 aa1.05□□□□□ -2.24
UBXN4-207ENST00000471246 PRAF2O60831 178 aa1.05□□□□□ -2.24
UBXN4-207ENST00000471246 SEMA4FO95754 770 aa1.05□□□□□ -2.24
UBXN4-207ENST00000471246 ANGPTL1O95841 491 aa1.05□□□□□ -2.24
UBXN4-207ENST00000471246 LY6G6DO95868 133 aa1.05□□□□□ -2.24
UBXN4-207ENST00000471246 IGHG1P01857 330 aa1.05□□□□□ -2.24
UBXN4-207ENST00000471246 C9P02748 559 aa1.05□□□□□ -2.24
UBXN4-207ENST00000471246 MT-ND2P03891 347 aa1.05□□□□□ -2.24
UBXN4-207ENST00000471246 FYNP06241 537 aa1.05□□□□□ -2.24
UBXN4-207ENST00000471246 HCKP08631 526 aa1.05□□□□□ -2.24
UBXN4-207ENST00000471246 QDPRP09417 244 aa1.05□□□□□ -2.24
UBXN4-207ENST00000471246 EEF2P13639 858 aaKnown RBP1.05□□□□□ -2.24
UBXN4-207ENST00000471246 FDPSP14324 419 aaKnown RBP1.05□□□□□ -2.24
UBXN4-207ENST00000471246 ANPEPP15144 967 aa1.05□□□□□ -2.24
UBXN4-207ENST00000471246 TCF4P15884 667 aa1.05□□□□□ -2.24
UBXN4-207ENST00000471246 ZNF19P17023 458 aa1.05□□□□□ -2.24
UBXN4-207ENST00000471246 ERCC2P18074 760 aa1.05□□□□□ -2.24
UBXN4-207ENST00000471246 CTNNA2P26232 953 aa1.05□□□□□ -2.24
UBXN4-207ENST00000471246 SSTR1P30872 391 aa1.05□□□□□ -2.24
UBXN4-207ENST00000471246 FEN1P39748 380 aaKnown RBP1.05□□□□□ -2.24
UBXN4-207ENST00000471246 OR3A3P47888 321 aa1.05□□□□□ -2.24
UBXN4-207ENST00000471246 RGS7P49802 495 aa1.05□□□□□ -2.24
UBXN4-207ENST00000471246 MFAP3P55082 362 aa1.05□□□□□ -2.24
UBXN4-207ENST00000471246 PEX3P56589 373 aa1.05□□□□□ -2.24
UBXN4-207ENST00000471246 EVCP57679 992 aa1.05□□□□□ -2.24
UBXN4-207ENST00000471246 CALD1Q05682 793 aaKnown RBP1.05□□□□□ -2.24
UBXN4-207ENST00000471246 AIMP1Q12904 312 aaKnown RBP1.05□□□□□ -2.24
UBXN4-207ENST00000471246 PRPF4BQ13523 1007 aaKnown RBP1.05□□□□□ -2.24
UBXN4-207ENST00000471246 CYLC2Q14093 348 aaPredicted RBP1.05□□□□□ -2.24
UBXN4-207ENST00000471246 COG2Q14746 738 aa1.05□□□□□ -2.24
UBXN4-207ENST00000471246 TAZQ16635 292 aa1.05□□□□□ -2.24
UBXN4-207ENST00000471246 KYNUQ16719 465 aa1.05□□□□□ -2.24
UBXN4-207ENST00000471246 ECSCRQ19T08 205 aa1.05□□□□□ -2.24
UBXN4-207ENST00000471246 LRRC37A5PQ49AS3 106 aa1.05□□□□□ -2.24
UBXN4-207ENST00000471246 ZNF542PQ5EBM4 170 aa1.05□□□□□ -2.24
UBXN4-207ENST00000471246 ZRANB3Q5FWF4 1079 aa1.05□□□□□ -2.24
UBXN4-207ENST00000471246 NHLRC3Q5JS37 347 aa1.05□□□□□ -2.24
UBXN4-207ENST00000471246 LRRC73Q5JTD7 316 aa1.05□□□□□ -2.24
UBXN4-207ENST00000471246 UTF1Q5T230 341 aa1.05□□□□□ -2.24
UBXN4-207ENST00000471246 LINC00242Q5T6M2 205 aa1.05□□□□□ -2.24
UBXN4-207ENST00000471246 FAM46CQ5VWP2 391 aa1.05□□□□□ -2.24
UBXN4-207ENST00000471246 RSBN1Q5VWQ0 802 aaPredicted RBP1.05□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms