RNA–Protein interactions for RNA: ENST00000470944.1

SOD1-203, Transcript of superoxide dismutase 1, humanhuman

TSL 2

Gene SOD1, Length 1,746 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOD1-203ENST00000470944 LRTM1Q9HBL6 345 aa27.43■■□□□ 1.98
SOD1-203ENST00000470944 DHCR7Q9UBM7 475 aaKnown RBP27.43■■□□□ 1.98
SOD1-203ENST00000470944 NPIPB8E9PQR5 432 aa27.42■■□□□ 1.98
SOD1-203ENST00000470944 GBAP04062 536 aa27.42■■□□□ 1.98
SOD1-203ENST00000470944 PRR35P0CG20 571 aa27.42■■□□□ 1.98
SOD1-203ENST00000470944 IL1RNP18510 177 aa27.42■■□□□ 1.98
SOD1-203ENST00000470944 PRPH2P23942 346 aa27.42■■□□□ 1.98
SOD1-203ENST00000470944 RAP1GDS1P52306 607 aa27.42■■□□□ 1.98
SOD1-203ENST00000470944 KIAA0040Q15053 153 aa27.42■■□□□ 1.98
SOD1-203ENST00000470944 DEFB134Q4QY38 66 aa27.42■■□□□ 1.98
SOD1-203ENST00000470944 C6orf136Q5SQH8 315 aa27.42■■□□□ 1.98
SOD1-203ENST00000470944 ZNF793Q6ZN11 406 aa27.42■■□□□ 1.98
SOD1-203ENST00000470944 METTL4Q8N3J2 472 aa27.42■■□□□ 1.98
SOD1-203ENST00000470944 GALNT15Q8N3T1 639 aa27.42■■□□□ 1.98
SOD1-203ENST00000470944 TTC29Q8NA56 475 aaPredicted RBP27.42■■□□□ 1.98
SOD1-203ENST00000470944 WDR36Q8NI36 951 aaKnown RBP27.42■■□□□ 1.98
SOD1-203ENST00000470944 RGMAQ96B86 450 aa27.42■■□□□ 1.98
SOD1-203ENST00000470944 C11orf24Q96F05 449 aaPredicted RBP27.42■■□□□ 1.98
SOD1-203ENST00000470944 TMEM120AQ9BXJ8 343 aa27.42■■□□□ 1.98
SOD1-203ENST00000470944 PRDM7Q9NQW5 492 aa27.42■■□□□ 1.98
SOD1-203ENST00000470944 CUTCQ9NTM9 273 aa27.42■■□□□ 1.98
SOD1-203ENST00000470944 C1orf109Q9NX04 203 aa27.42■■□□□ 1.98
SOD1-203ENST00000470944 KLHL14Q9P2G3 628 aa27.42■■□□□ 1.98
SOD1-203ENST00000470944 SEC22BO75396 215 aa27.41■■□□□ 1.98
SOD1-203ENST00000470944 SCRG1O75711 98 aa27.41■■□□□ 1.98
SOD1-203ENST00000470944 SEMA3DO95025 777 aa27.41■■□□□ 1.98
SOD1-203ENST00000470944 ALOX12P18054 663 aa27.41■■□□□ 1.98
SOD1-203ENST00000470944 BSGP35613 385 aa27.41■■□□□ 1.98
SOD1-203ENST00000470944 TRIM40Q6P9F5 258 aa27.41■■□□□ 1.98
SOD1-203ENST00000470944 ABHD13Q7L211 337 aa27.41■■□□□ 1.98
SOD1-203ENST00000470944 COMMD6Q7Z4G1 85 aa27.41■■□□□ 1.98
SOD1-203ENST00000470944 TMEM126BQ8IUX1 230 aa27.41■■□□□ 1.98
SOD1-203ENST00000470944 SLC38A9Q8NBW4 561 aa27.41■■□□□ 1.98
SOD1-203ENST00000470944 KCNC2Q96PR1 638 aa27.41■■□□□ 1.98
SOD1-203ENST00000470944 CCT8L2Q96SF2 557 aa27.41■■□□□ 1.98
SOD1-203ENST00000470944 NSRP1Q9H0G5 558 aaKnown RBP27.41■■□□□ 1.98
SOD1-203ENST00000470944 NMRK1Q9NWW6 199 aa27.41■■□□□ 1.98
SOD1-203ENST00000470944 B3GALT1Q9Y5Z6 326 aa27.41■■□□□ 1.98
SOD1-203ENST00000470944 SLC22A7Q9Y694 548 aa27.41■■□□□ 1.98
SOD1-203ENST00000470944 URADA6NGE7 173 aa27.41■■□□□ 1.98
SOD1-203ENST00000470944 SRRM3A6NNA2 597 aaPredicted RBP27.41■■□□□ 1.98
SOD1-203ENST00000470944 FOXS1O43638 330 aa27.41■■□□□ 1.98
SOD1-203ENST00000470944 EEDO75530 441 aaKnown RBP27.41■■□□□ 1.98
SOD1-203ENST00000470944 RPL38P63173 70 aaKnown RBP27.41■■□□□ 1.98
SOD1-203ENST00000470944 BTN3A2P78410 334 aa27.41■■□□□ 1.98
SOD1-203ENST00000470944 ATP6AP1LQ52LC2 224 aa27.41■■□□□ 1.98
SOD1-203ENST00000470944 OR4C11Q6IEV9 310 aa27.41■■□□□ 1.98
SOD1-203ENST00000470944 TTLL10Q6ZVT0 673 aa27.41■■□□□ 1.98
SOD1-203ENST00000470944 BPHLQ86WA6 291 aaPredicted RBP27.41■■□□□ 1.98
SOD1-203ENST00000470944 SHISA5Q8N114 240 aa27.41■■□□□ 1.98
SOD1-203ENST00000470944 SIKE1Q9BRV8 207 aa27.41■■□□□ 1.98
SOD1-203ENST00000470944 CENPKQ9BS16 269 aa27.41■■□□□ 1.98
SOD1-203ENST00000470944 NDC1Q9BTX1 674 aa27.41■■□□□ 1.98
SOD1-203ENST00000470944 NTRK1P04629 796 aa27.4■■□□□ 1.98
SOD1-203ENST00000470944 ZNF28P17035 718 aa27.4■■□□□ 1.98
SOD1-203ENST00000470944 RAE1P78406 368 aaKnown RBP27.4■■□□□ 1.98
SOD1-203ENST00000470944 PUM1Q14671 1186 aaKnown RBP eCLIP27.4■■□□□ 1.982e-7■□□□□ 9.4
SOD1-203ENST00000470944 LSM12Q3MHD2 195 aaKnown RBP27.4■■□□□ 1.98
SOD1-203ENST00000470944 LARP7Q4G0J3 582 aaKnown RBP eCLIP27.4■■□□□ 1.98
SOD1-203ENST00000470944 GARNL3Q5VVW2 1013 aa27.4■■□□□ 1.98
SOD1-203ENST00000470944 NXNQ6DKJ4 435 aa27.4■■□□□ 1.98
SOD1-203ENST00000470944 SPATA21Q7Z572 469 aa27.4■■□□□ 1.98
SOD1-203ENST00000470944 ZFAND4Q86XD8 727 aa27.4■■□□□ 1.98
SOD1-203ENST00000470944 METTL27Q8N6F8 245 aaPredicted RBP27.4■■□□□ 1.98
SOD1-203ENST00000470944 OR9A4Q8NGU2 314 aa27.4■■□□□ 1.98
SOD1-203ENST00000470944 PPP3R2Q96LZ3 170 aa27.4■■□□□ 1.98
SOD1-203ENST00000470944 QRFPRQ96P65 431 aa27.4■■□□□ 1.98
SOD1-203ENST00000470944 NAALAD2Q9Y3Q0 740 aa27.4■■□□□ 1.98
SOD1-203ENST00000470944 POLR3HQ9Y535 204 aaPredicted RBP27.4■■□□□ 1.98
SOD1-203ENST00000470944 PTPRBP23467 1997 aa27.4■■□□□ 1.98
SOD1-203ENST00000470944 A0A0A6YYC8 382 aaPredicted RBP27.39■■□□□ 1.98
SOD1-203ENST00000470944 ZNF860A6NHJ4 632 aa27.39■■□□□ 1.98
SOD1-203ENST00000470944 I3L1I5 382 aaPredicted RBP27.39■■□□□ 1.98
SOD1-203ENST00000470944 DNAJB6O75190 326 aa27.39■■□□□ 1.98
SOD1-203ENST00000470944 EMP3P54852 163 aa27.39■■□□□ 1.98
SOD1-203ENST00000470944 ACSM2AQ08AH3 577 aa27.39■■□□□ 1.98
SOD1-203ENST00000470944 MUM1Q2TAK8 710 aa27.39■■□□□ 1.98
SOD1-203ENST00000470944 FAM214AQ32MH5 1076 aa27.39■■□□□ 1.98
SOD1-203ENST00000470944 ACSM2BQ68CK6 577 aa27.39■■□□□ 1.98
SOD1-203ENST00000470944 CYB5D1Q6P9G0 228 aa27.39■■□□□ 1.98
SOD1-203ENST00000470944 ACTRT2Q8TDY3 377 aa27.39■■□□□ 1.98
SOD1-203ENST00000470944 C10orf82Q8WW14 230 aa27.39■■□□□ 1.98
SOD1-203ENST00000470944 TBCDQ9BTW9 1192 aa27.39■■□□□ 1.98
SOD1-203ENST00000470944 C1orf50Q9BV19 199 aa27.39■■□□□ 1.98
SOD1-203ENST00000470944 ACTR5Q9H9F9 607 aaPredicted RBP27.39■■□□□ 1.98
SOD1-203ENST00000470944 TCF7L2Q9NQB0 619 aa27.39■■□□□ 1.98
SOD1-203ENST00000470944 KNTC1P50748 2209 aa27.39■■□□□ 1.98
SOD1-203ENST00000470944 SNX3O60493 162 aa27.38■■□□□ 1.97
SOD1-203ENST00000470944 KLHL18O94889 574 aa27.38■■□□□ 1.97
SOD1-203ENST00000470944 KLK1P06870 262 aa27.38■■□□□ 1.97
SOD1-203ENST00000470944 ALAS2P22557 587 aa27.38■■□□□ 1.97
SOD1-203ENST00000470944 CERS1P27544 350 aa27.38■■□□□ 1.97
SOD1-203ENST00000470944 SSR2P43308 183 aa27.38■■□□□ 1.97
SOD1-203ENST00000470944 HERC3Q15034 1050 aa27.38■■□□□ 1.97
SOD1-203ENST00000470944 NDUFA9Q16795 377 aa27.38■■□□□ 1.97
SOD1-203ENST00000470944 SPIN4Q56A73 249 aa27.38■■□□□ 1.97
SOD1-203ENST00000470944 DCAF12Q5T6F0 453 aa27.38■■□□□ 1.97
SOD1-203ENST00000470944 TMEM198Q66K66 360 aa27.38■■□□□ 1.97
SOD1-203ENST00000470944 RIPOR1Q6ZS17 1223 aa27.38■■□□□ 1.97
SOD1-203ENST00000470944 FNDC5Q8NAU1 212 aa27.38■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms