RNA–Protein interactions for RNA: ENST00000470837.1

CCM2-204, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-204ENST00000470837 ACY1Q03154 408 aa9.3□□□□□ -0.92
CCM2-204ENST00000470837 SRSF11Q05519 484 aaKnown RBP9.3□□□□□ -0.92
CCM2-204ENST00000470837 BNIP1Q12981 228 aa9.3□□□□□ -0.92
CCM2-204ENST00000470837 ILKQ13418 452 aa9.3□□□□□ -0.92
CCM2-204ENST00000470837 TRA2AQ13595 282 aaKnown RBP eCLIP9.3□□□□□ -0.92
CCM2-204ENST00000470837 GRM7Q14831 915 aa9.3□□□□□ -0.92
CCM2-204ENST00000470837 HEPACAMQ14CZ8 416 aa9.3□□□□□ -0.92
CCM2-204ENST00000470837 KIAA0040Q15053 153 aa9.3□□□□□ -0.92
CCM2-204ENST00000470837 DPY19L1Q2PZI1 675 aa9.3□□□□□ -0.92
CCM2-204ENST00000470837 HKDC1Q2TB90 917 aa9.3□□□□□ -0.92
CCM2-204ENST00000470837 DEFB110Q30KQ9 67 aa9.3□□□□□ -0.92
CCM2-204ENST00000470837 ADPRMQ3LIE5 342 aa9.3□□□□□ -0.92
CCM2-204ENST00000470837 CCDC157Q569K6 752 aa9.3□□□□□ -0.92
CCM2-204ENST00000470837 WASHC2DQ5SRD0 308 aa9.3□□□□□ -0.92
CCM2-204ENST00000470837 FRMPD2BQ6IN97 320 aa9.3□□□□□ -0.92
CCM2-204ENST00000470837 GALNT18Q6P9A2 607 aa9.3□□□□□ -0.92
CCM2-204ENST00000470837 IKBIPQ70UQ0 350 aa9.3□□□□□ -0.92
CCM2-204ENST00000470837 VN1R4Q7Z5H5 301 aa9.3□□□□□ -0.92
CCM2-204ENST00000470837 SNX32Q86XE0 403 aa9.3□□□□□ -0.92
CCM2-204ENST00000470837 OR4N4Q8N0Y3 316 aa9.3□□□□□ -0.92
CCM2-204ENST00000470837 DNAJC22Q8N4W6 341 aa9.3□□□□□ -0.92
CCM2-204ENST00000470837 VPS37AQ8NEZ2 397 aa9.3□□□□□ -0.92
CCM2-204ENST00000470837 CLHC1Q8NHS4 586 aa9.3□□□□□ -0.92
CCM2-204ENST00000470837 ZCCHC10Q8TBK6 192 aa9.3□□□□□ -0.92
CCM2-204ENST00000470837 TSPEARQ8WU66 669 aa9.3□□□□□ -0.92
CCM2-204ENST00000470837 MS4A6EQ96DS6 147 aa9.3□□□□□ -0.92
CCM2-204ENST00000470837 TMEM74Q96NL1 305 aa9.3□□□□□ -0.92
CCM2-204ENST00000470837 MACROD1Q9BQ69 325 aa9.3□□□□□ -0.92
CCM2-204ENST00000470837 SLC6A16Q9GZN6 736 aa9.3□□□□□ -0.92
CCM2-204ENST00000470837 ZNF768Q9H5H4 540 aaKnown RBP9.3□□□□□ -0.92
CCM2-204ENST00000470837 ZNF385DQ9H6B1 395 aa9.3□□□□□ -0.92
CCM2-204ENST00000470837 RMND5AQ9H871 391 aa9.3□□□□□ -0.92
CCM2-204ENST00000470837 DDX31Q9H8H2 851 aaKnown RBP9.3□□□□□ -0.92
CCM2-204ENST00000470837 WDR41Q9HAD4 459 aa9.3□□□□□ -0.92
CCM2-204ENST00000470837 EFCAB1Q9HAE3 211 aa9.3□□□□□ -0.92
CCM2-204ENST00000470837 ANKHQ9HCJ1 492 aa9.3□□□□□ -0.92
CCM2-204ENST00000470837 MIEF1Q9NQG6 463 aa9.3□□□□□ -0.92
CCM2-204ENST00000470837 ARL8BQ9NVJ2 186 aa9.3□□□□□ -0.92
CCM2-204ENST00000470837 LYARQ9NX58 379 aaKnown RBP9.3□□□□□ -0.92
CCM2-204ENST00000470837 SIRT5Q9NXA8 310 aa9.3□□□□□ -0.92
CCM2-204ENST00000470837 BAIAP2L1Q9UHR4 511 aa9.3□□□□□ -0.92
CCM2-204ENST00000470837 CLCA2Q9UQC9 943 aa9.3□□□□□ -0.92
CCM2-204ENST00000470837 DLGAP4Q9Y2H0 992 aa9.3□□□□□ -0.92
CCM2-204ENST00000470837 TNRC6BQ9UPQ9 1833 aaKnown RBP9.3□□□□□ -0.92
CCM2-204ENST00000470837 TDRD6O60522 2096 aaKnown RBP9.29□□□□□ -0.92
CCM2-204ENST00000470837 A0A0G2JN53 185 aa9.29□□□□□ -0.92
CCM2-204ENST00000470837 TMEM150CB9EJG8 249 aa9.29□□□□□ -0.92
CCM2-204ENST00000470837 TMX2-CTNND1H3BSU7 103 aa9.29□□□□□ -0.92
CCM2-204ENST00000470837 RTCAO00442 366 aaKnown RBP9.29□□□□□ -0.92
CCM2-204ENST00000470837 AKAP10O43572 662 aa9.29□□□□□ -0.92
CCM2-204ENST00000470837 PRAMEF10O60809 474 aa9.29□□□□□ -0.92
CCM2-204ENST00000470837 OR2B3O76000 313 aa9.29□□□□□ -0.92
CCM2-204ENST00000470837 LRATO95237 230 aa9.29□□□□□ -0.92
CCM2-204ENST00000470837 GBAP04062 536 aa9.29□□□□□ -0.92
CCM2-204ENST00000470837 KRT16P08779 473 aa9.29□□□□□ -0.92
CCM2-204ENST00000470837 ANKRD34CP0C6C1 535 aa9.29□□□□□ -0.92
CCM2-204ENST00000470837 CDK4P11802 303 aa9.29□□□□□ -0.92
CCM2-204ENST00000470837 CD59P13987 128 aa9.29□□□□□ -0.92
CCM2-204ENST00000470837 ALOX12P18054 663 aa9.29□□□□□ -0.92
CCM2-204ENST00000470837 NELFEP18615 380 aaKnown RBP9.29□□□□□ -0.92
CCM2-204ENST00000470837 HIST1H1TP22492 207 aaPredicted RBP9.29□□□□□ -0.92
CCM2-204ENST00000470837 S100A3P33764 101 aa9.29□□□□□ -0.92
CCM2-204ENST00000470837 BUD31P41223 144 aaPredicted RBP9.29□□□□□ -0.92
CCM2-204ENST00000470837 AVPR1BP47901 424 aa9.29□□□□□ -0.92
CCM2-204ENST00000470837 ALDH9A1P49189 494 aa9.29□□□□□ -0.92
CCM2-204ENST00000470837 TAS2R50P59544 299 aa9.29□□□□□ -0.92
CCM2-204ENST00000470837 C2orf80Q0P641 193 aa9.29□□□□□ -0.92
CCM2-204ENST00000470837 SLAMF1Q13291 335 aa9.29□□□□□ -0.92
CCM2-204ENST00000470837 PTGR1Q14914 329 aa9.29□□□□□ -0.92
CCM2-204ENST00000470837 MUM1Q2TAK8 710 aa9.29□□□□□ -0.92
CCM2-204ENST00000470837 FAM214AQ32MH5 1076 aa9.29□□□□□ -0.92
CCM2-204ENST00000470837 PGS1Q32NB8 556 aa9.29□□□□□ -0.92
CCM2-204ENST00000470837 CPTPQ5TA50 214 aa9.29□□□□□ -0.92
CCM2-204ENST00000470837 GARNL3Q5VVW2 1013 aa9.29□□□□□ -0.92
CCM2-204ENST00000470837 TLDC1Q6P9B6 456 aa9.29□□□□□ -0.92
CCM2-204ENST00000470837 ABHD17CQ6PCB6 329 aa9.29□□□□□ -0.92
CCM2-204ENST00000470837 GK5Q6ZS86 529 aa9.29□□□□□ -0.92
CCM2-204ENST00000470837 TREML1Q86YW5 311 aa9.29□□□□□ -0.92
CCM2-204ENST00000470837 ARHGAP24Q8N264 748 aa9.29□□□□□ -0.92
CCM2-204ENST00000470837 D2HGDHQ8N465 521 aa9.29□□□□□ -0.92
CCM2-204ENST00000470837 POU5F2Q8N7G0 328 aa9.29□□□□□ -0.92
CCM2-204ENST00000470837 KCT2Q8NC54 265 aa9.29□□□□□ -0.92
CCM2-204ENST00000470837 C16orf78Q8WTQ4 265 aa9.29□□□□□ -0.92
CCM2-204ENST00000470837 KLHL6Q8WZ60 621 aa9.29□□□□□ -0.92
CCM2-204ENST00000470837 TM4SF19Q96DZ7 209 aa9.29□□□□□ -0.92
CCM2-204ENST00000470837 SPDL1Q96EA4 605 aa9.29□□□□□ -0.92
CCM2-204ENST00000470837 SLC41A2Q96JW4 573 aa9.29□□□□□ -0.92
CCM2-204ENST00000470837 FCRL1Q96LA6 429 aa9.29□□□□□ -0.92
CCM2-204ENST00000470837 CCDC74BQ96LY2 380 aa9.29□□□□□ -0.92
CCM2-204ENST00000470837 SERINC2Q96SA4 455 aa9.29□□□□□ -0.92
CCM2-204ENST00000470837 NDC1Q9BTX1 674 aa9.29□□□□□ -0.92
CCM2-204ENST00000470837 STRADBQ9C0K7 418 aa9.29□□□□□ -0.92
CCM2-204ENST00000470837 ACTR5Q9H9F9 607 aaPredicted RBP9.29□□□□□ -0.92
CCM2-204ENST00000470837 FAM60AQ9NP50 221 aa9.29□□□□□ -0.92
CCM2-204ENST00000470837 MYNNQ9NPC7 610 aa9.29□□□□□ -0.92
CCM2-204ENST00000470837 GID8Q9NWU2 228 aa9.29□□□□□ -0.92
CCM2-204ENST00000470837 TMEM9Q9P0T7 183 aa9.29□□□□□ -0.92
CCM2-204ENST00000470837 SH3BP4Q9P0V3 963 aa9.29□□□□□ -0.92
CCM2-204ENST00000470837 PHF11Q9UIL8 331 aa9.29□□□□□ -0.92
CCM2-204ENST00000470837 LEF1Q9UJU2 399 aaPredicted RBP9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms