RNA–Protein interactions for RNA: ENST00000470763.1

NPHP4-207, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 3,156 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-207ENST00000470763 GPX2P18283 190 aa13.23□□□□□ -0.29
NPHP4-207ENST00000470763 FEN1P39748 380 aaKnown RBP13.23□□□□□ -0.29
NPHP4-207ENST00000470763 MAP2K3P46734 347 aa13.23□□□□□ -0.29
NPHP4-207ENST00000470763 SF1Q15637 639 aaKnown RBP13.23□□□□□ -0.29
NPHP4-207ENST00000470763 TOR1AIP1Q5JTV8 583 aa13.23□□□□□ -0.29
NPHP4-207ENST00000470763 KIAA1841Q6NSI8 718 aa13.23□□□□□ -0.29
NPHP4-207ENST00000470763 ERICH5Q6P6B1 374 aa13.23□□□□□ -0.29
NPHP4-207ENST00000470763 KLHL17Q6TDP4 642 aa13.23□□□□□ -0.29
NPHP4-207ENST00000470763 ANGPTL8Q6UXH0 198 aa13.23□□□□□ -0.29
NPHP4-207ENST00000470763 OR8H3Q8N146 312 aa13.23□□□□□ -0.29
NPHP4-207ENST00000470763 OR7D4Q8NG98 312 aa13.23□□□□□ -0.29
NPHP4-207ENST00000470763 OR9Q1Q8NGQ5 310 aa13.23□□□□□ -0.29
NPHP4-207ENST00000470763 USP7Q93009 1102 aa13.23□□□□□ -0.29
NPHP4-207ENST00000470763 FATE1Q969F0 183 aa13.23□□□□□ -0.29
NPHP4-207ENST00000470763 PMEPA1Q969W9 287 aa13.23□□□□□ -0.29
NPHP4-207ENST00000470763 C8orf48Q96LL4 319 aa13.23□□□□□ -0.29
NPHP4-207ENST00000470763 SPON2Q9BUD6 331 aa13.23□□□□□ -0.29
NPHP4-207ENST00000470763 FAM126AQ9BYI3 521 aaPredicted RBP13.23□□□□□ -0.29
NPHP4-207ENST00000470763 UCKL1Q9NWZ5 548 aa13.23□□□□□ -0.29
NPHP4-207ENST00000470763 COL4A4P53420 1690 aaPredicted RBP13.23□□□□□ -0.29
NPHP4-207ENST00000470763 ALPK3Q96L96 1907 aa13.22□□□□□ -0.29
NPHP4-207ENST00000470763 WASHC1A8K0Z3 465 aa13.22□□□□□ -0.29
NPHP4-207ENST00000470763 TMEM229AB2RXF0 380 aa13.22□□□□□ -0.29
NPHP4-207ENST00000470763 BTN3A3O00478 584 aa13.22□□□□□ -0.29
NPHP4-207ENST00000470763 CSO75390 466 aaKnown RBP13.22□□□□□ -0.29
NPHP4-207ENST00000470763 GNRH1P01148 92 aa13.22□□□□□ -0.29
NPHP4-207ENST00000470763 HLA-EP13747 358 aa13.22□□□□□ -0.29
NPHP4-207ENST00000470763 ENPP1P22413 925 aa13.22□□□□□ -0.29
NPHP4-207ENST00000470763 CDC42P60953 191 aa13.22□□□□□ -0.29
NPHP4-207ENST00000470763 UBE3AQ05086 875 aa13.22□□□□□ -0.29
NPHP4-207ENST00000470763 DGKKQ5KSL6 1271 aa13.22□□□□□ -0.29
NPHP4-207ENST00000470763 CARNMT1Q8N4J0 409 aa13.22□□□□□ -0.29
NPHP4-207ENST00000470763 UPRTQ96BW1 309 aa13.22□□□□□ -0.29
NPHP4-207ENST00000470763 COPS8Q99627 209 aa13.22□□□□□ -0.29
NPHP4-207ENST00000470763 CRISPLD1Q9H336 500 aa13.22□□□□□ -0.29
NPHP4-207ENST00000470763 C11orf16Q9NQ32 467 aa13.22□□□□□ -0.29
NPHP4-207ENST00000470763 EVA1BQ9NVM1 165 aa13.22□□□□□ -0.29
NPHP4-207ENST00000470763 ABI2Q9NYB9 513 aaPredicted RBP13.22□□□□□ -0.29
NPHP4-207ENST00000470763 SRRDQ9UH36 339 aa13.22□□□□□ -0.29
NPHP4-207ENST00000470763 DOCK3Q8IZD9 2030 aa13.22□□□□□ -0.29
NPHP4-207ENST00000470763 SLC35F4A4IF30 521 aa13.22□□□□□ -0.29
NPHP4-207ENST00000470763 TNFRSF10BO14763 440 aa13.22□□□□□ -0.29
NPHP4-207ENST00000470763 YY2O15391 372 aa13.22□□□□□ -0.29
NPHP4-207ENST00000470763 LRRTM2O43300 516 aa13.22□□□□□ -0.29
NPHP4-207ENST00000470763 GSTM1P09488 218 aa13.22□□□□□ -0.29
NPHP4-207ENST00000470763 EBLN1P0CF75 366 aa13.22□□□□□ -0.29
NPHP4-207ENST00000470763 CNR2P34972 360 aa13.22□□□□□ -0.29
NPHP4-207ENST00000470763 GPR15P49685 360 aa13.22□□□□□ -0.29
NPHP4-207ENST00000470763 CAV3P56539 151 aa13.22□□□□□ -0.29
NPHP4-207ENST00000470763 ZNF267Q14586 743 aaPredicted RBP13.22□□□□□ -0.29
NPHP4-207ENST00000470763 GANABQ14697 944 aaKnown RBP13.22□□□□□ -0.29
NPHP4-207ENST00000470763 C17orf62Q9BQA9 187 aa13.22□□□□□ -0.29
NPHP4-207ENST00000470763 ACBD6Q9BR61 282 aa13.22□□□□□ -0.29
NPHP4-207ENST00000470763 C1QTNF7Q9BXJ2 289 aa13.22□□□□□ -0.29
NPHP4-207ENST00000470763 MROH8Q9H579 483 aa13.22□□□□□ -0.29
NPHP4-207ENST00000470763 TPT1P8Q9HAU6 139 aa13.22□□□□□ -0.29
NPHP4-207ENST00000470763 LATS2Q9NRM7 1088 aa13.22□□□□□ -0.29
NPHP4-207ENST00000470763 DNAJC27Q9NZQ0 273 aa13.22□□□□□ -0.29
NPHP4-207ENST00000470763 AFF4Q9UHB7 1163 aaKnown RBP13.22□□□□□ -0.29
NPHP4-207ENST00000470763 FZD4Q9ULV1 537 aa13.22□□□□□ -0.29
NPHP4-207ENST00000470763 RAI2Q9Y5P3 530 aa13.22□□□□□ -0.29
NPHP4-207ENST00000470763 FAM227AF5H4B4 570 aa13.22□□□□□ -0.29
NPHP4-207ENST00000470763 F8W810 466 aa13.22□□□□□ -0.29
NPHP4-207ENST00000470763 PCDH17O14917 1159 aa13.22□□□□□ -0.29
NPHP4-207ENST00000470763 ADAMDEC1O15204 470 aa13.22□□□□□ -0.29
NPHP4-207ENST00000470763 ENTPD6O75354 484 aa13.22□□□□□ -0.29
NPHP4-207ENST00000470763 ODC1P11926 461 aa13.22□□□□□ -0.29
NPHP4-207ENST00000470763 PTGER3P43115 390 aa13.22□□□□□ -0.29
NPHP4-207ENST00000470763 CDH18Q13634 790 aa13.22□□□□□ -0.29
NPHP4-207ENST00000470763 SPHARQ15513 63 aa13.22□□□□□ -0.29
NPHP4-207ENST00000470763 WSCD2Q2TBF2 565 aa13.22□□□□□ -0.29
NPHP4-207ENST00000470763 LCN1P1Q5VSP4 162 aa13.22□□□□□ -0.29
NPHP4-207ENST00000470763 TIGD3Q6B0B8 471 aa13.22□□□□□ -0.29
NPHP4-207ENST00000470763 C22orf42Q6IC83 251 aa13.22□□□□□ -0.29
NPHP4-207ENST00000470763 BCDIN3DQ7Z5W3 292 aaKnown RBP13.22□□□□□ -0.29
NPHP4-207ENST00000470763 PGBD3Q8N328 593 aa13.22□□□□□ -0.29
NPHP4-207ENST00000470763 CREB3L4Q8TEY5 395 aa13.22□□□□□ -0.29
NPHP4-207ENST00000470763 BTN2A2Q8WVV5 523 aa13.22□□□□□ -0.29
NPHP4-207ENST00000470763 MSANTD3Q96H12 275 aa13.22□□□□□ -0.29
NPHP4-207ENST00000470763 POLR2J2Q9GZM3 115 aaKnown RBP13.22□□□□□ -0.29
NPHP4-207ENST00000470763 ELOVL6Q9H5J4 265 aa13.22□□□□□ -0.29
NPHP4-207ENST00000470763 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.22□□□□□ -0.29
NPHP4-207ENST00000470763 RHCGQ9UBD6 479 aa13.22□□□□□ -0.29
NPHP4-207ENST00000470763 TRPS1Q9UHF7 1281 aa13.22□□□□□ -0.29
NPHP4-207ENST00000470763 NUP50Q9UKX7 468 aa13.22□□□□□ -0.29
NPHP4-207ENST00000470763 LOC102723532A0A0G2JNH3 316 aa13.21□□□□□ -0.29
NPHP4-207ENST00000470763 IQCMA0A1B0GVH7 501 aa13.21□□□□□ -0.29
NPHP4-207ENST00000470763 FAM240BA0A1B0GVZ2 78 aa13.21□□□□□ -0.29
NPHP4-207ENST00000470763 RRN3P2A6NIE6 340 aa13.21□□□□□ -0.29
NPHP4-207ENST00000470763 PDPK1O15530 556 aa13.21□□□□□ -0.29
NPHP4-207ENST00000470763 PDE9AO76083 593 aa13.21□□□□□ -0.29
NPHP4-207ENST00000470763 CLDN9O95484 217 aa13.21□□□□□ -0.29
NPHP4-207ENST00000470763 ANXA8P13928 327 aa13.21□□□□□ -0.29
NPHP4-207ENST00000470763 CLCN4P51793 760 aa13.21□□□□□ -0.29
NPHP4-207ENST00000470763 CYP4F8P98187 520 aa13.21□□□□□ -0.29
NPHP4-207ENST00000470763 TAGLNQ01995 201 aaKnown RBP13.21□□□□□ -0.29
NPHP4-207ENST00000470763 FLYWCH1Q4VC44 716 aa13.21□□□□□ -0.29
NPHP4-207ENST00000470763 TMIGD1Q6UXZ0 262 aa13.21□□□□□ -0.29
NPHP4-207ENST00000470763 SPATA2LQ8IUW3 424 aaPredicted RBP13.21□□□□□ -0.29
NPHP4-207ENST00000470763 GPR65Q8IYL9 337 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms