RNA–Protein interactions for RNA: ENST00000470026.5

BRCA1-209, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-209ENST00000470026 RAPGEFL1Q9UHV5 662 aa13.1□□□□□ -0.31
BRCA1-209ENST00000470026 WDR37Q9Y2I8 494 aa13.1□□□□□ -0.31
BRCA1-209ENST00000470026 ZNF451Q9Y4E5 1061 aa13.1□□□□□ -0.31
BRCA1-209ENST00000470026 KCNE2Q9Y6J6 123 aa13.1□□□□□ -0.31
BRCA1-209ENST00000470026 LTBP2Q14767 1821 aa13.1□□□□□ -0.31
BRCA1-209ENST00000470026 GPR37L1O60883 481 aa13.1□□□□□ -0.31
BRCA1-209ENST00000470026 AOC2O75106 756 aa13.1□□□□□ -0.31
BRCA1-209ENST00000470026 FURINP09958 794 aa13.1□□□□□ -0.31
BRCA1-209ENST00000470026 ITGA2P17301 1181 aa13.1□□□□□ -0.31
BRCA1-209ENST00000470026 PREPP48147 710 aa13.1□□□□□ -0.31
BRCA1-209ENST00000470026 CLK1P49759 484 aaKnown RBP13.1□□□□□ -0.31
BRCA1-209ENST00000470026 PCBP3P57721 371 aaKnown RBP13.1□□□□□ -0.31
BRCA1-209ENST00000470026 SCARB2Q14108 478 aa13.1□□□□□ -0.31
BRCA1-209ENST00000470026 SYTL3Q4VX76 610 aa13.1□□□□□ -0.31
BRCA1-209ENST00000470026 NCCRP1Q6ZVX7 275 aaPredicted RBP13.1□□□□□ -0.31
BRCA1-209ENST00000470026 DPPA4Q7L190 304 aa13.1□□□□□ -0.31
BRCA1-209ENST00000470026 ANKRD33Q7Z3H0 272 aa13.1□□□□□ -0.31
BRCA1-209ENST00000470026 LYSMD2Q8IV50 215 aa13.1□□□□□ -0.31
BRCA1-209ENST00000470026 GLYATL1Q969I3 302 aa13.1□□□□□ -0.31
BRCA1-209ENST00000470026 NIPSNAP1Q9BPW8 284 aa13.1□□□□□ -0.31
BRCA1-209ENST00000470026 SMG9Q9H0W8 520 aaKnown RBP13.1□□□□□ -0.31
BRCA1-209ENST00000470026 EPHX3Q9H6B9 360 aa13.1□□□□□ -0.31
BRCA1-209ENST00000470026 ZBTB20Q9HC78 741 aaPredicted RBP13.1□□□□□ -0.31
BRCA1-209ENST00000470026 CPNE5Q9HCH3 593 aa13.1□□□□□ -0.31
BRCA1-209ENST00000470026 MYNNQ9NPC7 610 aa13.1□□□□□ -0.31
BRCA1-209ENST00000470026 DOCK6Q96HP0 2047 aa13.1□□□□□ -0.31
BRCA1-209ENST00000470026 ARRDC5A6NEK1 342 aa13.09□□□□□ -0.31
BRCA1-209ENST00000470026 AGAP5A6NIR3 686 aa13.09□□□□□ -0.31
BRCA1-209ENST00000470026 SAGE2PA6NJ88 616 aa13.09□□□□□ -0.31
BRCA1-209ENST00000470026 DSCR3O14972 297 aa13.09□□□□□ -0.31
BRCA1-209ENST00000470026 ADORA3P0DMS8 318 aa13.09□□□□□ -0.31
BRCA1-209ENST00000470026 POLR2EP19388 210 aaKnown RBP13.09□□□□□ -0.31
BRCA1-209ENST00000470026 GRK5P34947 590 aa13.09□□□□□ -0.31
BRCA1-209ENST00000470026 RPL3P39023 403 aaKnown RBP13.09□□□□□ -0.31
BRCA1-209ENST00000470026 CRATP43155 626 aa13.09□□□□□ -0.31
BRCA1-209ENST00000470026 XCR1P46094 333 aa13.09□□□□□ -0.31
BRCA1-209ENST00000470026 FPGSQ05932 587 aa13.09□□□□□ -0.31
BRCA1-209ENST00000470026 DNASE1L3Q13609 305 aa13.09□□□□□ -0.31
BRCA1-209ENST00000470026 EXOC3L2Q2M3D2 409 aa13.09□□□□□ -0.31
BRCA1-209ENST00000470026 ZNF181Q2M3W8 571 aa13.09□□□□□ -0.31
BRCA1-209ENST00000470026 TMEM215Q68D42 235 aa13.09□□□□□ -0.31
BRCA1-209ENST00000470026 FAM71E1Q6IPT2 247 aa13.09□□□□□ -0.31
BRCA1-209ENST00000470026 C19orf48Q6RUI8 117 aa13.09□□□□□ -0.31
BRCA1-209ENST00000470026 OTOP2Q7RTS6 562 aa13.09□□□□□ -0.31
BRCA1-209ENST00000470026 SLC22A16Q86VW1 577 aa13.09□□□□□ -0.31
BRCA1-209ENST00000470026 LGI4Q8N135 537 aa13.09□□□□□ -0.31
BRCA1-209ENST00000470026 OXR1Q8N573 874 aa13.09□□□□□ -0.31
BRCA1-209ENST00000470026 ZNF557Q8N988 423 aaPredicted RBP13.09□□□□□ -0.31
BRCA1-209ENST00000470026 GPR156Q8NFN8 814 aa13.09□□□□□ -0.31
BRCA1-209ENST00000470026 ZNF675Q8TD23 568 aa13.09□□□□□ -0.31
BRCA1-209ENST00000470026 ZNF480Q8WV37 535 aa13.09□□□□□ -0.31
BRCA1-209ENST00000470026 MRGPRX3Q96LB0 322 aa13.09□□□□□ -0.31
BRCA1-209ENST00000470026 SLC35A5Q9BS91 424 aa13.09□□□□□ -0.31
BRCA1-209ENST00000470026 CDADC1Q9BWV3 514 aa13.09□□□□□ -0.31
BRCA1-209ENST00000470026 SGPP1Q9BX95 441 aa13.09□□□□□ -0.31
BRCA1-209ENST00000470026 ACER3Q9NUN7 267 aa13.09□□□□□ -0.31
BRCA1-209ENST00000470026 ANKMY1Q9P2S6 941 aa13.09□□□□□ -0.31
BRCA1-209ENST00000470026 DKK3Q9UBP4 350 aa13.09□□□□□ -0.31
BRCA1-209ENST00000470026 GULP1Q9UBP9 304 aa13.09□□□□□ -0.31
BRCA1-209ENST00000470026 PNMA8BQ9ULN7 279 aaPredicted RBP13.09□□□□□ -0.31
BRCA1-209ENST00000470026 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.09□□□□□ -0.31
BRCA1-209ENST00000470026 CCL26Q9Y258 94 aa13.09□□□□□ -0.31
BRCA1-209ENST00000470026 TRIM17Q9Y577 477 aa13.09□□□□□ -0.31
BRCA1-209ENST00000470026 GNG14A0A1W2PPG7 69 aa13.09□□□□□ -0.31
BRCA1-209ENST00000470026 LEFTY1O75610 366 aa13.09□□□□□ -0.31
BRCA1-209ENST00000470026 C1orf105O95561 183 aa13.09□□□□□ -0.31
BRCA1-209ENST00000470026 C6orf47O95873 294 aa13.09□□□□□ -0.31
BRCA1-209ENST00000470026 LRG1P02750 347 aa13.09□□□□□ -0.31
BRCA1-209ENST00000470026 OPN1SWP03999 348 aa13.09□□□□□ -0.31
BRCA1-209ENST00000470026 RPLP0P05388 317 aaKnown RBP13.09□□□□□ -0.31
BRCA1-209ENST00000470026 NPPBP16860 134 aa13.09□□□□□ -0.31
BRCA1-209ENST00000470026 TNFRSF1BP20333 461 aa13.09□□□□□ -0.31
BRCA1-209ENST00000470026 RECQLP46063 649 aaPredicted RBP13.09□□□□□ -0.31
BRCA1-209ENST00000470026 SPIBQ01892 262 aa13.09□□□□□ -0.31
BRCA1-209ENST00000470026 ZNF630Q2M218 657 aaPredicted RBP13.09□□□□□ -0.31
BRCA1-209ENST00000470026 ZNF284Q2VY69 593 aa13.09□□□□□ -0.31
BRCA1-209ENST00000470026 COMMD6Q7Z4G1 85 aa13.09□□□□□ -0.31
BRCA1-209ENST00000470026 ARMC8Q8IUR7 673 aa13.09□□□□□ -0.31
BRCA1-209ENST00000470026 OR4K1Q8NGD4 311 aa13.09□□□□□ -0.31
BRCA1-209ENST00000470026 HCAR2Q8TDS4 363 aa13.09□□□□□ -0.31
BRCA1-209ENST00000470026 GEMIN6Q8WXD5 167 aaKnown RBP13.09□□□□□ -0.31
BRCA1-209ENST00000470026 MTERF3Q96E29 417 aa13.09□□□□□ -0.31
BRCA1-209ENST00000470026 CRELD1Q96HD1 420 aa13.09□□□□□ -0.31
BRCA1-209ENST00000470026 EFCAB11Q9BUY7 163 aa13.09□□□□□ -0.31
BRCA1-209ENST00000470026 DMRT3Q9NQL9 472 aa13.09□□□□□ -0.31
BRCA1-209ENST00000470026 TSC22D4Q9Y3Q8 395 aa13.09□□□□□ -0.31
BRCA1-209ENST00000470026 KLK4Q9Y5K2 254 aa13.09□□□□□ -0.31
BRCA1-209ENST00000470026 NEDD8-MDP1E9PL57 170 aa13.08□□□□□ -0.32
BRCA1-209ENST00000470026 CTSLP07711 333 aa13.08□□□□□ -0.32
BRCA1-209ENST00000470026 ARAFP10398 606 aa13.08□□□□□ -0.32
BRCA1-209ENST00000470026 CBLP22681 906 aa13.08□□□□□ -0.32
BRCA1-209ENST00000470026 PDHA2P29803 388 aa13.08□□□□□ -0.32
BRCA1-209ENST00000470026 EIF2B2P49770 351 aaKnown RBP13.08□□□□□ -0.32
BRCA1-209ENST00000470026 CDH12P55289 794 aa13.08□□□□□ -0.32
BRCA1-209ENST00000470026 PRKCDQ05655 676 aa13.08□□□□□ -0.32
BRCA1-209ENST00000470026 TMEM115Q12893 351 aaPredicted RBP13.08□□□□□ -0.32
BRCA1-209ENST00000470026 ARSIQ5FYB1 569 aa13.08□□□□□ -0.32
BRCA1-209ENST00000470026 TMPRSS11BQ86T26 416 aa13.08□□□□□ -0.32
BRCA1-209ENST00000470026 LRRC56Q8IYG6 542 aaPredicted RBP13.08□□□□□ -0.32
BRCA1-209ENST00000470026 AMER2Q8N7J2 671 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms