RNA–Protein interactions for RNA: ENST00000469163.1

NUP50-214, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 3,507 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-214ENST00000469163 WRAP53Q9BUR4 548 aaKnown RBP9.6□□□□□ -0.87
NUP50-214ENST00000469163 MMP27Q9H306 513 aa9.6□□□□□ -0.87
NUP50-214ENST00000469163 CASS4Q9NQ75 786 aa9.6□□□□□ -0.87
NUP50-214ENST00000469163 SCML2Q9UQR0 700 aa9.6□□□□□ -0.87
NUP50-214ENST00000469163 SMAD6O43541 496 aaKnown RBP9.59□□□□□ -0.87
NUP50-214ENST00000469163 SNNO75324 88 aaPredicted RBP9.59□□□□□ -0.87
NUP50-214ENST00000469163 PDE9AO76083 593 aa9.59□□□□□ -0.87
NUP50-214ENST00000469163 C1QBP02746 253 aa9.59□□□□□ -0.87
NUP50-214ENST00000469163 DNTTP04053 509 aa9.59□□□□□ -0.87
NUP50-214ENST00000469163 POLBP06746 335 aa9.59□□□□□ -0.87
NUP50-214ENST00000469163 ITGAVP06756 1048 aa9.59□□□□□ -0.87
NUP50-214ENST00000469163 CHRM3P20309 590 aa9.59□□□□□ -0.87
NUP50-214ENST00000469163 ZP3P21754 424 aa9.59□□□□□ -0.87
NUP50-214ENST00000469163 NMBRP28336 390 aa9.59□□□□□ -0.87
NUP50-214ENST00000469163 AKT1P31749 480 aa9.59□□□□□ -0.87
NUP50-214ENST00000469163 HNMTP50135 292 aa9.59□□□□□ -0.87
NUP50-214ENST00000469163 GNG10P50151 68 aa9.59□□□□□ -0.87
NUP50-214ENST00000469163 RAC1P63000 192 aa9.59□□□□□ -0.87
NUP50-214ENST00000469163 TNK1Q13470 666 aa9.59□□□□□ -0.87
NUP50-214ENST00000469163 ANKS6Q68DC2 871 aa9.59□□□□□ -0.87
NUP50-214ENST00000469163 FAM92BQ6ZTR7 304 aa9.59□□□□□ -0.87
NUP50-214ENST00000469163 RRM2BQ7LG56 351 aa9.59□□□□□ -0.87
NUP50-214ENST00000469163 EPHX4Q8IUS5 362 aa9.59□□□□□ -0.87
NUP50-214ENST00000469163 DPP10Q8N608 796 aa9.59□□□□□ -0.87
NUP50-214ENST00000469163 ZNF248Q8NDW4 579 aa9.59□□□□□ -0.87
NUP50-214ENST00000469163 DTD1Q8TEA8 209 aa9.59□□□□□ -0.87
NUP50-214ENST00000469163 ESAMQ96AP7 390 aa9.59□□□□□ -0.87
NUP50-214ENST00000469163 ARMC5Q96C12 935 aa9.59□□□□□ -0.87
NUP50-214ENST00000469163 TRMT61AQ96FX7 289 aaKnown RBP9.59□□□□□ -0.87
NUP50-214ENST00000469163 DCLRE1CQ96SD1 692 aaKnown RBP9.59□□□□□ -0.87
NUP50-214ENST00000469163 NIPAL2Q9H841 368 aa9.59□□□□□ -0.87
NUP50-214ENST00000469163 ASXL3Q9C0F0 2248 aa9.59□□□□□ -0.87
NUP50-214ENST00000469163 PNMA8CA0A1B0GUJ8 204 aa9.59□□□□□ -0.87
NUP50-214ENST00000469163 LOC390937A0A1W2PQ73 354 aa9.59□□□□□ -0.87
NUP50-214ENST00000469163 LGALS8O00214 317 aa9.59□□□□□ -0.87
NUP50-214ENST00000469163 GSTA4O15217 222 aa9.59□□□□□ -0.87
NUP50-214ENST00000469163 INPP4BO15327 924 aa9.59□□□□□ -0.87
NUP50-214ENST00000469163 AKAP8O43823 692 aaKnown RBP9.59□□□□□ -0.87
NUP50-214ENST00000469163 HPGDSO60760 199 aa9.59□□□□□ -0.87
NUP50-214ENST00000469163 CDC123O75794 336 aaPredicted RBP9.59□□□□□ -0.87
NUP50-214ENST00000469163 PGLSO95336 258 aa9.59□□□□□ -0.87
NUP50-214ENST00000469163 ASGR2P07307 311 aa9.59□□□□□ -0.87
NUP50-214ENST00000469163 SERPINF2P08697 491 aa9.59□□□□□ -0.87
NUP50-214ENST00000469163 TRAPPC2P0DI81 140 aa9.59□□□□□ -0.87
NUP50-214ENST00000469163 TRAPPC2BP0DI82 140 aa9.59□□□□□ -0.87
NUP50-214ENST00000469163 RRASP10301 218 aa9.59□□□□□ -0.87
NUP50-214ENST00000469163 NDUFB7P17568 137 aa9.59□□□□□ -0.87
NUP50-214ENST00000469163 GPX4P36969 197 aaPredicted RBP9.59□□□□□ -0.87
NUP50-214ENST00000469163 ETV5P41161 510 aa9.59□□□□□ -0.87
NUP50-214ENST00000469163 GNPDA1P46926 289 aa9.59□□□□□ -0.87
NUP50-214ENST00000469163 PXNP49023 591 aaPredicted RBP9.59□□□□□ -0.87
NUP50-214ENST00000469163 RENBPP51606 427 aa9.59□□□□□ -0.87
NUP50-214ENST00000469163 ST8SIA6P61647 398 aa9.59□□□□□ -0.87
NUP50-214ENST00000469163 MPP1Q00013 466 aa9.59□□□□□ -0.87
NUP50-214ENST00000469163 FNDC3BQ53EP0 1204 aaKnown RBP9.59□□□□□ -0.87
NUP50-214ENST00000469163 CYBRD1Q53TN4 286 aa9.59□□□□□ -0.87
NUP50-214ENST00000469163 VASNQ6EMK4 673 aa9.59□□□□□ -0.87
NUP50-214ENST00000469163 CLEC2AQ6UVW9 174 aa9.59□□□□□ -0.87
NUP50-214ENST00000469163 TFAP2EQ6VUC0 442 aa9.59□□□□□ -0.87
NUP50-214ENST00000469163 NUDT18Q6ZVK8 323 aa9.59□□□□□ -0.87
NUP50-214ENST00000469163 HTR3DQ70Z44 454 aa9.59□□□□□ -0.87
NUP50-214ENST00000469163 OXR1Q8N573 874 aa9.59□□□□□ -0.87
NUP50-214ENST00000469163 PACRGLQ8N7B6 248 aa9.59□□□□□ -0.87
NUP50-214ENST00000469163 MRPL43Q8N983 215 aaKnown RBP9.59□□□□□ -0.87
NUP50-214ENST00000469163 IL17RCQ8NAC3 791 aa9.59□□□□□ -0.87
NUP50-214ENST00000469163 OR13C4Q8NGS5 318 aa9.59□□□□□ -0.87
NUP50-214ENST00000469163 WDR36Q8NI36 951 aaKnown RBP9.59□□□□□ -0.87
NUP50-214ENST00000469163 POC1BQ8TC44 478 aa9.59□□□□□ -0.87
NUP50-214ENST00000469163 SPPL3Q8TCT6 385 aa9.59□□□□□ -0.87
NUP50-214ENST00000469163 HDAC10Q969S8 669 aa9.59□□□□□ -0.87
NUP50-214ENST00000469163 PHF21BQ96EK2 531 aa9.59□□□□□ -0.87
NUP50-214ENST00000469163 FRMD6Q96NE9 622 aa9.59□□□□□ -0.87
NUP50-214ENST00000469163 SHARPINQ9H0F6 387 aa9.59□□□□□ -0.87
NUP50-214ENST00000469163 ELAC1Q9H777 363 aaKnown RBP9.59□□□□□ -0.87
NUP50-214ENST00000469163 OPTCQ9UBM4 332 aa9.59□□□□□ -0.87
NUP50-214ENST00000469163 MBD1Q9UIS9 605 aaPredicted RBP9.59□□□□□ -0.87
NUP50-214ENST00000469163 PDE10AQ9Y233 779 aa9.59□□□□□ -0.87
NUP50-214ENST00000469163 USP34Q70CQ2 3546 aa9.59□□□□□ -0.87
NUP50-214ENST00000469163 CHD5Q8TDI0 1954 aa9.59□□□□□ -0.87
NUP50-214ENST00000469163 EFCAB9A8MZ26 197 aa9.59□□□□□ -0.88
NUP50-214ENST00000469163 TEX46H3BTG2 121 aa9.59□□□□□ -0.88
NUP50-214ENST00000469163 LEFTY2O00292 366 aa9.59□□□□□ -0.88
NUP50-214ENST00000469163 TNFRSF10BO14763 440 aa9.59□□□□□ -0.88
NUP50-214ENST00000469163 RASGRP1O95267 797 aa9.59□□□□□ -0.88
NUP50-214ENST00000469163 AGR2O95994 175 aa9.59□□□□□ -0.88
NUP50-214ENST00000469163 MT-ND1P03886 318 aa9.59□□□□□ -0.88
NUP50-214ENST00000469163 ACSM4P0C7M7 580 aa9.59□□□□□ -0.88
NUP50-214ENST00000469163 BMP2P12643 396 aa9.59□□□□□ -0.88
NUP50-214ENST00000469163 CEBPBP17676 345 aa9.59□□□□□ -0.88
NUP50-214ENST00000469163 CRHR1P34998 444 aa9.59□□□□□ -0.88
NUP50-214ENST00000469163 LIMK1P53667 647 aa9.59□□□□□ -0.88
NUP50-214ENST00000469163 KCNJ10P78508 379 aa9.59□□□□□ -0.88
NUP50-214ENST00000469163 DEFA5Q01523 94 aa9.59□□□□□ -0.88
NUP50-214ENST00000469163 KCNC3Q14003 757 aa9.59□□□□□ -0.88
NUP50-214ENST00000469163 HFEQ30201 348 aa9.59□□□□□ -0.88
NUP50-214ENST00000469163 MANEALQ5VSG8 457 aa9.59□□□□□ -0.88
NUP50-214ENST00000469163 CES5AQ6NT32 575 aa9.59□□□□□ -0.88
NUP50-214ENST00000469163 FAM151BQ6UXP7 276 aa9.59□□□□□ -0.88
NUP50-214ENST00000469163 SERPINA13PQ6UXR4 307 aa9.59□□□□□ -0.88
NUP50-214ENST00000469163 MAVSQ7Z434 540 aa9.59□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms