RNA–Protein interactions for RNA: ENST00000468963.1

SDCCAG3-209, Transcript of Serologically defined colon cancer antigen 3, humanhuman

TSL 2

Gene SDCCAG3, Length 686 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-209ENST00000468963 HNRNPRO43390 633 aaKnown RBP13.87□□□□□ -0.19
SDCCAG3-209ENST00000468963 PRMT3O60678 531 aa13.87□□□□□ -0.19
SDCCAG3-209ENST00000468963 WISP3O95389 354 aaPredicted RBP13.87□□□□□ -0.19
SDCCAG3-209ENST00000468963 SP1P08047 785 aa13.87□□□□□ -0.19
SDCCAG3-209ENST00000468963 HNF4AP41235 474 aa13.87□□□□□ -0.19
SDCCAG3-209ENST00000468963 RPL21P46778 160 aaKnown RBP13.87□□□□□ -0.19
SDCCAG3-209ENST00000468963 SLC6A12P48065 614 aa13.87□□□□□ -0.19
SDCCAG3-209ENST00000468963 HNMTP50135 292 aa13.87□□□□□ -0.19
SDCCAG3-209ENST00000468963 GNG11P61952 73 aa13.87□□□□□ -0.19
SDCCAG3-209ENST00000468963 PDIA2Q13087 525 aaKnown RBP13.87□□□□□ -0.19
SDCCAG3-209ENST00000468963 RBBP5Q15291 538 aaKnown RBP13.87□□□□□ -0.19
SDCCAG3-209ENST00000468963 KRTCAP3Q53RY4 240 aa13.87□□□□□ -0.19
SDCCAG3-209ENST00000468963 SLC25A25Q6KCM7 469 aa13.87□□□□□ -0.19
SDCCAG3-209ENST00000468963 SLCO4C1Q6ZQN7 724 aa13.87□□□□□ -0.19
SDCCAG3-209ENST00000468963 ZNF227Q86WZ6 799 aa13.87□□□□□ -0.19
SDCCAG3-209ENST00000468963 KIF2BQ8N4N8 673 aa13.87□□□□□ -0.19
SDCCAG3-209ENST00000468963 SLC5A8Q8N695 610 aa13.87□□□□□ -0.19
SDCCAG3-209ENST00000468963 THAP3Q8WTV1 239 aaPredicted RBP13.87□□□□□ -0.19
SDCCAG3-209ENST00000468963 RHBDF1Q96CC6 855 aa13.87□□□□□ -0.19
SDCCAG3-209ENST00000468963 CCDC120Q96HB5 630 aa13.87□□□□□ -0.19
SDCCAG3-209ENST00000468963 TRIM45Q9H8W5 580 aaPredicted RBP13.87□□□□□ -0.19
SDCCAG3-209ENST00000468963 NECTIN3Q9NQS3 549 aa13.87□□□□□ -0.19
SDCCAG3-209ENST00000468963 KLHL1Q9NR64 748 aa13.87□□□□□ -0.19
SDCCAG3-209ENST00000468963 SMYD2Q9NRG4 433 aa13.87□□□□□ -0.19
SDCCAG3-209ENST00000468963 ZNF835Q9Y2P0 537 aa13.87□□□□□ -0.19
SDCCAG3-209ENST00000468963 SNX24Q9Y343 169 aa13.87□□□□□ -0.19
SDCCAG3-209ENST00000468963 FBN2P35556 2912 aa13.87□□□□□ -0.19
SDCCAG3-209ENST00000468963 TCRBV16S1A1N1A0A5B0 115 aa13.86□□□□□ -0.19
SDCCAG3-209ENST00000468963 EFCAB8A8MWE9 144 aa13.86□□□□□ -0.19
SDCCAG3-209ENST00000468963 NDC80O14777 642 aa13.86□□□□□ -0.19
SDCCAG3-209ENST00000468963 C1GALT1C1LP0DN25 315 aa13.86□□□□□ -0.19
SDCCAG3-209ENST00000468963 RNH1P13489 461 aaKnown RBP13.86□□□□□ -0.19
SDCCAG3-209ENST00000468963 PRF1P14222 555 aa13.86□□□□□ -0.19
SDCCAG3-209ENST00000468963 CD46P15529 392 aa13.86□□□□□ -0.19
SDCCAG3-209ENST00000468963 GDF5P43026 501 aa13.86□□□□□ -0.19
SDCCAG3-209ENST00000468963 MLF1P58340 268 aa13.86□□□□□ -0.19
SDCCAG3-209ENST00000468963 TAS2R50P59544 299 aa13.86□□□□□ -0.19
SDCCAG3-209ENST00000468963 RBPJQ06330 500 aa13.86□□□□□ -0.19
SDCCAG3-209ENST00000468963 RUNX2Q13950 521 aa13.86□□□□□ -0.19
SDCCAG3-209ENST00000468963 TSNQ15631 228 aaKnown RBP13.86□□□□□ -0.19
SDCCAG3-209ENST00000468963 C18orf21Q32NC0 220 aaPredicted RBP13.86□□□□□ -0.19
SDCCAG3-209ENST00000468963 MRGPRGQ86SM5 289 aa13.86□□□□□ -0.19
SDCCAG3-209ENST00000468963 TMPRSS11BQ86T26 416 aa13.86□□□□□ -0.19
SDCCAG3-209ENST00000468963 SIAH3Q8IW03 269 aa13.86□□□□□ -0.19
SDCCAG3-209ENST00000468963 CYP4X1Q8N118 509 aa13.86□□□□□ -0.19
SDCCAG3-209ENST00000468963 CA13Q8N1Q1 262 aa13.86□□□□□ -0.19
SDCCAG3-209ENST00000468963 ARMC10Q8N2F6 343 aa13.86□□□□□ -0.19
SDCCAG3-209ENST00000468963 MARVELD3Q96A59 401 aa13.86□□□□□ -0.19
SDCCAG3-209ENST00000468963 GPR137Q96N19 417 aa13.86□□□□□ -0.19
SDCCAG3-209ENST00000468963 TRIM31Q9BZY9 425 aa13.86□□□□□ -0.19
SDCCAG3-209ENST00000468963 RHOJQ9H4E5 214 aa13.86□□□□□ -0.19
SDCCAG3-209ENST00000468963 PRDM9Q9NQV7 894 aa13.86□□□□□ -0.19
SDCCAG3-209ENST00000468963 LRFN1Q9P244 771 aa13.86□□□□□ -0.19
SDCCAG3-209ENST00000468963 CTNNAL1Q9UBT7 734 aa13.86□□□□□ -0.19
SDCCAG3-209ENST00000468963 KLF2Q9Y5W3 355 aaPredicted RBP13.86□□□□□ -0.19
SDCCAG3-209ENST00000468963 ARHGAP10A1A4S6 786 aa13.85□□□□□ -0.19
SDCCAG3-209ENST00000468963 SAGE2PA6NJ88 616 aa13.85□□□□□ -0.19
SDCCAG3-209ENST00000468963 PRSS44E7EML9 344 aa13.85□□□□□ -0.19
SDCCAG3-209ENST00000468963 SLC19A2O60779 497 aa13.85□□□□□ -0.19
SDCCAG3-209ENST00000468963 H2AFYO75367 372 aaKnown RBP13.85□□□□□ -0.19
SDCCAG3-209ENST00000468963 PIAS1O75925 651 aa13.85□□□□□ -0.19
SDCCAG3-209ENST00000468963 GNAZP19086 355 aa13.85□□□□□ -0.19
SDCCAG3-209ENST00000468963 MAOAP21397 527 aa13.85□□□□□ -0.19
SDCCAG3-209ENST00000468963 GRNP28799 593 aaKnown RBP13.85□□□□□ -0.19
SDCCAG3-209ENST00000468963 TPP2P29144 1249 aaPredicted RBP13.85□□□□□ -0.19
SDCCAG3-209ENST00000468963 EEF1DP29692 281 aaKnown RBP13.85□□□□□ -0.19
SDCCAG3-209ENST00000468963 TRHRP34981 398 aaPredicted RBP13.85□□□□□ -0.19
SDCCAG3-209ENST00000468963 GGT5P36269 586 aa13.85□□□□□ -0.19
SDCCAG3-209ENST00000468963 ALDH6A1Q02252 535 aaKnown RBP13.85□□□□□ -0.19
SDCCAG3-209ENST00000468963 OC90Q02509 493 aaPredicted RBP13.85□□□□□ -0.19
SDCCAG3-209ENST00000468963 C3AR1Q16581 482 aa13.85□□□□□ -0.19
SDCCAG3-209ENST00000468963 TOR1AIP1Q5JTV8 583 aa13.85□□□□□ -0.19
SDCCAG3-209ENST00000468963 MTFR2Q6P444 385 aa13.85□□□□□ -0.19
SDCCAG3-209ENST00000468963 Q6ZPB1 254 aaPredicted RBP13.85□□□□□ -0.19
SDCCAG3-209ENST00000468963 GALNTL5Q7Z4T8 443 aa13.85□□□□□ -0.19
SDCCAG3-209ENST00000468963 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.85□□□□□ -0.19
SDCCAG3-209ENST00000468963 ADAMTSL2Q86TH1 951 aa13.85□□□□□ -0.19
SDCCAG3-209ENST00000468963 ZNF808Q8N4W9 903 aaPredicted RBP13.85□□□□□ -0.19
SDCCAG3-209ENST00000468963 HORMAD2Q8N7B1 307 aa13.85□□□□□ -0.19
SDCCAG3-209ENST00000468963 TMEM178AQ8NBL3 297 aa13.85□□□□□ -0.19
SDCCAG3-209ENST00000468963 ADAMTS18Q8TE60 1221 aa13.85□□□□□ -0.19
SDCCAG3-209ENST00000468963 FRMD6Q96NE9 622 aa13.85□□□□□ -0.19
SDCCAG3-209ENST00000468963 NAPGQ99747 312 aaPredicted RBP13.85□□□□□ -0.19
SDCCAG3-209ENST00000468963 EGFL8Q99944 293 aa13.85□□□□□ -0.19
SDCCAG3-209ENST00000468963 NT5DC2Q9H857 520 aa13.85□□□□□ -0.19
SDCCAG3-209ENST00000468963 POPDC3Q9HBV1 291 aa13.85□□□□□ -0.19
SDCCAG3-209ENST00000468963 GPAMQ9HCL2 828 aa13.85□□□□□ -0.19
SDCCAG3-209ENST00000468963 NSMCE4AQ9NXX6 385 aa13.85□□□□□ -0.19
SDCCAG3-209ENST00000468963 RNF14Q9UBS8 474 aa13.85□□□□□ -0.19
SDCCAG3-209ENST00000468963 SUCOQ9UBS9 1254 aaKnown RBP13.85□□□□□ -0.19
SDCCAG3-209ENST00000468963 MTO1Q9Y2Z2 717 aaKnown RBP13.85□□□□□ -0.19
SDCCAG3-209ENST00000468963 CLDN16Q9Y5I7 305 aa13.85□□□□□ -0.19
SDCCAG3-209ENST00000468963 ADGRG4Q8IZF6 3080 aa13.85□□□□□ -0.19
SDCCAG3-209ENST00000468963 PDZD2O15018 2839 aa13.85□□□□□ -0.19
SDCCAG3-209ENST00000468963 AKAP9Q99996 3911 aa13.84□□□□□ -0.19
SDCCAG3-209ENST00000468963 LRIT2A6NDA9 550 aa13.84□□□□□ -0.19
SDCCAG3-209ENST00000468963 A8MUA0 341 aa13.84□□□□□ -0.19
SDCCAG3-209ENST00000468963 CXorf49A8MYA2 514 aaPredicted RBP13.84□□□□□ -0.19
SDCCAG3-209ENST00000468963 NPIPA5E9PKD4 350 aa13.84□□□□□ -0.19
SDCCAG3-209ENST00000468963 PSMD12O00232 456 aaPredicted RBP13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms