RNA–Protein interactions for RNA: ENST00000468653.5

SMC4-209, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,756 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-209ENST00000468653 MTERF3Q96E29 417 aa18.09■□□□□ 0.49
SMC4-209ENST00000468653 LRGUKQ96M69 825 aa18.09■□□□□ 0.49
SMC4-209ENST00000468653 C17orf62Q9BQA9 187 aa18.09■□□□□ 0.49
SMC4-209ENST00000468653 DDX31Q9H8H2 851 aaKnown RBP18.09■□□□□ 0.49
SMC4-209ENST00000468653 LHX9Q9NQ69 397 aa18.09■□□□□ 0.49
SMC4-209ENST00000468653 MIEF1Q9NQG6 463 aa18.09■□□□□ 0.49
SMC4-209ENST00000468653 UCKL1Q9NWZ5 548 aa18.09■□□□□ 0.49
SMC4-209ENST00000468653 ANGPTL2Q9UKU9 493 aa18.09■□□□□ 0.49
SMC4-209ENST00000468653 WBP11Q9Y2W2 641 aaKnown RBP18.09■□□□□ 0.49
SMC4-209ENST00000468653 NEUROG3Q9Y4Z2 214 aa18.09■□□□□ 0.49
SMC4-209ENST00000468653 GOLGA4Q13439 2230 aaKnown RBP18.09■□□□□ 0.49
SMC4-209ENST00000468653 A0A0G2JN53 185 aa18.09■□□□□ 0.49
SMC4-209ENST00000468653 A0A0J9YY10 115 aa18.09■□□□□ 0.49
SMC4-209ENST00000468653 A0A1B0GTW7 788 aa18.09■□□□□ 0.49
SMC4-209ENST00000468653 PRSS51A0A1B0GVH4 220 aa18.09■□□□□ 0.49
SMC4-209ENST00000468653 NVLO15381 856 aaKnown RBP18.09■□□□□ 0.49
SMC4-209ENST00000468653 ERI3O43414 337 aaKnown RBP18.09■□□□□ 0.49
SMC4-209ENST00000468653 DNAJA2O60884 412 aa18.09■□□□□ 0.49
SMC4-209ENST00000468653 SCN2BO60939 215 aa18.09■□□□□ 0.49
SMC4-209ENST00000468653 CPSF4O95639 269 aaKnown RBP18.09■□□□□ 0.49
SMC4-209ENST00000468653 BAG2O95816 211 aa18.09■□□□□ 0.49
SMC4-209ENST00000468653 CDKN2CP42773 168 aa18.09■□□□□ 0.49
SMC4-209ENST00000468653 SESN3P58005 492 aa18.09■□□□□ 0.49
SMC4-209ENST00000468653 STXBP1P61764 594 aaKnown RBP18.09■□□□□ 0.49
SMC4-209ENST00000468653 ADPRMQ3LIE5 342 aa18.09■□□□□ 0.49
SMC4-209ENST00000468653 PMS2CLQ68D20 193 aa18.09■□□□□ 0.49
SMC4-209ENST00000468653 FCRL6Q6DN72 434 aa18.09■□□□□ 0.49
SMC4-209ENST00000468653 FBXO42Q6P3S6 717 aa18.09■□□□□ 0.49
SMC4-209ENST00000468653 KLHL35Q6PF15 583 aa18.09■□□□□ 0.49
SMC4-209ENST00000468653 RSC1A1Q92681 617 aa18.09■□□□□ 0.49
SMC4-209ENST00000468653 MS4A6EQ96DS6 147 aa18.09■□□□□ 0.49
SMC4-209ENST00000468653 RSRC1Q96IZ7 334 aaKnown RBP18.09■□□□□ 0.49
SMC4-209ENST00000468653 FCRL4Q96PJ5 515 aa18.09■□□□□ 0.49
SMC4-209ENST00000468653 LDHAL6BQ9BYZ2 381 aaPredicted RBP18.09■□□□□ 0.49
SMC4-209ENST00000468653 BHLHE41Q9C0J9 482 aaPredicted RBP18.09■□□□□ 0.49
SMC4-209ENST00000468653 AICDAQ9GZX7 198 aa18.09■□□□□ 0.49
SMC4-209ENST00000468653 PIF1Q9H611 641 aa18.09■□□□□ 0.49
SMC4-209ENST00000468653 ERVMER34-1Q9H9K5 563 aa18.09■□□□□ 0.49
SMC4-209ENST00000468653 SLC6A13Q9NSD5 602 aa18.09■□□□□ 0.49
SMC4-209ENST00000468653 EGFL7Q9UHF1 273 aa18.09■□□□□ 0.49
SMC4-209ENST00000468653 SDK1Q7Z5N4 2213 aa18.08■□□□□ 0.49
SMC4-209ENST00000468653 CROCCQ5TZA2 2017 aa18.08■□□□□ 0.49
SMC4-209ENST00000468653 TRBV5-3A0A0A0MS03 114 aa18.08■□□□□ 0.48
SMC4-209ENST00000468653 UBXN7O94888 489 aa18.08■□□□□ 0.48
SMC4-209ENST00000468653 ANPEPP15144 967 aa18.08■□□□□ 0.48
SMC4-209ENST00000468653 PVRP15151 417 aa18.08■□□□□ 0.48
SMC4-209ENST00000468653 EFNA1P20827 205 aaPredicted RBP18.08■□□□□ 0.48
SMC4-209ENST00000468653 HNRNPFP52597 415 aaKnown RBP18.08■□□□□ 0.48
SMC4-209ENST00000468653 SLC34A1Q06495 639 aa18.08■□□□□ 0.48
SMC4-209ENST00000468653 RGS1Q08116 209 aa18.08■□□□□ 0.48
SMC4-209ENST00000468653 HYAL2Q12891 473 aa18.08■□□□□ 0.48
SMC4-209ENST00000468653 PDE7AQ13946 482 aa18.08■□□□□ 0.48
SMC4-209ENST00000468653 ZNF385BQ569K4 471 aa18.08■□□□□ 0.48
SMC4-209ENST00000468653 TRIM40Q6P9F5 258 aa18.08■□□□□ 0.48
SMC4-209ENST00000468653 CYP2R1Q6VVX0 501 aa18.08■□□□□ 0.48
SMC4-209ENST00000468653 ASPGQ86U10 573 aa18.08■□□□□ 0.48
SMC4-209ENST00000468653 CLECL1Q8IZS7 167 aa18.08■□□□□ 0.48
SMC4-209ENST00000468653 SRFBP1Q8NEF9 429 aaKnown RBP18.08■□□□□ 0.48
SMC4-209ENST00000468653 OR2L5Q8NG80 312 aa18.08■□□□□ 0.48
SMC4-209ENST00000468653 TM4SF18Q96CE8 201 aa18.08■□□□□ 0.48
SMC4-209ENST00000468653 SLC38A3Q99624 504 aa18.08■□□□□ 0.48
SMC4-209ENST00000468653 TRIM15Q9C019 465 aa18.08■□□□□ 0.48
SMC4-209ENST00000468653 UCK1Q9HA47 277 aa18.08■□□□□ 0.48
SMC4-209ENST00000468653 STOML1Q9UBI4 398 aa18.08■□□□□ 0.48
SMC4-209ENST00000468653 BTNL2Q9UIR0 455 aa18.08■□□□□ 0.48
SMC4-209ENST00000468653 AP3M1Q9Y2T2 418 aa18.08■□□□□ 0.48
SMC4-209ENST00000468653 SNX11Q9Y5W9 270 aa18.08■□□□□ 0.48
SMC4-209ENST00000468653 A0A0J9YVX5 310 aa18.07■□□□□ 0.48
SMC4-209ENST00000468653 TMEM221A6NGB7 291 aa18.07■□□□□ 0.48
SMC4-209ENST00000468653 M0R296 226 aa18.07■□□□□ 0.48
SMC4-209ENST00000468653 CTSVO60911 334 aa18.07■□□□□ 0.48
SMC4-209ENST00000468653 GSTM5P46439 218 aa18.07■□□□□ 0.48
SMC4-209ENST00000468653 LSSP48449 732 aa18.07■□□□□ 0.48
SMC4-209ENST00000468653 MRPS22P82650 360 aaKnown RBP18.07■□□□□ 0.48
SMC4-209ENST00000468653 KLC1Q07866 573 aa18.07■□□□□ 0.48
SMC4-209ENST00000468653 TGM3Q08188 693 aa18.07■□□□□ 0.48
SMC4-209ENST00000468653 LRRC74AQ0VAA2 488 aa18.07■□□□□ 0.48
SMC4-209ENST00000468653 OGFOD3Q6PK18 319 aa18.07■□□□□ 0.48
SMC4-209ENST00000468653 ZNF621Q6ZSS3 439 aa18.07■□□□□ 0.48
SMC4-209ENST00000468653 BAHD1Q8TBE0 780 aaPredicted RBP18.07■□□□□ 0.48
SMC4-209ENST00000468653 THAP11Q96EK4 314 aa18.07■□□□□ 0.48
SMC4-209ENST00000468653 CCDC115Q96NT0 180 aa18.07■□□□□ 0.48
SMC4-209ENST00000468653 KCNC2Q96PR1 638 aa18.07■□□□□ 0.48
SMC4-209ENST00000468653 TEFMQ96QE5 360 aaKnown RBP18.07■□□□□ 0.48
SMC4-209ENST00000468653 MUC13Q9H3R2 512 aa18.07■□□□□ 0.48
SMC4-209ENST00000468653 SYNPO2LQ9H987 977 aa18.07■□□□□ 0.48
SMC4-209ENST00000468653 EVA1BQ9NVM1 165 aa18.07■□□□□ 0.48
SMC4-209ENST00000468653 KLK4Q9Y5K2 254 aa18.07■□□□□ 0.48
SMC4-209ENST00000468653 TECTAO75443 2155 aa18.07■□□□□ 0.48
SMC4-209ENST00000468653 LILRA5A6NI73 299 aa18.07■□□□□ 0.48
SMC4-209ENST00000468653 RNASET2O00584 256 aaKnown RBP18.07■□□□□ 0.48
SMC4-209ENST00000468653 TMPRSS11DO60235 418 aa18.07■□□□□ 0.48
SMC4-209ENST00000468653 SLC35G6P0C7Q6 338 aa18.07■□□□□ 0.48
SMC4-209ENST00000468653 HTR1EP28566 365 aa18.07■□□□□ 0.48
SMC4-209ENST00000468653 CTSKP43235 329 aa18.07■□□□□ 0.48
SMC4-209ENST00000468653 PPM1FP49593 454 aaPredicted RBP18.07■□□□□ 0.48
SMC4-209ENST00000468653 ARFIP1P53367 373 aa18.07■□□□□ 0.48
SMC4-209ENST00000468653 HEPACAMQ14CZ8 416 aa18.07■□□□□ 0.48
SMC4-209ENST00000468653 C14orf28Q4W4Y0 310 aa18.07■□□□□ 0.48
SMC4-209ENST00000468653 ZFP1Q6P2D0 407 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms