RNA–Protein interactions for RNA: ENST00000467819.5

COL9A3-207, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 1 (best)

Gene COL9A3, Length 993 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-207ENST00000467819 SAGE2PA6NJ88 616 aa19.74■□□□□ 0.75
COL9A3-207ENST00000467819 CES2O00748 559 aa19.74■□□□□ 0.75
COL9A3-207ENST00000467819 ZNHIT1O43257 154 aa19.74■□□□□ 0.75
COL9A3-207ENST00000467819 SLC25A12O75746 678 aa19.74■□□□□ 0.75
COL9A3-207ENST00000467819 COX6B1P14854 86 aa19.74■□□□□ 0.75
COL9A3-207ENST00000467819 RBBP5Q15291 538 aaKnown RBP19.74■□□□□ 0.75
COL9A3-207ENST00000467819 XKRXQ6PP77 449 aa19.74■□□□□ 0.75
COL9A3-207ENST00000467819 PDIK1LQ8N165 341 aa19.74■□□□□ 0.75
COL9A3-207ENST00000467819 AIF1LQ9BQI0 150 aa19.74■□□□□ 0.75
COL9A3-207ENST00000467819 WDR83Q9BRX9 315 aaKnown RBP19.74■□□□□ 0.75
COL9A3-207ENST00000467819 SLC6A16Q9GZN6 736 aa19.74■□□□□ 0.75
COL9A3-207ENST00000467819 KLHL31Q9H511 634 aa19.74■□□□□ 0.75
COL9A3-207ENST00000467819 PELI2Q9HAT8 420 aa19.74■□□□□ 0.75
COL9A3-207ENST00000467819 NPEPPSL1A6NEC2 478 aa19.73■□□□□ 0.75
COL9A3-207ENST00000467819 URADA6NGE7 173 aa19.73■□□□□ 0.75
COL9A3-207ENST00000467819 A8MUA0 341 aa19.73■□□□□ 0.75
COL9A3-207ENST00000467819 C4orf51C9J302 202 aa19.73■□□□□ 0.75
COL9A3-207ENST00000467819 PSMD12O00232 456 aaPredicted RBP19.73■□□□□ 0.75
COL9A3-207ENST00000467819 CDC7O00311 574 aa19.73■□□□□ 0.75
COL9A3-207ENST00000467819 RNH1P13489 461 aaKnown RBP19.73■□□□□ 0.75
COL9A3-207ENST00000467819 ELAVL4P26378 380 aaKnown RBP19.73■□□□□ 0.75
COL9A3-207ENST00000467819 IVDP26440 423 aa19.73■□□□□ 0.75
COL9A3-207ENST00000467819 SMSP52788 366 aa19.73■□□□□ 0.75
COL9A3-207ENST00000467819 HSF1Q00613 529 aa19.73■□□□□ 0.75
COL9A3-207ENST00000467819 PPP1R3AQ16821 1122 aa19.73■□□□□ 0.75
COL9A3-207ENST00000467819 TOR1AIP1Q5JTV8 583 aa19.73■□□□□ 0.75
COL9A3-207ENST00000467819 NXPE4Q6UWF7 544 aa19.73■□□□□ 0.75
COL9A3-207ENST00000467819 Q6ZPB1 254 aaPredicted RBP19.73■□□□□ 0.75
COL9A3-207ENST00000467819 NCCRP1Q6ZVX7 275 aaPredicted RBP19.73■□□□□ 0.75
COL9A3-207ENST00000467819 GDF7Q7Z4P5 450 aa19.73■□□□□ 0.75
COL9A3-207ENST00000467819 SIAH3Q8IW03 269 aa19.73■□□□□ 0.75
COL9A3-207ENST00000467819 TRPV3Q8NET8 790 aa19.73■□□□□ 0.75
COL9A3-207ENST00000467819 SLCO2A1Q92959 643 aa19.73■□□□□ 0.75
COL9A3-207ENST00000467819 PDLIM5Q96HC4 596 aaKnown RBP19.73■□□□□ 0.75
COL9A3-207ENST00000467819 NECTIN3Q9NQS3 549 aa19.73■□□□□ 0.75
COL9A3-207ENST00000467819 SLC22A14Q9Y267 594 aa19.73■□□□□ 0.75
COL9A3-207ENST00000467819 ASNA1O43681 348 aa19.72■□□□□ 0.75
COL9A3-207ENST00000467819 NME2P1O60361 137 aa19.72■□□□□ 0.75
COL9A3-207ENST00000467819 TACC2O95359 2948 aa19.72■□□□□ 0.75
COL9A3-207ENST00000467819 ABOP16442 354 aa19.72■□□□□ 0.75
COL9A3-207ENST00000467819 ZNF24P17028 368 aa19.72■□□□□ 0.75
COL9A3-207ENST00000467819 ZNF37AP17032 561 aaPredicted RBP19.72■□□□□ 0.75
COL9A3-207ENST00000467819 NME2P22392 152 aa19.72■□□□□ 0.75
COL9A3-207ENST00000467819 PTGER4P35408 488 aa19.72■□□□□ 0.75
COL9A3-207ENST00000467819 HYAL2Q12891 473 aa19.72■□□□□ 0.75
COL9A3-207ENST00000467819 ZNF460Q14592 562 aa19.72■□□□□ 0.75
COL9A3-207ENST00000467819 MORF4L2Q15014 288 aa19.72■□□□□ 0.75
COL9A3-207ENST00000467819 STEAP4Q687X5 459 aa19.72■□□□□ 0.75
COL9A3-207ENST00000467819 ANKMY2Q8IV38 441 aa19.72■□□□□ 0.75
COL9A3-207ENST00000467819 GHDCQ8N2G8 530 aa19.72■□□□□ 0.75
COL9A3-207ENST00000467819 CPSF7Q8N684 471 aaKnown RBP19.72■□□□□ 0.75
COL9A3-207ENST00000467819 ADAMTS18Q8TE60 1221 aa19.72■□□□□ 0.75
COL9A3-207ENST00000467819 EGFL8Q99944 293 aa19.72■□□□□ 0.75
COL9A3-207ENST00000467819 PRDM9Q9NQV7 894 aa19.72■□□□□ 0.75
COL9A3-207ENST00000467819 MEMO1Q9Y316 297 aa19.72■□□□□ 0.75
COL9A3-207ENST00000467819 PSAT1Q9Y617 370 aa19.72■□□□□ 0.75
COL9A3-207ENST00000467819 TEX264Q9Y6I9 313 aa19.72■□□□□ 0.75
COL9A3-207ENST00000467819 POLQO75417 2590 aa19.71■□□□□ 0.75
COL9A3-207ENST00000467819 TCRBV16S1A1N1A0A5B0 115 aa19.71■□□□□ 0.75
COL9A3-207ENST00000467819 CYB561P49447 251 aa19.71■□□□□ 0.75
COL9A3-207ENST00000467819 ITGA8P53708 1063 aa19.71■□□□□ 0.75
COL9A3-207ENST00000467819 MLF1P58340 268 aa19.71■□□□□ 0.75
COL9A3-207ENST00000467819 CDSNQ15517 529 aa19.71■□□□□ 0.75
COL9A3-207ENST00000467819 RNFT1Q5M7Z0 435 aa19.71■□□□□ 0.75
COL9A3-207ENST00000467819 ZNF227Q86WZ6 799 aa19.71■□□□□ 0.75
COL9A3-207ENST00000467819 KLHL7Q8IXQ5 586 aa19.71■□□□□ 0.75
COL9A3-207ENST00000467819 CA13Q8N1Q1 262 aa19.71■□□□□ 0.75
COL9A3-207ENST00000467819 ARMC2Q8NEN0 867 aa19.71■□□□□ 0.75
COL9A3-207ENST00000467819 TRIM51Q9BSJ1 452 aa19.71■□□□□ 0.75
COL9A3-207ENST00000467819 DEFB126Q9BYW3 111 aa19.71■□□□□ 0.75
COL9A3-207ENST00000467819 AICDAQ9GZX7 198 aa19.71■□□□□ 0.75
COL9A3-207ENST00000467819 ZFATQ9P243 1243 aa19.71■□□□□ 0.75
COL9A3-207ENST00000467819 KCNE2Q9Y6J6 123 aa19.71■□□□□ 0.75
COL9A3-207ENST00000467819 IGKV3D-11A0A0A0MRZ8 115 aa19.7■□□□□ 0.74
COL9A3-207ENST00000467819 A0A0G2JN53 185 aa19.7■□□□□ 0.74
COL9A3-207ENST00000467819 FAM95CA0A1B0GW59 222 aa19.7■□□□□ 0.74
COL9A3-207ENST00000467819 ZSCAN12O43309 604 aa19.7■□□□□ 0.74
COL9A3-207ENST00000467819 SMIM10L1P0DMW3 83 aa19.7■□□□□ 0.74
COL9A3-207ENST00000467819 AGAP20933 346 aa19.7■□□□□ 0.74
COL9A3-207ENST00000467819 C3P1Q6ZMU1 363 aa19.7■□□□□ 0.74
COL9A3-207ENST00000467819 NKAPQ8N5F7 415 aaKnown RBP19.7■□□□□ 0.74
COL9A3-207ENST00000467819 NFAM1Q8NET5 270 aaPredicted RBP19.7■□□□□ 0.74
COL9A3-207ENST00000467819 CREB3L4Q8TEY5 395 aa19.7■□□□□ 0.74
COL9A3-207ENST00000467819 AGAP11Q8TF27 550 aa19.7■□□□□ 0.74
COL9A3-207ENST00000467819 TMEM125Q96AQ2 219 aa19.7■□□□□ 0.74
COL9A3-207ENST00000467819 LRRC39Q96DD0 335 aa19.7■□□□□ 0.74
COL9A3-207ENST00000467819 SMIM10Q96HG1 83 aa19.7■□□□□ 0.74
COL9A3-207ENST00000467819 CAPZA3Q96KX2 299 aa19.7■□□□□ 0.74
COL9A3-207ENST00000467819 PHF12Q96QT6 1004 aa19.7■□□□□ 0.74
COL9A3-207ENST00000467819 CLK4Q9HAZ1 481 aaKnown RBP19.7■□□□□ 0.74
COL9A3-207ENST00000467819 GPAMQ9HCL2 828 aa19.7■□□□□ 0.74
COL9A3-207ENST00000467819 TRMT1Q9NXH9 659 aaKnown RBP19.7■□□□□ 0.74
COL9A3-207ENST00000467819 TRBV11-1A0A0K0K1C0 115 aa19.69■□□□□ 0.74
COL9A3-207ENST00000467819 C19orf84I3L1E1 186 aa19.69■□□□□ 0.74
COL9A3-207ENST00000467819 CDK2AP1O14519 115 aa19.69■□□□□ 0.74
COL9A3-207ENST00000467819 FCHO1O14526 889 aa19.69■□□□□ 0.74
COL9A3-207ENST00000467819 WDR47O94967 919 aa19.69■□□□□ 0.74
COL9A3-207ENST00000467819 CLDN14O95500 239 aa19.69■□□□□ 0.74
COL9A3-207ENST00000467819 SERPINA6P08185 405 aa19.69■□□□□ 0.74
COL9A3-207ENST00000467819 HLCSP50747 726 aa19.69■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms